RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PEX26Q7Z412 305 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 CCDC105Q8IYK2 499 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 MGARPQ8TDB4 240 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 EYA3Q99504 573 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 PPP1R12CQ9BZL4 782 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 BTG4Q9NY30 223 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 KAT6BQ8WYB5 2073 aa19.55■□□□□ 0.72
NPHP4-209ENST00000489180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.55■□□□□ 0.72
NPHP4-209ENST00000489180 RUFY4Q6ZNE9 571 aa19.55■□□□□ 0.72
NPHP4-209ENST00000489180 PPANQ9NQ55 473 aaKnown RBP19.55■□□□□ 0.72
NPHP4-209ENST00000489180 BIN2Q9UBW5 565 aaPredicted RBP19.55■□□□□ 0.72
NPHP4-209ENST00000489180 ARHGAP44Q17R89 818 aa19.55■□□□□ 0.72
NPHP4-209ENST00000489180 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
NPHP4-209ENST00000489180 MRPL44Q9H9J2 332 aaKnown RBP19.55■□□□□ 0.72
NPHP4-209ENST00000489180 GIGYF1O75420 1035 aaPredicted RBP19.55■□□□□ 0.72
NPHP4-209ENST00000489180 FNBP4Q8N3X1 1017 aaPredicted RBP19.55■□□□□ 0.72
NPHP4-209ENST00000489180 CNBD1Q8NA66 436 aa19.55■□□□□ 0.72
NPHP4-209ENST00000489180 ARHGEF2Q92974 986 aaKnown RBP19.55■□□□□ 0.72
NPHP4-209ENST00000489180 ATP5JP18859 108 aa19.55■□□□□ 0.72
NPHP4-209ENST00000489180 VSIG1Q86XK7 387 aa19.55■□□□□ 0.72
NPHP4-209ENST00000489180 ODF2LQ9ULJ1 636 aa19.55■□□□□ 0.72
NPHP4-209ENST00000489180 KCNJ18B7U540 433 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 CLNS1AP54105 237 aaKnown RBP19.54■□□□□ 0.72
NPHP4-209ENST00000489180 KCNJ12Q14500 433 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 DNM3Q9UQ16 869 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 SAR1BQ9Y6B6 198 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 EXOC3O60645 756 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 NOL3O60936 208 aaKnown RBP19.54■□□□□ 0.72
NPHP4-209ENST00000489180 EIF4A1P60842 406 aaKnown RBP19.54■□□□□ 0.72
NPHP4-209ENST00000489180 GEN1Q17RS7 908 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 DDX41Q9UJV9 622 aaKnown RBP19.54■□□□□ 0.72
NPHP4-209ENST00000489180 ABCC4O15439 1325 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 HINFPQ9BQA5 517 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 LSM14BQ9BX40 385 aaKnown RBP19.54■□□□□ 0.72
NPHP4-209ENST00000489180 ZNF215Q9UL58 517 aaPredicted RBP19.54■□□□□ 0.72
NPHP4-209ENST00000489180 TGFBRAP1Q8WUH2 860 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 PPP2R2CQ9Y2T4 447 aa19.54■□□□□ 0.72
NPHP4-209ENST00000489180 TFAP4Q01664 338 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 TRPC3Q13507 836 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 TRAPPC3LQ5T215 181 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 NBPF14Q5TI25 921 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 RDH13Q8NBN7 331 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 CFAP43Q8NDM7 1665 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 B4DLN1 442 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 PPP2R5DQ14738 602 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 HHATQ5VTY9 493 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 TAOK1Q7L7X3 1001 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 CFAP57Q96MR6 1250 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 CLIC6Q96NY7 704 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 PPFIA1Q13136 1202 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 LRRC8AQ8IWT6 810 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 C19orf44Q9H6X5 657 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 KCNQ3O43525 872 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 PPARAQ07869 468 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 PARP10Q53GL7 1025 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 NEURL1BA8MQ27 555 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 FLOT1O75955 427 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 STRN3Q13033 797 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 MORC3Q14149 939 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 KRT71Q3SY84 523 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 CLEC11AQ9Y240 323 aa19.53■□□□□ 0.72
NPHP4-209ENST00000489180 IBTKQ9P2D0 1353 aaPredicted RBP19.52■□□□□ 0.72
NPHP4-209ENST00000489180 CTTNBP2Q8WZ74 1663 aa19.52■□□□□ 0.72
NPHP4-209ENST00000489180 BUB1O43683 1085 aa19.52■□□□□ 0.72
NPHP4-209ENST00000489180 PYCARDQ9ULZ3 195 aa19.52■□□□□ 0.72
NPHP4-209ENST00000489180 A0A1B0GUA9 196 aa19.52■□□□□ 0.72
NPHP4-209ENST00000489180 ZNF500O60304 480 aaPredicted RBP19.52■□□□□ 0.72
NPHP4-209ENST00000489180 GBP1P32455 592 aa19.52■□□□□ 0.72
NPHP4-209ENST00000489180 SLC1A4P43007 532 aa19.52■□□□□ 0.72
NPHP4-209ENST00000489180 LONRF2Q1L5Z9 754 aa19.52■□□□□ 0.72
NPHP4-209ENST00000489180 MCUR1Q96AQ8 359 aa19.52■□□□□ 0.72
NPHP4-209ENST00000489180 USP44Q9H0E7 712 aa19.52■□□□□ 0.72
NPHP4-209ENST00000489180 ANKRD42Q8N9B4 389 aa19.52■□□□□ 0.71
NPHP4-209ENST00000489180 ZNF496Q96IT1 587 aaPredicted RBP19.52■□□□□ 0.71
NPHP4-209ENST00000489180 TCP10Q12799 353 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 ZNF654Q8IZM8 581 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 FANCLQ9NW38 375 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 COBLO75128 1261 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 ADD1P35611 737 aaKnown RBP19.51■□□□□ 0.71
NPHP4-209ENST00000489180 SNX16P57768 344 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 ZSCAN26Q16670 478 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 VPS52Q8N1B4 723 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 CCDC110Q8TBZ0 833 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 U2AF1L4Q8WU68 220 aaKnown RBP19.51■□□□□ 0.71
NPHP4-209ENST00000489180 EAF2Q96CJ1 260 aaPredicted RBP19.51■□□□□ 0.71
NPHP4-209ENST00000489180 GGA1Q9UJY5 639 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 EXOC7Q9UPT5 735 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 NDUFA8P51970 172 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 ITIH3Q06033 890 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 CACNA2D3Q8IZS8 1091 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 PCDHA7Q9UN72 937 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 CLIC4Q9Y696 253 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 KRT15P19012 456 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 SEPT14Q6ZU15 432 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 NOSTRINQ8IVI9 506 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 SYCE1Q8N0S2 351 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 ZSWIM6Q9HCJ5 1215 aa19.51■□□□□ 0.71
NPHP4-209ENST00000489180 ARHGAP25P42331 645 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 GNGT1P63211 74 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms