RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 IFNAR1P17181 557 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 XBP1P17861 261 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 ATP2B4P23634 1241 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 GYG1P46976 350 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 COL9A3Q14050 684 aaPredicted RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 WTAPQ15007 396 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 SAFBQ15424 915 aaKnown RBP eCLIP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 SF3A1Q15459 793 aaKnown RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 LCE2CQ5TA81 110 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 SASS6Q6UVJ0 657 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 RBM43Q6ZSC3 357 aaKnown RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 CHST3Q7LGC8 479 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 IQCA1Q86XH1 822 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 LCORLQ8N3X6 602 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 RPGRQ92834 1020 aaKnown RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 RBM17Q96I25 401 aaKnown RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 CHAMP1Q96JM3 812 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 NOL10Q9BSC4 688 aaKnown RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 CLSTN2Q9H4D0 955 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 LY9Q9HBG7 655 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 NCOA5Q9HCD5 579 aaKnown RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 EPB41L4AQ9HCS5 686 aaPredicted RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 POLR3EQ9NVU0 708 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 RTEL1Q9NZ71 1219 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 ZSWIM5Q9P217 1185 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 ARPP21Q9UBL0 812 aaPredicted RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 SRP68Q9UHB9 627 aaKnown RBP7.69□□□□□ -1.18
HDLBP-243ENST00000488923 C4BP0C0L5 1744 aa7.69□□□□□ -1.18
HDLBP-243ENST00000488923 A0A0G2JLW4 131 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 RCCD1A6NED2 376 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 TERTO14746 1132 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 ORC4O43929 436 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 KINO60870 393 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 KDM4AO75164 1064 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 BAG3O95817 575 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 FGRP09769 529 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 FDPSP14324 419 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 MSNP26038 577 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 HSPA1LP34931 641 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 CLCN1P35523 988 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 AKAP17AQ02040 695 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 SSRP1Q08945 709 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 GNL2Q13823 731 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 NFIXQ14938 502 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 SBK1Q52WX2 424 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 ADALQ6DHV7 355 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 CYB5R4Q7L1T6 521 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 KRT27Q7Z3Y8 459 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 ZSCAN30Q86W11 494 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 FLAD1Q8NFF5 587 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 RIOK1Q9BRS2 568 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 ALG1Q9BT22 464 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 ZNF287Q9HBT7 754 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 TOMM22Q9NS69 142 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 RBM28Q9NW13 759 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 DACT1Q9NYF0 836 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 TFIP11Q9UBB9 837 aaKnown RBP7.68□□□□□ -1.18
HDLBP-243ENST00000488923 NEDD4P46934 1319 aa7.68□□□□□ -1.18
HDLBP-243ENST00000488923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.67□□□□□ -1.18
HDLBP-243ENST00000488923 GOLGA6L6A8MZA4 724 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 SNAP23O00161 211 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 PPP6R2O75170 966 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 DDAH1O94760 285 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 DEXIO95424 95 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 FMNL1O95466 1100 aaPredicted RBP7.67□□□□□ -1.18
HDLBP-243ENST00000488923 TM4SF1P30408 202 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 ADD1P35611 737 aaKnown RBP7.67□□□□□ -1.18
HDLBP-243ENST00000488923 ME1P48163 572 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 FAM160A1Q05DH4 1040 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 PDE4BQ07343 736 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 PTGDRQ13258 359 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 STK38Q15208 465 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 RTN1Q16799 776 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 CRY2Q49AN0 593 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 MYSM1Q5VVJ2 828 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 CATIPQ7Z7H3 387 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 DZIP1Q86YF9 867 aaKnown RBP7.67□□□□□ -1.18
HDLBP-243ENST00000488923 MIGA1Q8NAN2 632 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 RBM46Q8TBY0 533 aaKnown RBP7.67□□□□□ -1.18
HDLBP-243ENST00000488923 FAM200AQ8TCP9 573 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 TBC1D22AQ8WUA7 517 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 MRPS27Q92552 414 aaKnown RBP7.67□□□□□ -1.18
HDLBP-243ENST00000488923 NSUN4Q96CB9 384 aaKnown RBP7.67□□□□□ -1.18
HDLBP-243ENST00000488923 CRAMP1Q96RY5 1269 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 FUCA2Q9BTY2 467 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 RNF26Q9BY78 433 aaPredicted RBP7.67□□□□□ -1.18
HDLBP-243ENST00000488923 QTRT2Q9H974 415 aaKnown RBP7.67□□□□□ -1.18
HDLBP-243ENST00000488923 SENP2Q9HC62 589 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 ANKIB1Q9P2G1 1089 aa7.67□□□□□ -1.18
HDLBP-243ENST00000488923 MINDY4BA8MYZ0 360 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 PRKAB2O43741 272 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 BMP15O95972 392 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 SERPINB2P05120 415 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 LDHBP07195 334 aaKnown RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 GYS1P13807 737 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 LIG1P18858 919 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 U2AF2P26368 475 aaKnown RBP eCLIP7.66□□□□□ -1.181e-6■■■□□ 15
HDLBP-243ENST00000488923 HOXA10P31260 410 aaPredicted RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 MLLT3P42568 568 aaPredicted RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 KCNQ4P56696 695 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms