RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	SLC4A9	Q96Q91	983 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	CTAGE1	Q96RT6	745 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	LRRC2	Q9BYS8	371 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	LY9	Q9HBG7	655 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	PIH1D3	Q9NQM4	214 aa	Known RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	TOMM22	Q9NS69	142 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	NDUFB9	Q9Y6M9	179 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	BCL9L	Q86UU0	1499 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	SLIT2	O94813	1529 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	NUP98	P52948	1817 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	TCHH	Q07283	1943 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833		B4E1Z4	1266 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	LAD1	O00515	517 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	NPHP1	O15259	732 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	ANTXR2	P58335	489 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	ORC2	Q13416	577 aa	Predicted RBP	7.27	□□□□□ -1.25
FN1-223	ENST00000490833	SCARF1	Q14162	830 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	IQCB1	Q15051	598 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	NTRK3	Q16288	839 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	TRAPPC3L	Q5T215	181 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	IFIT1B	Q5T764	474 aa	Known RBP	7.27	□□□□□ -1.25
FN1-223	ENST00000490833	ZNF804A	Q7Z570	1209 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	TEX2	Q8IWB9	1127 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	CKAP2L	Q8IYA6	745 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	CNNM3	Q8NE01	707 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	MYRIP	Q8NFW9	859 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	TBC1D22A	Q8WUA7	517 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	NGLY1	Q96IV0	654 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.27	□□□□□ -1.25
FN1-223	ENST00000490833	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.27	□□□□□ -1.25
FN1-223	ENST00000490833	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.27	□□□□□ -1.25
FN1-223	ENST00000490833	TMX4	Q9H1E5	349 aa	Predicted RBP	7.27	□□□□□ -1.25
FN1-223	ENST00000490833	NCOA5	Q9HCD5	579 aa	Known RBP	7.27	□□□□□ -1.25
FN1-223	ENST00000490833	TSR3	Q9UJK0	312 aa	Known RBP	7.27	□□□□□ -1.25
FN1-223	ENST00000490833	TUBE1	Q9UJT0	475 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	MINPP1	Q9UNW1	487 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	SUGT1	Q9Y2Z0	365 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	SRPRB	Q9Y5M8	271 aa	Known RBP	7.27	□□□□□ -1.25
FN1-223	ENST00000490833	ROBO1	Q9Y6N7	1651 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	LRP5	O75197	1615 aa		7.27	□□□□□ -1.25
FN1-223	ENST00000490833	TRIM75P	A6NK02	468 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	hCG_1984214	I3L0E3	225 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	FOXP2	O15409	715 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	BBOX1	O75936	387 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	ADAMTS2	O95450	1211 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	POLR3D	P05423	398 aa	Predicted RBP	7.26	□□□□□ -1.25
FN1-223	ENST00000490833	ERCC5	P28715	1186 aa	Predicted RBP	7.26	□□□□□ -1.25
FN1-223	ENST00000490833	RFC4	P35249	363 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	TXLNA	P40222	546 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	SLC27A3	Q5K4L6	730 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	RESP18	Q5W5W9	173 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	ARL6IP4	Q66PJ3	421 aa	Known RBP	7.26	□□□□□ -1.25
FN1-223	ENST00000490833	PACS2	Q86VP3	889 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	FCHSD1	Q86WN1	690 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	MICU3	Q86XE3	530 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	ZNF654	Q8IZM8	581 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	ZNF713	Q8N859	430 aa	Predicted RBP	7.26	□□□□□ -1.25
FN1-223	ENST00000490833	ANKRD20A12P	Q8NF67	263 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	CCDC148	Q8NFR7	591 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	ANKS1A	Q92625	1134 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	SLC26A6	Q9BXS9	759 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	OSBPL5	Q9H0X9	879 aa	Predicted RBP	7.26	□□□□□ -1.25
FN1-223	ENST00000490833	DNAJC25	Q9H1X3	360 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	TCP11L1	Q9NUJ3	509 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	RMND1	Q9NWS8	449 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	ABCF2	Q9UG63	623 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	KCNH3	Q9ULD8	1083 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	HPSE	Q9Y251	543 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.26	□□□□□ -1.25
FN1-223	ENST00000490833	TAF6L	Q9Y6J9	622 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	MYH7	P12883	1935 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	TOGARAM1	Q9Y4F4	1720 aa		7.26	□□□□□ -1.25
FN1-223	ENST00000490833	RREB1	Q92766	1687 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	ARAP2	Q8WZ64	1704 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	ZSCAN12	O43309	604 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	TPM1	P09493	284 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	ATP2B4	P23634	1241 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	KRT2	P35908	639 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	NDUFA8	P51970	172 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	PPP4C	P60510	307 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	MYL5	Q02045	173 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	CEBPZ	Q03701	1054 aa	Known RBP	7.25	□□□□□ -1.25
FN1-223	ENST00000490833	EN1	Q05925	392 aa	Predicted RBP	7.25	□□□□□ -1.25
FN1-223	ENST00000490833	TUBB2A	Q13885	445 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	TSR1	Q2NL82	804 aa	Known RBP	7.25	□□□□□ -1.25
FN1-223	ENST00000490833	FILIP1L	Q4L180	1135 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.25	□□□□□ -1.25
FN1-223	ENST00000490833	NT5DC1	Q5TFE4	455 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	FAM173B	Q6P4H8	233 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	CHST3	Q7LGC8	479 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	CCDC186	Q7Z3E2	898 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	LUZP1	Q86V48	1076 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	TBC1D10C	Q8IV04	446 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	CCDC47	Q96A33	483 aa	Known RBP	7.25	□□□□□ -1.25
FN1-223	ENST00000490833	FAM84B	Q96KN1	310 aa	Predicted RBP	7.25	□□□□□ -1.25
FN1-223	ENST00000490833	GSDMA	Q96QA5	445 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	TUBB2B	Q9BVA1	445 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	SRRT	Q9BXP5	876 aa	Known RBP	7.25	□□□□□ -1.25
FN1-223	ENST00000490833	GLT8D2	Q9H1C3	349 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	ARMT1	Q9H993	441 aa		7.25	□□□□□ -1.25

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