RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 SPRYD7Q5W111 196 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 DESI1Q6ICB0 168 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 NUDT18Q6ZVK8 323 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 WDR75Q8IWA0 830 aaKnown RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 NKX2-3Q8TAU0 364 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 RBM17Q96I25 401 aaKnown RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 GUCD1Q96NT3 240 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 CRAMP1Q96RY5 1269 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 MPHOSPH6Q99547 160 aaKnown RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 NAP1L4Q99733 375 aaKnown RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 GDF15Q99988 308 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 BMP2KQ9NSY1 1161 aaPredicted RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 MAP3K20Q9NYL2 800 aaKnown RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 NIP7Q9Y221 180 aaKnown RBP eCLIP5.5□□□□□ -1.53
RTN1-207ENST00000490111 ZNF652Q9Y2D9 606 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 RBM19Q9Y4C8 960 aaKnown RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 AK5Q9Y6K8 562 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 MKI67P46013 3256 aaKnown RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 ASTN2O75129 1339 aaPredicted RBP5.49□□□□□ -1.53
RTN1-207ENST00000490111 PSMD14O00487 310 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 A1BGP04217 495 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 HCLS1P14317 486 aaPredicted RBP5.49□□□□□ -1.53
RTN1-207ENST00000490111 RPS12P25398 132 aaKnown RBP5.49□□□□□ -1.53
RTN1-207ENST00000490111 PIP4K2AP48426 406 aaPredicted RBP5.49□□□□□ -1.53
RTN1-207ENST00000490111 LMOD3Q0VAK6 560 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 NFX1Q12986 1120 aaKnown RBP5.49□□□□□ -1.53
RTN1-207ENST00000490111 CRHR2Q13324 411 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 RAB33AQ14088 237 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 SYCP2LQ5T4T6 812 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 TTC39BQ5VTQ0 682 aaPredicted RBP5.49□□□□□ -1.53
RTN1-207ENST00000490111 FAM109BQ6ICB4 259 aaPredicted RBP5.49□□□□□ -1.53
RTN1-207ENST00000490111 DPP8Q6V1X1 898 aaPredicted RBP5.49□□□□□ -1.53
RTN1-207ENST00000490111 HOMER1Q86YM7 354 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 TTC5Q8N0Z6 440 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 ZDHHC16Q969W1 377 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 ZNF496Q96IT1 587 aaPredicted RBP5.49□□□□□ -1.53
RTN1-207ENST00000490111 SEC16BQ96JE7 1060 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 HINFPQ9BQA5 517 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 ARNT2Q9HBZ2 717 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 NEUROD4Q9HD90 331 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 CASS4Q9NQ75 786 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 CHST12Q9NRB3 414 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 NRBP1Q9UHY1 535 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 GGT7Q9UJ14 662 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 ATP6V0A2Q9Y487 856 aa5.49□□□□□ -1.53
RTN1-207ENST00000490111 IRS2Q9Y4H2 1338 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 UBR2Q8IWV8 1755 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 NBPF26B4DH59 902 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 POTEB2H3BUK9 544 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 IGF2BP3O00425 579 aaKnown RBP eCLIP5.48□□□□□ -1.53
RTN1-207ENST00000490111 RNMTO43148 476 aaKnown RBP5.48□□□□□ -1.53
RTN1-207ENST00000490111 SSBP05455 408 aaKnown RBP eCLIP5.48□□□□□ -1.53
RTN1-207ENST00000490111 EIF1AXP47813 144 aaKnown RBP5.48□□□□□ -1.53
RTN1-207ENST00000490111 IRX5P78411 483 aaPredicted RBP5.48□□□□□ -1.53
RTN1-207ENST00000490111 SCARF1Q14162 830 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 ZRSR2Q15696 482 aaKnown RBP5.48□□□□□ -1.53
RTN1-207ENST00000490111 OTUD7BQ6GQQ9 843 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 ZNF280DQ6N043 979 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 LYPD8Q6UX82 237 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 ANKS3Q6ZW76 656 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 MORC1Q86VD1 984 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 TDHQ8IZJ6 230 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 LILRB2Q8N423 598 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 MAFAQ8NHW3 353 aaPredicted RBP5.48□□□□□ -1.53
RTN1-207ENST00000490111 FBF1Q8TES7 1133 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 CEP63Q96MT8 703 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 ARPC5LQ9BPX5 153 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 ADAM33Q9BZ11 813 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 PCDHB9Q9Y5E1 797 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 PCDHGA11Q9Y5H2 935 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 SPTBN5Q9NRC6 3674 aaKnown RBP5.48□□□□□ -1.53
RTN1-207ENST00000490111 UNC80Q8N2C7 3258 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 RIC1Q4ADV7 1423 aa5.48□□□□□ -1.53
RTN1-207ENST00000490111 ZNF646O15015 1829 aaPredicted RBP5.47□□□□□ -1.53
RTN1-207ENST00000490111 M0R2N6 131 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 FOSP01100 380 aaPredicted RBP5.47□□□□□ -1.53
RTN1-207ENST00000490111 KRT18P05783 430 aaKnown RBP5.47□□□□□ -1.53
RTN1-207ENST00000490111 GJB1P08034 283 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 IL13P35225 146 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 NF2P35240 595 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 MTFR1Q15390 333 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 MTHFSDQ2M296 383 aaKnown RBP5.47□□□□□ -1.53
RTN1-207ENST00000490111 TJAP1Q5JTD0 557 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 PRAMEF18Q5VWM3 479 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 ALYREFQ86V81 257 aaKnown RBP5.47□□□□□ -1.53
RTN1-207ENST00000490111 RETREG3Q86VR2 466 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 JAMLQ86YT9 394 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 SP8Q8IXZ3 490 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 TSEN2Q8NCE0 465 aaKnown RBP5.47□□□□□ -1.53
RTN1-207ENST00000490111 PPM1EQ8WY54 764 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 FEZ1Q99689 392 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 OCSTAMPQ9BR26 566 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 TRIM55Q9BYV6 548 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 INO80BQ9C086 356 aaPredicted RBP5.47□□□□□ -1.53
RTN1-207ENST00000490111 NIF3L1Q9GZT8 377 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 NYXQ9GZU5 481 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 ZNF700Q9H0M5 742 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 TMEM260Q9NX78 707 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 DOLKQ9UPQ8 538 aa5.47□□□□□ -1.53
RTN1-207ENST00000490111 GPSM3Q9Y4H4 160 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms