RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 PHF20Q9BVI0 1012 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 PYCARDQ9ULZ3 195 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 BAG3O95817 575 aa17.16■□□□□ 0.34
COL9A1-208ENST00000489611 LDHCP07864 332 aa17.16■□□□□ 0.34
COL9A1-208ENST00000489611 KIF5BP33176 963 aa17.16■□□□□ 0.34
COL9A1-208ENST00000489611 GTF2F1P35269 517 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL9A1-208ENST00000489611 KRT2P35908 639 aa17.16■□□□□ 0.34
COL9A1-208ENST00000489611 FUT2Q10981 343 aa17.16■□□□□ 0.34
COL9A1-208ENST00000489611 LRRC8AQ8IWT6 810 aa17.16■□□□□ 0.34
COL9A1-208ENST00000489611 FAM177A1Q8N128 213 aaPredicted RBP17.16■□□□□ 0.34
COL9A1-208ENST00000489611 DACH1Q9UI36 760 aa17.16■□□□□ 0.34
COL9A1-208ENST00000489611 PARP3Q9Y6F1 533 aa17.16■□□□□ 0.34
COL9A1-208ENST00000489611 NRDCO43847 1150 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 TOB1P50616 345 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-208ENST00000489611 CT47A1Q5JQC4 288 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-208ENST00000489611 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 TMTC3Q6ZXV5 915 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 TRIML1Q8N9V2 468 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 OSBPL5Q9H0X9 879 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-208ENST00000489611 AATFQ9NY61 560 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL9A1-208ENST00000489611 ANKIB1Q9P2G1 1089 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 FBXO2Q9UK22 296 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-208ENST00000489611 LDHBP07195 334 aaKnown RBP17.15■□□□□ 0.34
COL9A1-208ENST00000489611 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 FERMT2Q96AC1 680 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 ZNF287Q9HBT7 754 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 KCNJ14Q9UNX9 436 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 ROBO3Q96MS0 1386 aa17.15■□□□□ 0.34
COL9A1-208ENST00000489611 TRIM75PA6NK02 468 aa17.14■□□□□ 0.33
COL9A1-208ENST00000489611 CBFA2T2O43439 604 aa17.14■□□□□ 0.33
COL9A1-208ENST00000489611 PRDX5P30044 214 aa17.14■□□□□ 0.33
COL9A1-208ENST00000489611 TRAPPC10P48553 1259 aa17.14■□□□□ 0.33
COL9A1-208ENST00000489611 MYL5Q02045 173 aa17.14■□□□□ 0.33
COL9A1-208ENST00000489611 STK11IPQ8N1F8 1099 aa17.14■□□□□ 0.33
COL9A1-208ENST00000489611 KCND1Q9NSA2 647 aa17.14■□□□□ 0.33
COL9A1-208ENST00000489611 KLRK1P26718 216 aa17.13■□□□□ 0.33
COL9A1-208ENST00000489611 PPP4CP60510 307 aa17.13■□□□□ 0.33
COL9A1-208ENST00000489611 PKN1Q16512 942 aa17.13■□□□□ 0.33
COL9A1-208ENST00000489611 NT5DC1Q5TFE4 455 aa17.13■□□□□ 0.33
COL9A1-208ENST00000489611 CCDC150Q8NCX0 1101 aa17.13■□□□□ 0.33
COL9A1-208ENST00000489611 ANKS1AQ92625 1134 aa17.13■□□□□ 0.33
COL9A1-208ENST00000489611 PYM1Q9BRP8 204 aaKnown RBP17.13■□□□□ 0.33
COL9A1-208ENST00000489611 NRBP1Q9UHY1 535 aa17.13■□□□□ 0.33
COL9A1-208ENST00000489611 KLRG2A4D1S0 409 aaPredicted RBP17.13■□□□□ 0.33
COL9A1-208ENST00000489611 GNAQP50148 359 aa17.13■□□□□ 0.33
COL9A1-208ENST00000489611 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
COL9A1-208ENST00000489611 CACTINQ8WUQ7 758 aaKnown RBP17.13■□□□□ 0.33
COL9A1-208ENST00000489611 RBM17Q96I25 401 aaKnown RBP17.13■□□□□ 0.33
COL9A1-208ENST00000489611 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
COL9A1-208ENST00000489611 KCNJ6P48051 423 aa17.12■□□□□ 0.33
COL9A1-208ENST00000489611 LONRF3Q496Y0 759 aa17.12■□□□□ 0.33
COL9A1-208ENST00000489611 MLKLQ8NB16 471 aa17.12■□□□□ 0.33
COL9A1-208ENST00000489611 CLIC6Q96NY7 704 aa17.12■□□□□ 0.33
COL9A1-208ENST00000489611 SH3GLB2Q9NR46 395 aa17.12■□□□□ 0.33
COL9A1-208ENST00000489611 TCP11L1Q9NUJ3 509 aa17.12■□□□□ 0.33
COL9A1-208ENST00000489611 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
COL9A1-208ENST00000489611 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 CALML3P27482 149 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 MDM2Q00987 491 aaPredicted RBP17.11■□□□□ 0.33
COL9A1-208ENST00000489611 NR5A1Q13285 461 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 NCAPHQ15003 741 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 C12orf60Q5U649 245 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 TMC4Q7Z404 712 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
COL9A1-208ENST00000489611 CCDC125Q86Z20 511 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 ERCC4Q92889 916 aaPredicted RBP17.11■□□□□ 0.33
COL9A1-208ENST00000489611 CABP5Q9NP86 173 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 MKRN1Q9UHC7 482 aaKnown RBP17.11■□□□□ 0.33
COL9A1-208ENST00000489611 CYP2D7A0A087X1C5 515 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 PLCG2P16885 1265 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
COL9A1-208ENST00000489611 POSTNQ15063 836 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 CCDC144BQ3MJ40 725 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 MCM9Q9NXL9 1143 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 PAXBP1Q9Y5B6 917 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 PCDHB6Q9Y5E3 794 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 CNTNAP5Q8WYK1 1306 aa17.11■□□□□ 0.33
COL9A1-208ENST00000489611 BIN1O00499 593 aa17.1■□□□□ 0.33
COL9A1-208ENST00000489611 PRDM1O75626 825 aa17.1■□□□□ 0.33
COL9A1-208ENST00000489611 USP5P45974 858 aa17.1■□□□□ 0.33
COL9A1-208ENST00000489611 KAT14Q9H8E8 782 aa17.1■□□□□ 0.33
COL9A1-208ENST00000489611 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
COL9A1-208ENST00000489611 KIF2AO00139 706 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-208ENST00000489611 BBOX1O75936 387 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 SMC2O95347 1197 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 TUBB4AP04350 444 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 SCG2P13521 617 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 LRMPQ12912 555 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 PNOCQ13519 176 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-208ENST00000489611 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-208ENST00000489611 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
COL9A1-208ENST00000489611 VPS54Q9P1Q0 977 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 PCDHA5Q9Y5H7 936 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 NAV1Q8NEY1 1877 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 PLEKHA8P1O95397 391 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 SRGNP10124 158 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 SKILP12757 684 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms