RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 HSPD1P10809 573 aaKnown RBP27.71■■■□□ 2.03
CPNE9-204ENST00000491802 PPARAQ07869 468 aa27.71■■■□□ 2.03
CPNE9-204ENST00000491802 ERICH6BQ5W0A0 696 aa27.71■■■□□ 2.03
CPNE9-204ENST00000491802 CCDC17Q96LX7 622 aa27.71■■■□□ 2.03
CPNE9-204ENST00000491802 FEZ1Q99689 392 aa27.71■■■□□ 2.03
CPNE9-204ENST00000491802 MCOLN1Q9GZU1 580 aa27.71■■■□□ 2.03
CPNE9-204ENST00000491802 USP17L10C9JJH3 530 aa27.7■■■□□ 2.02
CPNE9-204ENST00000491802 C17orf99Q6UX52 265 aa27.7■■■□□ 2.02
CPNE9-204ENST00000491802 MKNK2Q9HBH9 465 aa27.7■■■□□ 2.02
CPNE9-204ENST00000491802 ALX1Q15699 326 aa27.69■■■□□ 2.02
CPNE9-204ENST00000491802 TREML2Q5T2D2 321 aa27.69■■■□□ 2.02
CPNE9-204ENST00000491802 TMOD4Q9NZQ9 345 aa27.69■■■□□ 2.02
CPNE9-204ENST00000491802 SLC3A2P08195 630 aaKnown RBP27.68■■■□□ 2.02
CPNE9-204ENST00000491802 RASA1P20936 1047 aa27.68■■■□□ 2.02
CPNE9-204ENST00000491802 CLEC10AQ8IUN9 316 aa27.68■■■□□ 2.02
CPNE9-204ENST00000491802 ACER1Q8TDN7 264 aa27.68■■■□□ 2.02
CPNE9-204ENST00000491802 PPP4R2Q9NY27 417 aa27.68■■■□□ 2.02
CPNE9-204ENST00000491802 ZMYM6O95789 1325 aa27.67■■■□□ 2.02
CPNE9-204ENST00000491802 GREB1LQ9C091 1923 aaPredicted RBP27.67■■■□□ 2.02
CPNE9-204ENST00000491802 PRDM1O75626 825 aa27.67■■■□□ 2.02
CPNE9-204ENST00000491802 PABPC4Q13310 644 aaKnown RBP eCLIP27.67■■■□□ 2.02
CPNE9-204ENST00000491802 ZYXQ15942 572 aaKnown RBP27.67■■■□□ 2.02
CPNE9-204ENST00000491802 ABHD8Q96I13 439 aa27.67■■■□□ 2.02
CPNE9-204ENST00000491802 IL25Q9H293 177 aa27.67■■■□□ 2.02
CPNE9-204ENST00000491802 ZNF287Q9HBT7 754 aa27.67■■■□□ 2.02
CPNE9-204ENST00000491802 PNMA3Q9UL41 463 aa27.67■■■□□ 2.02
CPNE9-204ENST00000491802 RAD50Q92878 1312 aa27.67■■■□□ 2.02
CPNE9-204ENST00000491802 FGAP02671 866 aa27.66■■■□□ 2.02
CPNE9-204ENST00000491802 CYP2C8P10632 490 aa27.66■■■□□ 2.02
CPNE9-204ENST00000491802 CHMLP26374 656 aa27.66■■■□□ 2.02
CPNE9-204ENST00000491802 ICA1Q05084 483 aa27.66■■■□□ 2.02
CPNE9-204ENST00000491802 C12orf42Q96LP6 360 aa27.66■■■□□ 2.02
CPNE9-204ENST00000491802 BCRP11274 1271 aa27.65■■■□□ 2.02
CPNE9-204ENST00000491802 HOXA7P31268 230 aaPredicted RBP27.65■■■□□ 2.02
CPNE9-204ENST00000491802 CTDSPL2Q05D32 466 aa27.65■■■□□ 2.02
CPNE9-204ENST00000491802 PDE4BQ07343 736 aa27.65■■■□□ 2.02
CPNE9-204ENST00000491802 ARHGEF6Q15052 776 aa27.65■■■□□ 2.02
CPNE9-204ENST00000491802 USP17L2Q6R6M4 530 aa27.65■■■□□ 2.02
CPNE9-204ENST00000491802 KIAA1683Q9H0B3 1180 aa27.65■■■□□ 2.02
CPNE9-204ENST00000491802 USP14P54578 494 aa27.64■■■□□ 2.02
CPNE9-204ENST00000491802 RUFY2Q8WXA3 655 aa27.64■■■□□ 2.02
CPNE9-204ENST00000491802 EMILIN3Q9NT22 766 aa27.64■■■□□ 2.02
CPNE9-204ENST00000491802 ANAPC4Q9UJX5 808 aa27.64■■■□□ 2.02
CPNE9-204ENST00000491802 A0A1W2PRG0 241 aa27.63■■■□□ 2.01
CPNE9-204ENST00000491802 LACTBP83111 547 aaPredicted RBP27.63■■■□□ 2.01
CPNE9-204ENST00000491802 BMP2KLQ5H9B9 411 aa27.63■■■□□ 2.01
CPNE9-204ENST00000491802 OTOP1Q7RTM1 612 aa27.63■■■□□ 2.01
CPNE9-204ENST00000491802 ZNF444Q8N0Y2 327 aaPredicted RBP27.63■■■□□ 2.01
CPNE9-204ENST00000491802 CD99L2Q8TCZ2 262 aa27.63■■■□□ 2.01
CPNE9-204ENST00000491802 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.63■■■□□ 2.01
CPNE9-204ENST00000491802 ARHGEF10LQ9HCE6 1279 aa27.63■■■□□ 2.01
CPNE9-204ENST00000491802 CPA4Q9UI42 421 aa27.63■■■□□ 2.01
CPNE9-204ENST00000491802 MGAMO43451 1857 aa27.62■■■□□ 2.01
CPNE9-204ENST00000491802 GNRH1P01148 92 aa27.62■■■□□ 2.01
CPNE9-204ENST00000491802 FBXO46Q6PJ61 603 aaPredicted RBP27.62■■■□□ 2.01
CPNE9-204ENST00000491802 SMCR8Q8TEV9 937 aaPredicted RBP27.62■■■□□ 2.01
CPNE9-204ENST00000491802 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.62■■■□□ 2.01
CPNE9-204ENST00000491802 HAND2P61296 217 aa27.61■■■□□ 2.01
CPNE9-204ENST00000491802 DSCC1Q9BVC3 393 aa27.61■■■□□ 2.01
CPNE9-204ENST00000491802 KANSL2Q9H9L4 492 aa27.61■■■□□ 2.01
CPNE9-204ENST00000491802 PLIN4Q96Q06 1357 aa27.6■■■□□ 2.01
CPNE9-204ENST00000491802 OSBPP22059 807 aa27.6■■■□□ 2.01
CPNE9-204ENST00000491802 CAP1Q01518 475 aa27.6■■■□□ 2.01
CPNE9-204ENST00000491802 ATP2B2Q01814 1243 aa27.6■■■□□ 2.01
CPNE9-204ENST00000491802 SIAH1Q8IUQ4 282 aa27.6■■■□□ 2.01
CPNE9-204ENST00000491802 ASCC2Q9H1I8 757 aaPredicted RBP27.6■■■□□ 2.01
CPNE9-204ENST00000491802 SH2D4AQ9H788 454 aa27.6■■■□□ 2.01
CPNE9-204ENST00000491802 EFCC1Q9HA90 598 aa27.6■■■□□ 2.01
CPNE9-204ENST00000491802 TRIM17Q9Y577 477 aa27.6■■■□□ 2.01
CPNE9-204ENST00000491802 EEF2P13639 858 aaKnown RBP27.59■■■□□ 2.01
CPNE9-204ENST00000491802 VCAM1P19320 739 aa27.59■■■□□ 2.01
CPNE9-204ENST00000491802 GCLCP48506 637 aaPredicted RBP27.59■■■□□ 2.01
CPNE9-204ENST00000491802 IRX3P78415 501 aaPredicted RBP27.59■■■□□ 2.01
CPNE9-204ENST00000491802 KIF22Q14807 665 aa27.59■■■□□ 2.01
CPNE9-204ENST00000491802 INCENPQ9NQS7 918 aa27.59■■■□□ 2.01
CPNE9-204ENST00000491802 LAMA4Q16363 1823 aa27.59■■■□□ 2.01
CPNE9-204ENST00000491802 ZSWIM8A7E2V4 1837 aa27.58■■■□□ 2.01
CPNE9-204ENST00000491802 TSPY3P0CV98 308 aa27.58■■■□□ 2.01
CPNE9-204ENST00000491802 TSPY8P0CW00 308 aa27.58■■■□□ 2.01
CPNE9-204ENST00000491802 FAM47AQ5JRC9 791 aa27.58■■■□□ 2.01
CPNE9-204ENST00000491802 TMX2Q9Y320 296 aa27.58■■■□□ 2.01
CPNE9-204ENST00000491802 TACC3Q9Y6A5 838 aa27.58■■■□□ 2.01
CPNE9-204ENST00000491802 IGKV6D-41A0A0C4DH26 115 aa27.57■■■□□ 2
CPNE9-204ENST00000491802 SGSM2O43147 1006 aa27.57■■■□□ 2
CPNE9-204ENST00000491802 TBC1D10CQ8IV04 446 aa27.57■■■□□ 2
CPNE9-204ENST00000491802 NBPF3Q9H094 633 aa27.57■■■□□ 2
CPNE9-204ENST00000491802 ORC4O43929 436 aa27.56■■■□□ 2
CPNE9-204ENST00000491802 PRMT2P55345 433 aa27.56■■■□□ 2
CPNE9-204ENST00000491802 TFAP4Q01664 338 aa27.56■■■□□ 2
CPNE9-204ENST00000491802 FAM110CQ1W6H9 321 aa27.56■■■□□ 2
CPNE9-204ENST00000491802 NEDD1Q8NHV4 660 aa27.56■■■□□ 2
CPNE9-204ENST00000491802 TOMM22Q9NS69 142 aa27.56■■■□□ 2
CPNE9-204ENST00000491802 PTPN22Q9Y2R2 807 aa27.56■■■□□ 2
CPNE9-204ENST00000491802 HTTP42858 3142 aa27.55■■■□□ 2
CPNE9-204ENST00000491802 TSPY2A6NKD2 308 aa27.55■■■□□ 2
CPNE9-204ENST00000491802 ZNF213O14771 459 aa27.55■■■□□ 2
CPNE9-204ENST00000491802 RRP12Q5JTH9 1297 aaKnown RBP27.55■■■□□ 2
CPNE9-204ENST00000491802 GTF3C2Q8WUA4 911 aaPredicted RBP27.55■■■□□ 2
CPNE9-204ENST00000491802 CEP95Q96GE4 821 aa27.55■■■□□ 2
CPNE9-204ENST00000491802 RPAP3Q9H6T3 665 aaPredicted RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms