RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SERPINB13Q9UIV8 391 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 USP17L15C9J2P7 530 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 USP17L13C9JLJ4 530 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 USP17L11C9JVI0 530 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 USP17L18D6R9N7 530 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 USP17L22D6RA61 530 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 USP17L17D6RBQ6 530 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 USP17L19D6RCP7 530 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 USP17L20D6RJB6 530 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 GLRX3O76003 335 aaKnown RBP11.39□□□□□ -0.59
SNX17-207ENST00000489402 CCNA1P78396 465 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNX17-207ENST00000489402 USP17L24Q0WX57 530 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 RAB3GAP1Q15042 981 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 ZYXQ15942 572 aaKnown RBP11.39□□□□□ -0.59
SNX17-207ENST00000489402 Q3C1V9 767 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 MAP3K21Q5TCX8 1036 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 TATDN1Q6P1N9 297 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 PLEKHH3Q7Z736 793 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 AACSQ86V21 672 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 C12orf42Q96LP6 360 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 APBA2Q99767 749 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 PORCNQ9H237 461 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 CABP5Q9NP86 173 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 OGDHLQ9ULD0 1010 aa11.39□□□□□ -0.59
SNX17-207ENST00000489402 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
SNX17-207ENST00000489402 TTF1Q15361 905 aaPredicted RBP11.38□□□□□ -0.59
SNX17-207ENST00000489402 ABCB5Q2M3G0 1257 aa11.38□□□□□ -0.59
SNX17-207ENST00000489402 SLFNL1Q499Z3 407 aa11.38□□□□□ -0.59
SNX17-207ENST00000489402 CERKLQ49MI3 558 aaPredicted RBP11.38□□□□□ -0.59
SNX17-207ENST00000489402 HSP90AB4PQ58FF6 505 aa11.38□□□□□ -0.59
SNX17-207ENST00000489402 WDR78Q5VTH9 848 aa11.38□□□□□ -0.59
SNX17-207ENST00000489402 PANK1Q8TE04 598 aa11.38□□□□□ -0.59
SNX17-207ENST00000489402 ZMYND8Q9ULU4 1186 aaPredicted RBP11.38□□□□□ -0.59
SNX17-207ENST00000489402 RABGAP1Q9Y3P9 1069 aa11.38□□□□□ -0.59
SNX17-207ENST00000489402 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 SOX1O00570 391 aaPredicted RBP11.37□□□□□ -0.59
SNX17-207ENST00000489402 CHGBP05060 677 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 POLR3DP05423 398 aaPredicted RBP11.37□□□□□ -0.59
SNX17-207ENST00000489402 BMP8BP34820 402 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 CACNB2Q08289 660 aaPredicted RBP11.37□□□□□ -0.59
SNX17-207ENST00000489402 MAP2K5Q13163 448 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 MORN1Q5T089 497 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 CEP85Q6P2H3 762 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 USP6NLQ92738 828 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 GDF15Q99988 308 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 KIAA1683Q9H0B3 1180 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 IVNS1ABPQ9Y6Y0 642 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 A0A0C4DFX4 3053 aa11.37□□□□□ -0.59
SNX17-207ENST00000489402 MAGEB6P1A0A0J9YX57 407 aa11.36□□□□□ -0.59
SNX17-207ENST00000489402 CNMDO75829 334 aa11.36□□□□□ -0.59
SNX17-207ENST00000489402 SYN1P17600 705 aa11.36□□□□□ -0.59
SNX17-207ENST00000489402 VCAM1P19320 739 aa11.36□□□□□ -0.59
SNX17-207ENST00000489402 CCND3P30281 292 aaPredicted RBP11.36□□□□□ -0.59
SNX17-207ENST00000489402 CCL14Q16627 93 aa11.36□□□□□ -0.59
SNX17-207ENST00000489402 MFSD14CQ5VZR4 134 aa11.36□□□□□ -0.59
SNX17-207ENST00000489402 CATSPERGQ6ZRH7 1159 aa11.36□□□□□ -0.59
SNX17-207ENST00000489402 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
SNX17-207ENST00000489402 CRNKL1Q9BZJ0 848 aaKnown RBP11.36□□□□□ -0.59
SNX17-207ENST00000489402 FRMPD3Q5JV73 1810 aa11.36□□□□□ -0.59
SNX17-207ENST00000489402 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 MS4A1P11836 297 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 SHMT1P34896 483 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 PLCD1P51178 756 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 LBX2Q6XYB7 198 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 ACER1Q8TDN7 264 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 LRCH3Q96II8 777 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 RIOK1Q9BRS2 568 aaKnown RBP11.35□□□□□ -0.59
SNX17-207ENST00000489402 RPAP3Q9H6T3 665 aaPredicted RBP11.35□□□□□ -0.59
SNX17-207ENST00000489402 IL1RAPL2Q9NP60 686 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 MCM9Q9NXL9 1143 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 MYH8P13535 1937 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 PFASO15067 1338 aa11.35□□□□□ -0.59
SNX17-207ENST00000489402 SPDYE16A6NNV3 312 aaPredicted RBP11.34□□□□□ -0.59
SNX17-207ENST00000489402 MPHOSPH10O00566 681 aaKnown RBP11.34□□□□□ -0.59
SNX17-207ENST00000489402 MSCO60682 206 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 HMMRO75330 724 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 PDE6AP16499 860 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 PTPREP23469 700 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 GUCY1A2P33402 732 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 MAGEA10P43363 369 aaPredicted RBP11.34□□□□□ -0.59
SNX17-207ENST00000489402 ATP2B2Q01814 1243 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 SIRT2Q8IXJ6 389 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 TDHQ8IZJ6 230 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 CLASRPQ8N2M8 674 aaKnown RBP11.34□□□□□ -0.59
SNX17-207ENST00000489402 RHPN1Q8TCX5 695 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 UBE2OQ9C0C9 1292 aaKnown RBP11.34□□□□□ -0.59
SNX17-207ENST00000489402 BCL11AQ9H165 835 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 EYSQ5T1H1 3165 aa11.34□□□□□ -0.59
SNX17-207ENST00000489402 GOLIM4O00461 696 aa11.33□□□□□ -0.6
SNX17-207ENST00000489402 IFIT2P09913 472 aaKnown RBP11.33□□□□□ -0.6
SNX17-207ENST00000489402 CYP2D6P10635 497 aa11.33□□□□□ -0.6
SNX17-207ENST00000489402 COL6A1P12109 1028 aa11.33□□□□□ -0.6
SNX17-207ENST00000489402 CNGA1P29973 690 aa11.33□□□□□ -0.6
SNX17-207ENST00000489402 SEPT2Q15019 361 aa11.33□□□□□ -0.6
SNX17-207ENST00000489402 KIAA1755Q5JYT7 1200 aa11.33□□□□□ -0.6
SNX17-207ENST00000489402 LHX8Q68G74 356 aa11.33□□□□□ -0.6
SNX17-207ENST00000489402 GPR153Q6NV75 609 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms