RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 SSRP1Q08945 709 aaKnown RBP21.01■□□□□ 0.95
CD40-206ENST00000489304 FBXO18Q8NFZ0 1043 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 NEDD1Q8NHV4 660 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 NUP133Q8WUM0 1156 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 PHKBQ93100 1093 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 C8orf76Q96K31 380 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 CNOT7Q9UIV1 285 aaKnown RBP21.01■□□□□ 0.95
CD40-206ENST00000489304 ENTPD3O75355 529 aa21■□□□□ 0.95
CD40-206ENST00000489304 HLA-DOAP06340 250 aa21■□□□□ 0.95
CD40-206ENST00000489304 SAMD7Q7Z3H4 446 aa21■□□□□ 0.95
CD40-206ENST00000489304 USP48Q86UV5 1035 aa21■□□□□ 0.95
CD40-206ENST00000489304 ZSCAN29Q8IWY8 852 aaPredicted RBP21■□□□□ 0.95
CD40-206ENST00000489304 DNAJC18Q9H819 358 aa21■□□□□ 0.95
CD40-206ENST00000489304 VEZTQ9HBM0 779 aa21■□□□□ 0.95
CD40-206ENST00000489304 RBM28Q9NW13 759 aaKnown RBP21■□□□□ 0.95
CD40-206ENST00000489304 RNF181Q9P0P0 153 aa21■□□□□ 0.95
CD40-206ENST00000489304 SCAF8Q9UPN6 1271 aaKnown RBP21■□□□□ 0.95
CD40-206ENST00000489304 DDX49Q9Y6V7 483 aaKnown RBP21■□□□□ 0.95
CD40-206ENST00000489304 CNTNAP1P78357 1384 aa20.99■□□□□ 0.95
CD40-206ENST00000489304 SHMT1P34896 483 aa20.99■□□□□ 0.95
CD40-206ENST00000489304 FOSBP53539 338 aa20.99■□□□□ 0.95
CD40-206ENST00000489304 NBPF11Q86T75 865 aa20.99■□□□□ 0.95
CD40-206ENST00000489304 CRACR2BQ8N4Y2 399 aaPredicted RBP20.99■□□□□ 0.95
CD40-206ENST00000489304 DPF2Q92785 391 aa20.99■□□□□ 0.95
CD40-206ENST00000489304 TMOD2Q9NZR1 351 aa20.99■□□□□ 0.95
CD40-206ENST00000489304 SWAP70Q9UH65 585 aa20.99■□□□□ 0.95
CD40-206ENST00000489304 SERPINB13Q9UIV8 391 aa20.99■□□□□ 0.95
CD40-206ENST00000489304 CSPP1Q1MSJ5 1256 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 TBC1D10BQ4KMP7 808 aaPredicted RBP20.98■□□□□ 0.95
CD40-206ENST00000489304 MAP3K14Q99558 947 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 ALG1Q9BT22 464 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 EHD4Q9H223 541 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 GDPD2Q9HCC8 539 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 TAOK2Q9UL54 1235 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 ASTN2O75129 1339 aaPredicted RBP20.98■□□□□ 0.95
CD40-206ENST00000489304 PLIN4Q96Q06 1357 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 AKR1B1P15121 316 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 KRT85P78386 507 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 GUCY1B3Q02153 619 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 GSE1Q14687 1217 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 TRIM22Q8IYM9 498 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 WASF1Q92558 559 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.98■□□□□ 0.95
CD40-206ENST00000489304 SLC26A6Q9BXS9 759 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 DHX36Q9H2U1 1008 aaKnown RBP20.98■□□□□ 0.95
CD40-206ENST00000489304 KAT14Q9H8E8 782 aa20.98■□□□□ 0.95
CD40-206ENST00000489304 SBF1O95248 1867 aa20.97■□□□□ 0.95
CD40-206ENST00000489304 NCLP19338 710 aaKnown RBP20.97■□□□□ 0.95
CD40-206ENST00000489304 C9orf131Q5VYM1 1079 aa20.97■□□□□ 0.95
CD40-206ENST00000489304 FAM173BQ6P4H8 233 aa20.97■□□□□ 0.95
CD40-206ENST00000489304 CDAN1Q8IWY9 1227 aa20.97■□□□□ 0.95
CD40-206ENST00000489304 COL2A1P02458 1487 aaPredicted RBP20.97■□□□□ 0.95
CD40-206ENST00000489304 GREB1LQ9C091 1923 aaPredicted RBP20.97■□□□□ 0.95
CD40-206ENST00000489304 MBD3O95983 291 aa20.96■□□□□ 0.95
CD40-206ENST00000489304 NOVP48745 357 aa20.96■□□□□ 0.95
CD40-206ENST00000489304 FUT2Q10981 343 aa20.96■□□□□ 0.95
CD40-206ENST00000489304 SHROOM1Q2M3G4 852 aaPredicted RBP20.96■□□□□ 0.95
CD40-206ENST00000489304 GPT2Q8TD30 523 aa20.96■□□□□ 0.95
CD40-206ENST00000489304 FAM151AQ8WW52 585 aa20.96■□□□□ 0.95
CD40-206ENST00000489304 AIFM3Q96NN9 605 aa20.96■□□□□ 0.95
CD40-206ENST00000489304 RNF26Q9BY78 433 aaPredicted RBP20.96■□□□□ 0.95
CD40-206ENST00000489304 PI4KBQ9UBF8 816 aa20.96■□□□□ 0.95
CD40-206ENST00000489304 DEXIO95424 95 aa20.95■□□□□ 0.94
CD40-206ENST00000489304 OTUD7BQ6GQQ9 843 aa20.95■□□□□ 0.94
CD40-206ENST00000489304 TMTC3Q6ZXV5 915 aa20.95■□□□□ 0.94
CD40-206ENST00000489304 PNMA1Q8ND90 353 aa20.95■□□□□ 0.94
CD40-206ENST00000489304 CTCFLQ8NI51 663 aaPredicted RBP20.95■□□□□ 0.94
CD40-206ENST00000489304 TMEM39BQ9GZU3 492 aa20.95■□□□□ 0.94
CD40-206ENST00000489304 DICER1Q9UPY3 1922 aaKnown RBP20.95■□□□□ 0.94
CD40-206ENST00000489304 ATRNL1Q5VV63 1379 aa20.95■□□□□ 0.94
CD40-206ENST00000489304 FIBPO43427 364 aa20.95■□□□□ 0.94
CD40-206ENST00000489304 DDNO94850 711 aaPredicted RBP20.95■□□□□ 0.94
CD40-206ENST00000489304 GPR162Q16538 588 aa20.95■□□□□ 0.94
CD40-206ENST00000489304 SCAND2PQ9GZW5 306 aaPredicted RBP20.95■□□□□ 0.94
CD40-206ENST00000489304 KIF4BQ2VIQ3 1234 aa20.94■□□□□ 0.94
CD40-206ENST00000489304 KRT40Q6A162 431 aa20.94■□□□□ 0.94
CD40-206ENST00000489304 ATL3Q6DD88 541 aa20.94■□□□□ 0.94
CD40-206ENST00000489304 CLEC10AQ8IUN9 316 aa20.94■□□□□ 0.94
CD40-206ENST00000489304 GPC2Q8N158 579 aa20.94■□□□□ 0.94
CD40-206ENST00000489304 TRPM4Q8TD43 1214 aa20.94■□□□□ 0.94
CD40-206ENST00000489304 TMEM47Q9BQJ4 181 aa20.94■□□□□ 0.94
CD40-206ENST00000489304 GJB4Q9NTQ9 266 aa20.94■□□□□ 0.94
CD40-206ENST00000489304 ELP1O95163 1332 aa20.94■□□□□ 0.94
CD40-206ENST00000489304 PRPF3O43395 683 aaKnown RBP20.93■□□□□ 0.94
CD40-206ENST00000489304 MYO1BO43795 1136 aa20.93■□□□□ 0.94
CD40-206ENST00000489304 GADD45BO75293 160 aaPredicted RBP20.93■□□□□ 0.94
CD40-206ENST00000489304 KIF5BP33176 963 aa20.93■□□□□ 0.94
CD40-206ENST00000489304 EPS15P42566 896 aa20.93■□□□□ 0.94
CD40-206ENST00000489304 FOXP4Q8IVH2 680 aaPredicted RBP20.93■□□□□ 0.94
CD40-206ENST00000489304 CMTR1Q8N1G2 835 aaKnown RBP20.93■□□□□ 0.94
CD40-206ENST00000489304 CEP95Q96GE4 821 aa20.93■□□□□ 0.94
CD40-206ENST00000489304 CSRNP1Q96S65 589 aa20.93■□□□□ 0.94
CD40-206ENST00000489304 GPRC5DQ9NZD1 345 aa20.93■□□□□ 0.94
CD40-206ENST00000489304 PGAP2Q9UHJ9 254 aa20.93■□□□□ 0.94
CD40-206ENST00000489304 IGKV6D-41A0A0C4DH26 115 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 PLEKHA8P1O95397 391 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 GUCY1A2P33402 732 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 MMP14P50281 582 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 UBE2HP62256 183 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 KIF23Q02241 960 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms