RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PDE4CQ08493 712 aa5.73□□□□□ -1.49
CCDC93-209ENST00000488908 ALG1LQ6GMV1 187 aa5.73□□□□□ -1.49
CCDC93-209ENST00000488908 LILRA2Q8N149 483 aa5.73□□□□□ -1.49
CCDC93-209ENST00000488908 PDZD8Q8NEN9 1154 aa5.73□□□□□ -1.49
CCDC93-209ENST00000488908 FAM8A1Q9UBU6 413 aa5.73□□□□□ -1.49
CCDC93-209ENST00000488908 SPG7Q9UQ90 795 aa5.73□□□□□ -1.49
CCDC93-209ENST00000488908 SEMA7AO75326 666 aa5.72□□□□□ -1.49
CCDC93-209ENST00000488908 DLG4P78352 724 aa5.72□□□□□ -1.49
CCDC93-209ENST00000488908 SV2BQ7L1I2 683 aa5.72□□□□□ -1.49
CCDC93-209ENST00000488908 OXR1Q8N573 874 aa5.72□□□□□ -1.49
CCDC93-209ENST00000488908 BAHD1Q8TBE0 780 aaPredicted RBP5.72□□□□□ -1.49
CCDC93-209ENST00000488908 ZCCHC4Q9H5U6 513 aa5.72□□□□□ -1.49
CCDC93-209ENST00000488908 TACC3Q9Y6A5 838 aa5.72□□□□□ -1.49
CCDC93-209ENST00000488908 PEX10O60683 326 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 BMP7P18075 431 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 LMNB1P20700 586 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 CDK8P49336 464 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 GAB4Q2WGN9 574 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 TTBK2Q6IQ55 1244 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 MRPL41Q8IXM3 137 aaKnown RBP5.71□□□□□ -1.5
CCDC93-209ENST00000488908 SYTL4Q96C24 671 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-209ENST00000488908 MCOLN1Q9GZU1 580 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 DUSP15Q9H1R2 295 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-209ENST00000488908 C19orf44Q9H6X5 657 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 C12orf49Q9H741 205 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 CWC22Q9HCG8 908 aaKnown RBP5.71□□□□□ -1.5
CCDC93-209ENST00000488908 GPATCH2Q9NW75 528 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 DUSP13Q9UII6 198 aa5.71□□□□□ -1.5
CCDC93-209ENST00000488908 FITM1A5D6W6 292 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 WASH4PA8MWX3 477 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 ZGLP1P0C6A0 271 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 USP17L7P0C7H9 530 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 ATP2B2Q01814 1243 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 EGR3Q06889 387 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 SLC6A19Q695T7 634 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 TMEM132EQ6IEE7 984 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 ZNF605Q86T29 641 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 DHX38Q92620 1227 aaKnown RBP5.7□□□□□ -1.5
CCDC93-209ENST00000488908 Q96M66 194 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 DPH2Q9BQC3 489 aaPredicted RBP5.7□□□□□ -1.5
CCDC93-209ENST00000488908 SP110Q9HB58 689 aa5.7□□□□□ -1.5
CCDC93-209ENST00000488908 CNOT6Q9ULM6 557 aaKnown RBP5.7□□□□□ -1.5
CCDC93-209ENST00000488908 TTF2Q9UNY4 1162 aaKnown RBP5.7□□□□□ -1.5
CCDC93-209ENST00000488908 GFRA2O00451 464 aa5.69□□□□□ -1.5
CCDC93-209ENST00000488908 PGRP06401 933 aa5.69□□□□□ -1.5
CCDC93-209ENST00000488908 RPS26P62854 115 aaKnown RBP5.69□□□□□ -1.5
CCDC93-209ENST00000488908 FMR1Q06787 632 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC93-209ENST00000488908 NR0B2Q15466 257 aa5.69□□□□□ -1.5
CCDC93-209ENST00000488908 TCERG1LQ5VWI1 586 aa5.69□□□□□ -1.5
CCDC93-209ENST00000488908 TMEM87BQ96K49 555 aa5.69□□□□□ -1.5
CCDC93-209ENST00000488908 TJP2Q9UDY2 1190 aa5.69□□□□□ -1.5
CCDC93-209ENST00000488908 TEX51A0A1B0GUA7 166 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 MYOCOSA0A1B0GUC4 107 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 RFXAPO00287 272 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 FOXD2O60548 495 aaPredicted RBP5.68□□□□□ -1.5
CCDC93-209ENST00000488908 LTKP29376 864 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 PDE4BQ07343 736 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 ZNF385BQ569K4 471 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 TSPYL5Q86VY4 417 aaPredicted RBP5.68□□□□□ -1.5
CCDC93-209ENST00000488908 ZSCAN29Q8IWY8 852 aaPredicted RBP5.68□□□□□ -1.5
CCDC93-209ENST00000488908 INTS4Q96HW7 963 aaKnown RBP5.68□□□□□ -1.5
CCDC93-209ENST00000488908 SETDB2Q96T68 719 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 GPR62Q9BZJ7 368 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 KCNH3Q9ULD8 1083 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 JAG2Q9Y219 1238 aa5.68□□□□□ -1.5
CCDC93-209ENST00000488908 YBX2Q9Y2T7 364 aaKnown RBP5.68□□□□□ -1.5
CCDC93-209ENST00000488908 A0A0G2JLL6 359 aaPredicted RBP5.67□□□□□ -1.5
CCDC93-209ENST00000488908 RBAK-RBAKDNI3L0D1 243 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 PDE6BP35913 854 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 SEPT6Q14141 434 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 NFIXQ14938 502 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 SNX17Q15036 470 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 TIGD5Q53EQ6 642 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 SPPL2CQ8IUH8 684 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 MCATQ8IVS2 390 aaKnown RBP5.67□□□□□ -1.5
CCDC93-209ENST00000488908 TMEM151BQ8IW70 566 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 RETREG2Q8NC44 543 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 DNAJB8Q8NHS0 232 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 KCNC2Q96PR1 638 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 ZNF552Q9H707 407 aaPredicted RBP5.67□□□□□ -1.5
CCDC93-209ENST00000488908 CEP131Q9UPN4 1083 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 GNEQ9Y223 722 aaKnown RBP5.67□□□□□ -1.5
CCDC93-209ENST00000488908 KCTD3Q9Y597 815 aa5.67□□□□□ -1.5
CCDC93-209ENST00000488908 SYN1P17600 705 aa5.66□□□□□ -1.5
CCDC93-209ENST00000488908 CHRNEQ04844 493 aa5.66□□□□□ -1.5
CCDC93-209ENST00000488908 DUSP4Q13115 394 aa5.66□□□□□ -1.5
CCDC93-209ENST00000488908 MARCH10Q8NA82 808 aaPredicted RBP5.66□□□□□ -1.5
CCDC93-209ENST00000488908 DTWD2Q8NBA8 298 aa5.66□□□□□ -1.5
CCDC93-209ENST00000488908 GPR160Q9UJ42 338 aa5.66□□□□□ -1.5
CCDC93-209ENST00000488908 ADAM30Q9UKF2 790 aa5.66□□□□□ -1.5
CCDC93-209ENST00000488908 WWC3Q9ULE0 1092 aa5.66□□□□□ -1.5
CCDC93-209ENST00000488908 PCDHA11Q9Y5I1 949 aa5.66□□□□□ -1.5
CCDC93-209ENST00000488908 CCDC85BQ15834 202 aaPredicted RBP5.65□□□□□ -1.5
CCDC93-209ENST00000488908 DBX2Q6ZNG2 339 aa5.65□□□□□ -1.5
CCDC93-209ENST00000488908 FRMD6Q96NE9 622 aa5.65□□□□□ -1.5
CCDC93-209ENST00000488908 MIR1-1HGQ9H1L0 117 aa5.65□□□□□ -1.5
CCDC93-209ENST00000488908 GCM1Q9NP62 436 aa5.65□□□□□ -1.5
CCDC93-209ENST00000488908 PCDHB5Q9Y5E4 795 aa5.65□□□□□ -1.5
CCDC93-209ENST00000488908 GTF3C3Q9Y5Q9 886 aa5.65□□□□□ -1.5
CCDC93-209ENST00000488908 ANKS4BQ8N8V4 417 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms