RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 USP17L10C9JJH3 530 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 CDC45O75419 566 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 SLC3A2P08195 630 aaKnown RBP10.54□□□□□ -0.72
SMKR1-202ENST00000488846 HSPA1AP0DMV8 641 aaKnown RBP10.54□□□□□ -0.72
SMKR1-202ENST00000488846 HSPA1BP0DMV9 641 aaKnown RBP10.54□□□□□ -0.72
SMKR1-202ENST00000488846 NOVP48745 357 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 PTH1RQ03431 593 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 CTDSPL2Q05D32 466 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 SPP2Q13103 211 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 SEPT2Q15019 361 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 FASTKD5Q7L8L6 764 aaKnown RBP10.54□□□□□ -0.72
SMKR1-202ENST00000488846 ANKRD23Q86SG2 305 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 FAM43AQ8N2R8 423 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 STAG1Q8WVM7 1258 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 C12orf42Q96LP6 360 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 LSG1Q9H089 658 aaKnown RBP10.54□□□□□ -0.72
SMKR1-202ENST00000488846 KIAA1683Q9H0B3 1180 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 CTNNA3Q9UI47 895 aa10.54□□□□□ -0.72
SMKR1-202ENST00000488846 A0A1W2PRG0 241 aa10.53□□□□□ -0.72
SMKR1-202ENST00000488846 TRIM75PA6NK02 468 aa10.53□□□□□ -0.72
SMKR1-202ENST00000488846 FOXN1O15353 648 aa10.53□□□□□ -0.72
SMKR1-202ENST00000488846 AKNAD1Q5T1N1 836 aa10.53□□□□□ -0.72
SMKR1-202ENST00000488846 OTUD7BQ6GQQ9 843 aa10.53□□□□□ -0.72
SMKR1-202ENST00000488846 NEDD1Q8NHV4 660 aa10.53□□□□□ -0.72
SMKR1-202ENST00000488846 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
SMKR1-202ENST00000488846 KANSL2Q9H9L4 492 aa10.53□□□□□ -0.72
SMKR1-202ENST00000488846 MKNK2Q9HBH9 465 aa10.53□□□□□ -0.72
SMKR1-202ENST00000488846 ZNF213O14771 459 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 PRDM1O75626 825 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 TRPA1O75762 1119 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 HSPA8P11142 646 aaKnown RBP10.52□□□□□ -0.73
SMKR1-202ENST00000488846 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.73
SMKR1-202ENST00000488846 USP14P54578 494 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 MTMR2Q13614 643 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 RAB3GAP1Q15042 981 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 IMMTQ16891 758 aaKnown RBP10.52□□□□□ -0.73
SMKR1-202ENST00000488846 TBC1D10CQ8IV04 446 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 ZNF444Q8N0Y2 327 aaPredicted RBP10.52□□□□□ -0.73
SMKR1-202ENST00000488846 ACER1Q8TDN7 264 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 MKL1Q969V6 931 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 INCENPQ9NQS7 918 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 EMILIN3Q9NT22 766 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 TCP11L1Q9NUJ3 509 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 MTMR4Q9NYA4 1195 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
SMKR1-202ENST00000488846 NYAP2Q9P242 653 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 SYNPO2Q9UMS6 1093 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 AGTPBP1Q9UPW5 1226 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 TMX2Q9Y320 296 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 ADGRA2Q96PE1 1338 aa10.52□□□□□ -0.73
SMKR1-202ENST00000488846 MPHOSPH10O00566 681 aaKnown RBP10.51□□□□□ -0.73
SMKR1-202ENST00000488846 EPB41L2O43491 1005 aaKnown RBP10.51□□□□□ -0.73
SMKR1-202ENST00000488846 CYP21A2P08686 494 aa10.51□□□□□ -0.73
SMKR1-202ENST00000488846 CTCFP49711 727 aaPredicted RBP10.51□□□□□ -0.73
SMKR1-202ENST00000488846 HMGCS2P54868 508 aa10.51□□□□□ -0.73
SMKR1-202ENST00000488846 HAND2P61296 217 aa10.51□□□□□ -0.73
SMKR1-202ENST00000488846 ICA1Q05084 483 aa10.51□□□□□ -0.73
SMKR1-202ENST00000488846 NECTIN1Q15223 517 aa10.51□□□□□ -0.73
SMKR1-202ENST00000488846 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
SMKR1-202ENST00000488846 CASC1Q6TDU7 716 aa10.51□□□□□ -0.73
SMKR1-202ENST00000488846 MFSD6Q6ZSS7 791 aa10.51□□□□□ -0.73
SMKR1-202ENST00000488846 RNF41Q9H4P4 317 aaPredicted RBP10.51□□□□□ -0.73
SMKR1-202ENST00000488846 IL17RBQ9NRM6 502 aa10.51□□□□□ -0.73
SMKR1-202ENST00000488846 PDHXO00330 501 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 EEF2P13639 858 aaKnown RBP10.5□□□□□ -0.73
SMKR1-202ENST00000488846 TFAP4Q01664 338 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 CRHR2Q13324 411 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 DGKZQ13574 1117 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 PPP4R3BQ5MIZ7 849 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 TREML2Q5T2D2 321 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 STK11IPQ8N1F8 1099 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 NKX2-3Q8TAU0 364 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 LPAR1Q92633 364 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 CEP95Q96GE4 821 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 R3HDMLQ9H3Y0 253 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 SH2D4AQ9H788 454 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 VCPKMTQ9H867 229 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 PRDM10Q9NQV6 1147 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 RBM8AQ9Y5S9 174 aaKnown RBP10.5□□□□□ -0.73
SMKR1-202ENST00000488846 NEDD4P46934 1319 aa10.5□□□□□ -0.73
SMKR1-202ENST00000488846 TLR2O60603 784 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 TBC1D8O95759 1140 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 TTLL1O95922 423 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 TSPY3P0CV98 308 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 TSPY8P0CW00 308 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 PABPC4Q13310 644 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMKR1-202ENST00000488846 TAF1CQ15572 869 aaPredicted RBP10.49□□□□□ -0.73
SMKR1-202ENST00000488846 FAM47AQ5JRC9 791 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 KIAA1755Q5JYT7 1200 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 C17orf99Q6UX52 265 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 GADL1Q6ZQY3 521 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 KIAA1211Q6ZU35 1233 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 CLEC10AQ8IUN9 316 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 CNNM2Q9H8M5 875 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 ZFYVE28Q9HCC9 887 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 TMOD4Q9NZQ9 345 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 TAF6LQ9Y6J9 622 aa10.49□□□□□ -0.73
SMKR1-202ENST00000488846 TSPY2A6NKD2 308 aa10.48□□□□□ -0.73
SMKR1-202ENST00000488846 GPR25O00155 361 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms