RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 ZMYND8Q9ULU4 1186 aaPredicted RBP14.32□□□□□ -0.12
FDPS-215ENST00000490140 MYO5AQ9Y4I1 1855 aaKnown RBP14.31□□□□□ -0.12
FDPS-215ENST00000490140 CACNB2Q08289 660 aaPredicted RBP14.31□□□□□ -0.12
FDPS-215ENST00000490140 MAP2K5Q13163 448 aa14.31□□□□□ -0.12
FDPS-215ENST00000490140 LRIT3Q3SXY7 679 aa14.31□□□□□ -0.12
FDPS-215ENST00000490140 MORN1Q5T089 497 aa14.31□□□□□ -0.12
FDPS-215ENST00000490140 LBX2Q6XYB7 198 aa14.31□□□□□ -0.12
FDPS-215ENST00000490140 TDHQ8IZJ6 230 aa14.31□□□□□ -0.12
FDPS-215ENST00000490140 MIGA1Q8NAN2 632 aa14.31□□□□□ -0.12
FDPS-215ENST00000490140 SLC17A8Q8NDX2 589 aa14.31□□□□□ -0.12
FDPS-215ENST00000490140 USP6NLQ92738 828 aa14.31□□□□□ -0.12
FDPS-215ENST00000490140 EMILIN3Q9NT22 766 aa14.31□□□□□ -0.12
FDPS-215ENST00000490140 COL6A3P12111 3177 aa14.3□□□□□ -0.12
FDPS-215ENST00000490140 SLC15A5A6NIM6 579 aa14.3□□□□□ -0.12
FDPS-215ENST00000490140 VCAM1P19320 739 aa14.3□□□□□ -0.12
FDPS-215ENST00000490140 DYNLL1P63167 89 aaKnown RBP14.3□□□□□ -0.12
FDPS-215ENST00000490140 ZYXQ15942 572 aaKnown RBP14.3□□□□□ -0.12
FDPS-215ENST00000490140 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
FDPS-215ENST00000490140 UBE2OQ9C0C9 1292 aaKnown RBP14.3□□□□□ -0.12
FDPS-215ENST00000490140 CCDC8Q9H0W5 538 aaPredicted RBP14.3□□□□□ -0.12
FDPS-215ENST00000490140 PORCNQ9H237 461 aa14.3□□□□□ -0.12
FDPS-215ENST00000490140 TNNQ9UQP3 1299 aa14.3□□□□□ -0.12
FDPS-215ENST00000490140 CUL9Q8IWT3 2517 aa14.3□□□□□ -0.12
FDPS-215ENST00000490140 NAV1Q8NEY1 1877 aa14.29□□□□□ -0.12
FDPS-215ENST00000490140 POLR3DP05423 398 aaPredicted RBP14.29□□□□□ -0.12
FDPS-215ENST00000490140 MS4A1P11836 297 aa14.29□□□□□ -0.12
FDPS-215ENST00000490140 MAGEA10P43363 369 aaPredicted RBP14.29□□□□□ -0.12
FDPS-215ENST00000490140 JAG1P78504 1218 aa14.29□□□□□ -0.12
FDPS-215ENST00000490140 AACSQ86V21 672 aa14.29□□□□□ -0.12
FDPS-215ENST00000490140 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
FDPS-215ENST00000490140 EDC3Q96F86 508 aaKnown RBP14.29□□□□□ -0.12
FDPS-215ENST00000490140 C1orf115Q9H7X2 142 aa14.29□□□□□ -0.12
FDPS-215ENST00000490140 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
FDPS-215ENST00000490140 TLR7Q9NYK1 1049 aaKnown RBP14.29□□□□□ -0.12
FDPS-215ENST00000490140 PRKAG2Q9UGJ0 569 aa14.29□□□□□ -0.12
FDPS-215ENST00000490140 A0A0C4DFX4 3053 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 MAGEB6P1A0A0J9YX57 407 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 SOX1O00570 391 aaPredicted RBP14.28□□□□□ -0.12
FDPS-215ENST00000490140 PFASO15067 1338 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 HOXC6P09630 235 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 COL6A1P12109 1028 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 SYN1P17600 705 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
FDPS-215ENST00000490140 ATP2B2Q01814 1243 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 CATSPERGQ6ZRH7 1159 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 AMOTL1Q8IY63 956 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 LRCH3Q96II8 777 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 LBHD1Q9BQE6 289 aaPredicted RBP14.28□□□□□ -0.12
FDPS-215ENST00000490140 SH2D4AQ9H788 454 aa14.28□□□□□ -0.12
FDPS-215ENST00000490140 FRMPD3Q5JV73 1810 aa14.27□□□□□ -0.12
FDPS-215ENST00000490140 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
FDPS-215ENST00000490140 PTPREP23469 700 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 CCND3P30281 292 aaPredicted RBP14.27□□□□□ -0.13
FDPS-215ENST00000490140 GRB14Q14449 540 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 CCL14Q16627 93 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 SHROOM1Q2M3G4 852 aaPredicted RBP14.27□□□□□ -0.13
FDPS-215ENST00000490140 Q3C1V9 767 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 CEP85Q6P2H3 762 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 CLASRPQ8N2M8 674 aaKnown RBP14.27□□□□□ -0.13
FDPS-215ENST00000490140 DEFB123Q8N688 67 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 MB21D1Q8N884 522 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 RPAP3Q9H6T3 665 aaPredicted RBP14.27□□□□□ -0.13
FDPS-215ENST00000490140 HOXC10Q9NYD6 342 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 SWAP70Q9UH65 585 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 ZNF236Q9UL36 1845 aa14.27□□□□□ -0.13
FDPS-215ENST00000490140 DNM1LO00429 736 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 STRNO43815 780 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 HMMRO75330 724 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 CNGA1P29973 690 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
FDPS-215ENST00000490140 LHX8Q68G74 356 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 LPAR1Q92633 364 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 DDRGK1Q96HY6 314 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 TANGO6Q9C0B7 1094 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 MCM9Q9NXL9 1143 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 DDX20Q9UHI6 824 aaKnown RBP14.26□□□□□ -0.13
FDPS-215ENST00000490140 DNAH12Q6ZR08 3092 aa14.26□□□□□ -0.13
FDPS-215ENST00000490140 SPDYE16A6NNV3 312 aaPredicted RBP14.25□□□□□ -0.13
FDPS-215ENST00000490140 PEX10O60683 326 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 SHMT1P34896 483 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 COG2Q14746 738 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 SLC9C2Q5TAH2 1124 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 TMEM179Q6ZVK1 233 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 DPP9Q86TI2 863 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 ARRDC4Q8NCT1 418 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 SHCBP1Q8NEM2 672 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.25□□□□□ -0.13
FDPS-215ENST00000490140 RIOK1Q9BRS2 568 aaKnown RBP14.25□□□□□ -0.13
FDPS-215ENST00000490140 CHMP4BQ9H444 224 aaKnown RBP14.25□□□□□ -0.13
FDPS-215ENST00000490140 ARHGEF10LQ9HCE6 1279 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 EXOC6BQ9Y2D4 811 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 MYH8P13535 1937 aa14.25□□□□□ -0.13
FDPS-215ENST00000490140 KBTBD13C9JR72 458 aa14.24□□□□□ -0.13
FDPS-215ENST00000490140 DLL1O00548 723 aa14.24□□□□□ -0.13
FDPS-215ENST00000490140 CNMDO75829 334 aa14.24□□□□□ -0.13
FDPS-215ENST00000490140 IFIT2P09913 472 aaKnown RBP14.24□□□□□ -0.13
FDPS-215ENST00000490140 PDE6AP16499 860 aa14.24□□□□□ -0.13
FDPS-215ENST00000490140 LRRC26Q2I0M4 334 aa14.24□□□□□ -0.13
FDPS-215ENST00000490140 OLFML2BQ68BL8 750 aa14.24□□□□□ -0.13
FDPS-215ENST00000490140 KIF1BPQ96EK5 621 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 741.9 ms