RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 EPC1Q9H2F5 836 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 HIBADHP31937 336 aaKnown RBP17.95■□□□□ 0.46
BRD9-208ENST00000489816 KRT2P35908 639 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 PTGDRQ13258 359 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 UBE4AQ14139 1066 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 DCP1AQ9NPI6 582 aaPredicted RBP17.95■□□□□ 0.46
BRD9-208ENST00000489816 ZHX1Q9UKY1 873 aaPredicted RBP17.95■□□□□ 0.46
BRD9-208ENST00000489816 DOT1LQ8TEK3 1739 aa17.94■□□□□ 0.46
BRD9-208ENST00000489816 TEX33O43247 280 aa17.94■□□□□ 0.46
BRD9-208ENST00000489816 NLRP5P59047 1200 aa17.94■□□□□ 0.46
BRD9-208ENST00000489816 ANKIB1Q9P2G1 1089 aa17.94■□□□□ 0.46
BRD9-208ENST00000489816 SRPRBQ9Y5M8 271 aaKnown RBP17.94■□□□□ 0.46
BRD9-208ENST00000489816 NRDCO43847 1150 aa17.94■□□□□ 0.46
BRD9-208ENST00000489816 URI1O94763 535 aaPredicted RBP17.94■□□□□ 0.46
BRD9-208ENST00000489816 CD44P16070 742 aaKnown RBP17.94■□□□□ 0.46
BRD9-208ENST00000489816 MTF1Q14872 753 aa17.94■□□□□ 0.46
BRD9-208ENST00000489816 GRIK5Q16478 980 aa17.94■□□□□ 0.46
BRD9-208ENST00000489816 NGLY1Q96IV0 654 aa17.94■□□□□ 0.46
BRD9-208ENST00000489816 ACTN4O43707 911 aaKnown RBP17.93■□□□□ 0.46
BRD9-208ENST00000489816 XBP1P17861 261 aa17.93■□□□□ 0.46
BRD9-208ENST00000489816 VSTM4Q8IW00 320 aa17.93■□□□□ 0.46
BRD9-208ENST00000489816 SAP30BPQ9UHR5 308 aaKnown RBP17.93■□□□□ 0.46
BRD9-208ENST00000489816 RNF26Q9BY78 433 aaPredicted RBP17.93■□□□□ 0.46
BRD9-208ENST00000489816 IRX2Q9BZI1 471 aaPredicted RBP17.93■□□□□ 0.46
BRD9-208ENST00000489816 ZNF804BA4D1E1 1349 aa17.93■□□□□ 0.46
BRD9-208ENST00000489816 FANCGO15287 622 aa17.93■□□□□ 0.46
BRD9-208ENST00000489816 FUT2Q10981 343 aa17.93■□□□□ 0.46
BRD9-208ENST00000489816 KARSQ15046 597 aaKnown RBP17.93■□□□□ 0.46
BRD9-208ENST00000489816 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
BRD9-208ENST00000489816 CTCFLQ8NI51 663 aaPredicted RBP17.93■□□□□ 0.46
BRD9-208ENST00000489816 HOOK1Q9UJC3 728 aaKnown RBP17.93■□□□□ 0.46
BRD9-208ENST00000489816 USP17L3A6NCW0 530 aa17.92■□□□□ 0.46
BRD9-208ENST00000489816 USP17L4A6NCW7 530 aa17.92■□□□□ 0.46
BRD9-208ENST00000489816 ZPR1O75312 459 aa17.92■□□□□ 0.46
BRD9-208ENST00000489816 GOLGA8HP0CJ92 632 aa17.92■□□□□ 0.46
BRD9-208ENST00000489816 KMT5BQ4FZB7 885 aa17.92■□□□□ 0.46
BRD9-208ENST00000489816 USP17L1Q7RTZ2 530 aa17.92■□□□□ 0.46
BRD9-208ENST00000489816 DZIP1Q86YF9 867 aaKnown RBP17.92■□□□□ 0.46
BRD9-208ENST00000489816 A0A0U1RQJ8 604 aa17.92■□□□□ 0.46
BRD9-208ENST00000489816 ATRIPQ8WXE1 791 aa17.92■□□□□ 0.46
BRD9-208ENST00000489816 ANKRD36CQ5JPF3 1778 aa17.92■□□□□ 0.46
BRD9-208ENST00000489816 CCT6AP40227 531 aaKnown RBP17.91■□□□□ 0.46
BRD9-208ENST00000489816 TOGARAM2Q6ZUX3 1019 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 STX8Q9UNK0 236 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 SPATA31A5Q5VU36 1347 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 SPATA31A7Q8IWB4 1347 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 CBFA2T2O43439 604 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 TFAP4Q01664 338 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 NFIXQ14938 502 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 FBXO38Q6PIJ6 1188 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 PHF20Q9BVI0 1012 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 SLU7O95391 586 aaKnown RBP17.91■□□□□ 0.46
BRD9-208ENST00000489816 SF3B3Q15393 1217 aaKnown RBP17.91■□□□□ 0.46
BRD9-208ENST00000489816 TTC38Q5R3I4 469 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 ZSWIM4Q9H7M6 989 aa17.91■□□□□ 0.46
BRD9-208ENST00000489816 FAM237AA0A1B0GTK4 181 aa17.9■□□□□ 0.46
BRD9-208ENST00000489816 USP5P45974 858 aa17.9■□□□□ 0.46
BRD9-208ENST00000489816 PAGE5Q96GU1 130 aa17.9■□□□□ 0.46
BRD9-208ENST00000489816 PP2D1A8MPX8 630 aa17.9■□□□□ 0.46
BRD9-208ENST00000489816 MORC3Q14149 939 aa17.9■□□□□ 0.46
BRD9-208ENST00000489816 BAG1Q99933 345 aaPredicted RBP17.9■□□□□ 0.46
BRD9-208ENST00000489816 CRNKL1Q9BZJ0 848 aaKnown RBP17.9■□□□□ 0.46
BRD9-208ENST00000489816 CEP131Q9UPN4 1083 aa17.9■□□□□ 0.46
BRD9-208ENST00000489816 RTL9Q8NET4 1388 aa17.9■□□□□ 0.46
BRD9-208ENST00000489816 TMTC3Q6ZXV5 915 aa17.89■□□□□ 0.46
BRD9-208ENST00000489816 FBXO33Q7Z6M2 555 aa17.89■□□□□ 0.46
BRD9-208ENST00000489816 RASSF8Q8NHQ8 419 aa17.89■□□□□ 0.46
BRD9-208ENST00000489816 MYH13Q9UKX3 1938 aa17.89■□□□□ 0.45
BRD9-208ENST00000489816 NPY5RQ15761 445 aa17.89■□□□□ 0.45
BRD9-208ENST00000489816 CDCA7Q9BWT1 371 aaPredicted RBP17.89■□□□□ 0.45
BRD9-208ENST00000489816 CHD4Q14839 1912 aa17.89■□□□□ 0.45
BRD9-208ENST00000489816 PRPF3O43395 683 aaKnown RBP17.89■□□□□ 0.45
BRD9-208ENST00000489816 GNG11P61952 73 aa17.89■□□□□ 0.45
BRD9-208ENST00000489816 DPYDQ12882 1025 aa17.89■□□□□ 0.45
BRD9-208ENST00000489816 SMARCC1Q92922 1105 aaPredicted RBP17.89■□□□□ 0.45
BRD9-208ENST00000489816 VAT1LQ9HCJ6 419 aa17.89■□□□□ 0.45
BRD9-208ENST00000489816 ST7Q9NRC1 585 aa17.89■□□□□ 0.45
BRD9-208ENST00000489816 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
BRD9-208ENST00000489816 SARSP49591 514 aaKnown RBP17.88■□□□□ 0.45
BRD9-208ENST00000489816 ETF1P62495 437 aaKnown RBP17.88■□□□□ 0.45
BRD9-208ENST00000489816 MLKLQ8NB16 471 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 TGFBRAP1Q8WUH2 860 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 WDR24Q96S15 920 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 MKNK2Q9HBH9 465 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 BRMS1Q9HCU9 246 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 LZTFL1Q9NQ48 299 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 ANAPC4Q9UJX5 808 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 CLEC4GQ6UXB4 293 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 MAPKAPK5Q8IW41 473 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 SH3RF3Q8TEJ3 882 aaPredicted RBP17.88■□□□□ 0.45
BRD9-208ENST00000489816 BRIP1Q9BX63 1249 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 PPP2R2CQ9Y2T4 447 aa17.88■□□□□ 0.45
BRD9-208ENST00000489816 SOWAHDA6NJG2 315 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 IL17AQ16552 155 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 SPECC1LQ69YQ0 1117 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 TC2NQ8N9U0 490 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 CARD6Q9BX69 1037 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 CTNND2Q9UQB3 1225 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 NHSL1Q5SYE7 1610 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms