RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 USP17L15C9J2P7 530 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 USP17L13C9JLJ4 530 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 USP17L11C9JVI0 530 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 USP17L18D6R9N7 530 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 USP17L22D6RA61 530 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 USP17L17D6RBQ6 530 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 USP17L19D6RCP7 530 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 USP17L20D6RJB6 530 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 CNMDO75829 334 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 SYN1P17600 705 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 CCND3P30281 292 aaPredicted RBP19.32■□□□□ 0.68
PLOD3-216ENST00000489927 BMP8BP34820 402 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
PLOD3-216ENST00000489927 USP17L24Q0WX57 530 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 ABCB5Q2M3G0 1257 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 CERKLQ49MI3 558 aaPredicted RBP19.32■□□□□ 0.68
PLOD3-216ENST00000489927 TTC6Q86TZ1 520 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 AACSQ86V21 672 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 APBA2Q99767 749 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 RABGAP1Q9Y3P9 1069 aa19.32■□□□□ 0.68
PLOD3-216ENST00000489927 SHMT1P34896 483 aa19.31■□□□□ 0.68
PLOD3-216ENST00000489927 PLCD1P51178 756 aa19.31■□□□□ 0.68
PLOD3-216ENST00000489927 USP14P54578 494 aa19.31■□□□□ 0.68
PLOD3-216ENST00000489927 LHX8Q68G74 356 aa19.31■□□□□ 0.68
PLOD3-216ENST00000489927 TMED8Q6PL24 325 aaPredicted RBP19.31■□□□□ 0.68
PLOD3-216ENST00000489927 ACER1Q8TDN7 264 aa19.31■□□□□ 0.68
PLOD3-216ENST00000489927 RIOK1Q9BRS2 568 aaKnown RBP19.31■□□□□ 0.68
PLOD3-216ENST00000489927 KIAA1683Q9H0B3 1180 aa19.31■□□□□ 0.68
PLOD3-216ENST00000489927 CWC22Q9HCG8 908 aaKnown RBP19.31■□□□□ 0.68
PLOD3-216ENST00000489927 COL6A3P12111 3177 aa19.31■□□□□ 0.68
PLOD3-216ENST00000489927 COL6A1P12109 1028 aa19.3■□□□□ 0.68
PLOD3-216ENST00000489927 VCAM1P19320 739 aa19.3■□□□□ 0.68
PLOD3-216ENST00000489927 MAP2K5Q13163 448 aa19.3■□□□□ 0.68
PLOD3-216ENST00000489927 CATSPERGQ6ZRH7 1159 aa19.3■□□□□ 0.68
PLOD3-216ENST00000489927 ERC1Q8IUD2 1116 aa19.3■□□□□ 0.68
PLOD3-216ENST00000489927 MAGEA10P43363 369 aaPredicted RBP19.29■□□□□ 0.68
PLOD3-216ENST00000489927 CCNA1P78396 465 aa19.29■□□□□ 0.68
PLOD3-216ENST00000489927 EDC3Q96F86 508 aaKnown RBP19.29■□□□□ 0.68
PLOD3-216ENST00000489927 CABP5Q9NP86 173 aa19.29■□□□□ 0.68
PLOD3-216ENST00000489927 MAGEB6P1A0A0J9YX57 407 aa19.28■□□□□ 0.68
PLOD3-216ENST00000489927 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
PLOD3-216ENST00000489927 POLR3DP05423 398 aaPredicted RBP19.28■□□□□ 0.68
PLOD3-216ENST00000489927 GUCY1A2P33402 732 aa19.28■□□□□ 0.68
PLOD3-216ENST00000489927 WDR78Q5VTH9 848 aa19.28■□□□□ 0.68
PLOD3-216ENST00000489927 PANK1Q8TE04 598 aa19.28■□□□□ 0.68
PLOD3-216ENST00000489927 IL1RAPL2Q9NP60 686 aa19.28■□□□□ 0.68
PLOD3-216ENST00000489927 FLRT1Q9NZU1 646 aa19.28■□□□□ 0.68
PLOD3-216ENST00000489927 BTBD7Q9P203 1132 aa19.28■□□□□ 0.68
PLOD3-216ENST00000489927 EVX2Q03828 476 aa19.27■□□□□ 0.68
PLOD3-216ENST00000489927 SLC9C2Q5TAH2 1124 aa19.27■□□□□ 0.68
PLOD3-216ENST00000489927 LBX2Q6XYB7 198 aa19.27■□□□□ 0.68
PLOD3-216ENST00000489927 RHPN1Q8TCX5 695 aa19.27■□□□□ 0.68
PLOD3-216ENST00000489927 RPAP3Q9H6T3 665 aaPredicted RBP19.27■□□□□ 0.68
PLOD3-216ENST00000489927 SLC15A5A6NIM6 579 aa19.26■□□□□ 0.67
PLOD3-216ENST00000489927 SPDYE16A6NNV3 312 aaPredicted RBP19.26■□□□□ 0.67
PLOD3-216ENST00000489927 PDE6AP16499 860 aa19.26■□□□□ 0.67
PLOD3-216ENST00000489927 PTPREP23469 700 aa19.26■□□□□ 0.67
PLOD3-216ENST00000489927 GABPAQ06546 454 aa19.26■□□□□ 0.67
PLOD3-216ENST00000489927 SEPT2Q15019 361 aa19.26■□□□□ 0.67
PLOD3-216ENST00000489927 TTF1Q15361 905 aaPredicted RBP19.26■□□□□ 0.67
PLOD3-216ENST00000489927 LRRC26Q2I0M4 334 aa19.26■□□□□ 0.67
PLOD3-216ENST00000489927 GRB14Q14449 540 aa19.25■□□□□ 0.67
PLOD3-216ENST00000489927 HSP90AB4PQ58FF6 505 aa19.25■□□□□ 0.67
PLOD3-216ENST00000489927 MFSD14CQ5VZR4 134 aa19.25■□□□□ 0.67
PLOD3-216ENST00000489927 TDHQ8IZJ6 230 aa19.25■□□□□ 0.67
PLOD3-216ENST00000489927 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
PLOD3-216ENST00000489927 MCM9Q9NXL9 1143 aa19.25■□□□□ 0.67
PLOD3-216ENST00000489927 IVNS1ABPQ9Y6Y0 642 aa19.25■□□□□ 0.67
PLOD3-216ENST00000489927 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
PLOD3-216ENST00000489927 NAV1Q8NEY1 1877 aa19.24■□□□□ 0.67
PLOD3-216ENST00000489927 DNAH12Q6ZR08 3092 aa19.24■□□□□ 0.67
PLOD3-216ENST00000489927 A0A1W2PRG0 241 aa19.24■□□□□ 0.67
PLOD3-216ENST00000489927 MPHOSPH10O00566 681 aaKnown RBP19.24■□□□□ 0.67
PLOD3-216ENST00000489927 HOXC6P09630 235 aa19.24■□□□□ 0.67
PLOD3-216ENST00000489927 SDR42E1Q8WUS8 393 aa19.24■□□□□ 0.67
PLOD3-216ENST00000489927 UBE2OQ9C0C9 1292 aaKnown RBP19.24■□□□□ 0.67
PLOD3-216ENST00000489927 TCRBV5S4A2TA0A5A2 114 aa19.23■□□□□ 0.67
PLOD3-216ENST00000489927 APBB1O00213 710 aa19.23■□□□□ 0.67
PLOD3-216ENST00000489927 GOLIM4O00461 696 aa19.23■□□□□ 0.67
PLOD3-216ENST00000489927 ATP2B2Q01814 1243 aa19.23■□□□□ 0.67
PLOD3-216ENST00000489927 LRIT3Q3SXY7 679 aa19.23■□□□□ 0.67
PLOD3-216ENST00000489927 GPR153Q6NV75 609 aa19.23■□□□□ 0.67
PLOD3-216ENST00000489927 LCORLQ8N3X6 602 aa19.23■□□□□ 0.67
PLOD3-216ENST00000489927 SLC17A8Q8NDX2 589 aa19.23■□□□□ 0.67
PLOD3-216ENST00000489927 NPLOC4Q8TAT6 608 aa19.23■□□□□ 0.67
PLOD3-216ENST00000489927 DNAJC2Q99543 621 aaKnown RBP19.23■□□□□ 0.67
PLOD3-216ENST00000489927 DCP1AQ9NPI6 582 aaPredicted RBP19.23■□□□□ 0.67
PLOD3-216ENST00000489927 DDX20Q9UHI6 824 aaKnown RBP19.23■□□□□ 0.67
PLOD3-216ENST00000489927 CYP2D6P10635 497 aa19.22■□□□□ 0.67
PLOD3-216ENST00000489927 CYP2C19P33261 490 aa19.22■□□□□ 0.67
PLOD3-216ENST00000489927 COG2Q14746 738 aa19.22■□□□□ 0.67
PLOD3-216ENST00000489927 CLASRPQ8N2M8 674 aaKnown RBP19.22■□□□□ 0.67
PLOD3-216ENST00000489927 SLC44A5Q8NCS7 719 aa19.22■□□□□ 0.67
PLOD3-216ENST00000489927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.22■□□□□ 0.67
PLOD3-216ENST00000489927 FRMPD3Q5JV73 1810 aa19.21■□□□□ 0.67
PLOD3-216ENST00000489927 CNGA1P29973 690 aa19.21■□□□□ 0.67
PLOD3-216ENST00000489927 Q7L0L9 218 aa19.21■□□□□ 0.67
PLOD3-216ENST00000489927 MIER1Q8N108 512 aa19.21■□□□□ 0.67
PLOD3-216ENST00000489927 DEFB123Q8N688 67 aa19.21■□□□□ 0.67
PLOD3-216ENST00000489927 KIF1BPQ96EK5 621 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms