RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 NAPBQ9H115 298 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 NUCKS1Q9H1E3 243 aaKnown RBP11.51□□□□□ -0.57
BRD9-209ENST00000490814 PLEKHA4Q9H4M7 779 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 HOOK1Q9UJC3 728 aaKnown RBP11.51□□□□□ -0.57
BRD9-209ENST00000490814 NFE2L3Q9Y4A8 694 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 VWA3AA6NCI4 1184 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 AFMP43652 599 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 RBM5P52756 815 aaKnown RBP eCLIP11.51□□□□□ -0.575e-8■■■□□ 16
BRD9-209ENST00000490814 SSRP1Q08945 709 aaKnown RBP11.51□□□□□ -0.57
BRD9-209ENST00000490814 EZH2Q15910 746 aaKnown RBP11.51□□□□□ -0.57
BRD9-209ENST00000490814 BARGINQ6ZT62 677 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 CRYBG1Q9Y4K1 1723 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 SNAP23O00161 211 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 ARHGAP6O43182 974 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 APOA5Q6Q788 366 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 MIEF2Q96C03 454 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 GPR108Q9NPR9 543 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 ZNF532Q9HCE3 1301 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 PES1O00541 588 aaKnown RBP11.5□□□□□ -0.57
BRD9-209ENST00000490814 INHBEP58166 350 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 GBP6Q6ZN66 633 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 TADA2BQ86TJ2 420 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 CCDC24Q8N4L8 307 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 hCG_1642624A0A1W2PR95 340 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 COBLO75128 1261 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 MCAMP43121 646 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 PDE4BQ07343 736 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 KIF4BQ2VIQ3 1234 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 TOGARAM2Q6ZUX3 1019 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 RABGGTAQ92696 567 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 FAN1Q9Y2M0 1017 aa11.5□□□□□ -0.57
BRD9-209ENST00000490814 CHMP4BP1P59074 171 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 FOXR1Q6PIV2 292 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 TRIM22Q8IYM9 498 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 KRI1Q8N9T8 703 aaKnown RBP11.49□□□□□ -0.57
BRD9-209ENST00000490814 FAXDC2Q96IV6 333 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 SUGCTQ9HAC7 445 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 IRAK4Q9NWZ3 460 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 SERTAD1Q9UHV2 236 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 IQSEC3Q9UPP2 1182 aaPredicted RBP11.49□□□□□ -0.57
BRD9-209ENST00000490814 ZMYM6O95789 1325 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 FOXP2O15409 715 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 N4BP1O75113 896 aaKnown RBP11.49□□□□□ -0.57
BRD9-209ENST00000490814 EIF3JO75822 258 aaKnown RBP11.49□□□□□ -0.57
BRD9-209ENST00000490814 ITGA6P23229 1130 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 TXLNAP40222 546 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 KCNJ6P48051 423 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 MAP3K9P80192 1104 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 MSL1Q68DK7 614 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 METTL16Q86W50 562 aaKnown RBP11.49□□□□□ -0.57
BRD9-209ENST00000490814 DIS3L2Q8IYB7 885 aaKnown RBP11.49□□□□□ -0.57
BRD9-209ENST00000490814 GREM2Q9H772 168 aa11.49□□□□□ -0.57
BRD9-209ENST00000490814 ERICH2A1L162 156 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 IKBKBO14920 756 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 CAND2O75155 1236 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 ERLIN1O75477 346 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 AKAP17AQ02040 695 aaKnown RBP11.48□□□□□ -0.57
BRD9-209ENST00000490814 GRIN1Q05586 938 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 AP1ARQ63HQ0 302 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 STAMQ92783 540 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 TACO1Q9BSH4 297 aaKnown RBP11.48□□□□□ -0.57
BRD9-209ENST00000490814 UBXN6Q9BZV1 441 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 PIH1D3Q9NQM4 214 aaKnown RBP11.48□□□□□ -0.57
BRD9-209ENST00000490814 SLIT2O94813 1529 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 MINDY4BA8MYZ0 360 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 ERCC3P19447 782 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 PHKA1P46020 1223 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 FMNL3Q8IVF7 1028 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 VSTM4Q8IW00 320 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 PRPF38AQ8NAV1 312 aaKnown RBP11.48□□□□□ -0.57
BRD9-209ENST00000490814 PIK3R5Q8WYR1 880 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 BPIFA3Q9BQP9 254 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 ARMT1Q9H993 441 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 TRMT112Q9UI30 125 aaKnown RBP11.48□□□□□ -0.57
BRD9-209ENST00000490814 MRFAP1Q9Y605 127 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 N4BP2Q86UW6 1770 aaPredicted RBP11.48□□□□□ -0.57
BRD9-209ENST00000490814 LOC102724428A0A0B4J2F2 783 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 GNPATO15228 680 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 MBD4O95243 580 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 CASP1P29466 404 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 BAG6P46379 1132 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 SIK1P57059 783 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 NR5A1Q13285 461 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 HDXQ7Z353 690 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 PPFIBP1Q86W92 1011 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 FOXP4Q8IVH2 680 aaPredicted RBP11.48□□□□□ -0.57
BRD9-209ENST00000490814 MAGEB6Q8N7X4 407 aa11.48□□□□□ -0.57
BRD9-209ENST00000490814 SAMSN1Q9NSI8 373 aaKnown RBP11.48□□□□□ -0.57
BRD9-209ENST00000490814 NEDD4P46934 1319 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 A0A087WUV0 522 aaPredicted RBP11.47□□□□□ -0.57
BRD9-209ENST00000490814 GOLGA6L9A6NEM1 432 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 CIAO1O76071 339 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 GUCY1A2P33402 732 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 TCIRG1Q13488 830 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 POSTNQ15063 836 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms