RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 GPRC5AQ8NFJ5 357 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 ARHGAP45Q92619 1136 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 TRIM43Q96BQ3 446 aaPredicted RBP13.62□□□□□ -0.23
NCSTN-214ENST00000491390 P2RX7Q99572 595 aaKnown RBP13.62□□□□□ -0.23
NCSTN-214ENST00000491390 C1QTNF1Q9BXJ1 281 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 PORCNQ9H237 461 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 DNAJC18Q9H819 358 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 RBPJLQ9UBG7 517 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 MSCO60682 206 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
NCSTN-214ENST00000491390 DNAJB2P25686 324 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 HERVK_113P62684 666 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 DYNLL1P63167 89 aaKnown RBP13.61□□□□□ -0.23
NCSTN-214ENST00000491390 PDE3AQ14432 1141 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 C1orf53Q5VUE5 145 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 NAA16Q6N069 864 aaPredicted RBP13.61□□□□□ -0.23
NCSTN-214ENST00000491390 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 SLC39A5Q6ZMH5 540 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 SH3RF1Q7Z6J0 888 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 TMEM57Q8N5G2 664 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 FLRT1Q9NZU1 646 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 ATP11BQ9Y2G3 1177 aa13.61□□□□□ -0.23
NCSTN-214ENST00000491390 CYP2E1P05181 493 aaPredicted RBP13.6□□□□□ -0.23
NCSTN-214ENST00000491390 UQCRFS1P1P0C7P4 283 aa13.6□□□□□ -0.23
NCSTN-214ENST00000491390 ITGB8P26012 769 aa13.6□□□□□ -0.23
NCSTN-214ENST00000491390 ZAP70P43403 619 aa13.6□□□□□ -0.23
NCSTN-214ENST00000491390 IRX3P78415 501 aaPredicted RBP13.6□□□□□ -0.23
NCSTN-214ENST00000491390 MRPS5P82675 430 aaKnown RBP13.6□□□□□ -0.23
NCSTN-214ENST00000491390 OS9Q13438 667 aaPredicted RBP13.6□□□□□ -0.23
NCSTN-214ENST00000491390 Q3C1V9 767 aa13.6□□□□□ -0.23
NCSTN-214ENST00000491390 TNNI3KQ59H18 835 aa13.6□□□□□ -0.23
NCSTN-214ENST00000491390 RNPC3Q96LT9 517 aaKnown RBP13.6□□□□□ -0.23
NCSTN-214ENST00000491390 NOL10Q9BSC4 688 aaKnown RBP13.6□□□□□ -0.23
NCSTN-214ENST00000491390 PIH1D3Q9NQM4 214 aaKnown RBP13.6□□□□□ -0.23
NCSTN-214ENST00000491390 TLR7Q9NYK1 1049 aaKnown RBP13.6□□□□□ -0.23
NCSTN-214ENST00000491390 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
NCSTN-214ENST00000491390 NDUFB9Q9Y6M9 179 aa13.6□□□□□ -0.23
NCSTN-214ENST00000491390 FPGT-TNNI3KV9GXZ4 949 aa13.6□□□□□ -0.23
NCSTN-214ENST00000491390 FLT1P17948 1338 aa13.6□□□□□ -0.23
NCSTN-214ENST00000491390 HOXC6P09630 235 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 ERVK-9P63128 1117 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 ERVK-24P63145 666 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 MAP2K5Q13163 448 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 TRIM60Q495X7 471 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 PLEKHH3Q7Z736 793 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 TRPV1Q8NER1 839 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 WDR18Q9BV38 432 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 ZNF576Q9H609 170 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 AS3MTQ9HBK9 375 aa13.59□□□□□ -0.23
NCSTN-214ENST00000491390 IPO8O15397 1037 aaKnown RBP13.58□□□□□ -0.24
NCSTN-214ENST00000491390 BACE1P56817 501 aa13.58□□□□□ -0.24
NCSTN-214ENST00000491390 ZYXQ15942 572 aaKnown RBP13.58□□□□□ -0.24
NCSTN-214ENST00000491390 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
NCSTN-214ENST00000491390 MIGA1Q8NAN2 632 aa13.58□□□□□ -0.24
NCSTN-214ENST00000491390 PAGR1Q9BTK6 254 aa13.58□□□□□ -0.24
NCSTN-214ENST00000491390 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
NCSTN-214ENST00000491390 PRDM5Q9NQX1 630 aaPredicted RBP13.58□□□□□ -0.24
NCSTN-214ENST00000491390 TMOD4Q9NZQ9 345 aa13.58□□□□□ -0.24
NCSTN-214ENST00000491390 HERC5Q9UII4 1024 aaKnown RBP13.58□□□□□ -0.24
NCSTN-214ENST00000491390 CACNA1AO00555 2505 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 SURF6O75683 361 aaKnown RBP13.57□□□□□ -0.24
NCSTN-214ENST00000491390 BAG3O95817 575 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 MAP4K4O95819 1239 aaPredicted RBP13.57□□□□□ -0.24
NCSTN-214ENST00000491390 CYBAP13498 195 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 CYP7A1P22680 504 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 POLA2Q14181 598 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 CCDC158Q5M9N0 1113 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 MFSD14CQ5VZR4 134 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 LRFN3Q9BTN0 628 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 TRIM34Q9BYJ4 488 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 ZBTB21Q9ULJ3 1066 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 FOCADQ5VW36 1801 aa13.57□□□□□ -0.24
NCSTN-214ENST00000491390 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.56□□□□□ -0.24
NCSTN-214ENST00000491390 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.56□□□□□ -0.24
NCSTN-214ENST00000491390 ASNSP08243 561 aa13.56□□□□□ -0.24
NCSTN-214ENST00000491390 BMP1P13497 986 aa13.56□□□□□ -0.24
NCSTN-214ENST00000491390 PPP4CP60510 307 aa13.56□□□□□ -0.24
NCSTN-214ENST00000491390 ADGRE1Q14246 886 aa13.56□□□□□ -0.24
NCSTN-214ENST00000491390 GJC2Q5T442 439 aaPredicted RBP13.56□□□□□ -0.24
NCSTN-214ENST00000491390 GTF3C2Q8WUA4 911 aaPredicted RBP13.56□□□□□ -0.24
NCSTN-214ENST00000491390 TIFAQ96CG3 184 aa13.56□□□□□ -0.24
NCSTN-214ENST00000491390 EDC3Q96F86 508 aaKnown RBP13.56□□□□□ -0.24
NCSTN-214ENST00000491390 NECAB3Q96P71 396 aaPredicted RBP13.56□□□□□ -0.24
NCSTN-214ENST00000491390 DHX36Q9H2U1 1008 aaKnown RBP13.56□□□□□ -0.24
NCSTN-214ENST00000491390 EMILIN3Q9NT22 766 aa13.56□□□□□ -0.24
NCSTN-214ENST00000491390 DBNLQ9UJU6 430 aaKnown RBP13.56□□□□□ -0.24
NCSTN-214ENST00000491390 HCN4Q9Y3Q4 1203 aa13.56□□□□□ -0.24
NCSTN-214ENST00000491390 MYH1P12882 1939 aa13.55□□□□□ -0.24
NCSTN-214ENST00000491390 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
NCSTN-214ENST00000491390 KIAA0355O15063 1070 aa13.55□□□□□ -0.24
NCSTN-214ENST00000491390 CNMDO75829 334 aa13.55□□□□□ -0.24
NCSTN-214ENST00000491390 IDH1O75874 414 aaKnown RBP13.55□□□□□ -0.24
NCSTN-214ENST00000491390 GH2P01242 217 aa13.55□□□□□ -0.24
NCSTN-214ENST00000491390 PLCG2P16885 1265 aa13.55□□□□□ -0.24
NCSTN-214ENST00000491390 ATP8B2P98198 1209 aa13.55□□□□□ -0.24
NCSTN-214ENST00000491390 ARRDC4Q8NCT1 418 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms