RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 CAPN2P17655 700 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 PRDX5P30044 214 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 SLC4A3P48751 1232 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 NECAB2Q7Z6G3 386 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 CDAN1Q8IWY9 1227 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 DIS3LQ8TF46 1054 aaKnown RBP14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 NOL10Q9BSC4 688 aaKnown RBP14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 ARMT1Q9H993 441 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 F8W031 263 aaPredicted RBP14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 ZNF213O14771 459 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 FGAP02671 866 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 HSP90AA1P07900 732 aaKnown RBP14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 CYP21A2P08686 494 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 RUFY3Q7L099 469 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 LCORLQ8N3X6 602 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 FAM122AQ96E09 287 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 NEK1Q96PY6 1258 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 UPF3BQ9BZI7 483 aaKnown RBP14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 NAPBQ9H115 298 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 PDRG1Q9NUG6 133 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 JAG2Q9Y219 1238 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 SLC4A4Q9Y6R1 1079 aa14.25□□□□□ -0.13
HLA-DOB-209ENST00000488325 ADGRA2Q96PE1 1338 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 CD2BP2O95400 341 aaKnown RBP14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 BAG3O95817 575 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 INHAP05111 366 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 TDO2P48775 406 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 SNAPC2Q13487 334 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 ANKRD1Q15327 319 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 ADCK5Q3MIX3 580 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 MFSD14BQ5SR56 506 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 GIMAP6Q6P9H5 292 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 MIGA1Q8NAN2 632 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 SYMPKQ92797 1274 aaKnown RBP14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 TEPSINQ96N21 525 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 CRNKL1Q9BZJ0 848 aaKnown RBP14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 CRISPLD2Q9H0B8 497 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 GABRQQ9UN88 632 aa14.24□□□□□ -0.13
HLA-DOB-209ENST00000488325 IRF6O14896 467 aa14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 FOXP2O15409 715 aa14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 ADCY3O60266 1144 aa14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 RPS6KB1P23443 525 aa14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 FKBP1AP62942 108 aaKnown RBP14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 TNFAIP1Q13829 316 aa14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 ERO1BQ86YB8 467 aa14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 IFNL3Q8IZI9 196 aa14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 MAFAQ8NHW3 353 aaPredicted RBP14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 TTC14Q96N46 770 aa14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 RIOK1Q9BRS2 568 aaKnown RBP14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 ALDH8A1Q9H2A2 487 aaPredicted RBP14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 PAK6Q9NQU5 681 aaPredicted RBP14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 SNCAIPQ9Y6H5 919 aa14.23□□□□□ -0.13
HLA-DOB-209ENST00000488325 MROH7-TTC4A0A0A0MT08 1334 aa14.22□□□□□ -0.13
HLA-DOB-209ENST00000488325 GSG1L2A8MUP6 293 aa14.22□□□□□ -0.13
HLA-DOB-209ENST00000488325 E7EWF7 191 aa14.22□□□□□ -0.13
HLA-DOB-209ENST00000488325 ELNP15502 786 aa14.22□□□□□ -0.13
HLA-DOB-209ENST00000488325 PLCG2P16885 1265 aa14.22□□□□□ -0.13
HLA-DOB-209ENST00000488325 RBM5P52756 815 aaKnown RBP eCLIP14.22□□□□□ -0.13
HLA-DOB-209ENST00000488325 FCGRTP55899 365 aa14.22□□□□□ -0.13
HLA-DOB-209ENST00000488325 ADGRA1Q86SQ6 560 aa14.22□□□□□ -0.13
HLA-DOB-209ENST00000488325 ZSCAN31Q96LW9 406 aaPredicted RBP14.22□□□□□ -0.13
HLA-DOB-209ENST00000488325 PPP4CP60510 307 aa14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 DYNLL1P63167 89 aaKnown RBP14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 TRDNQ13061 729 aa14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 RALYLQ86SE5 291 aaKnown RBP14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 ZNF384Q8TF68 577 aa14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 EPB41L4AQ9HCS5 686 aaPredicted RBP14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 SH2B1Q9NRF2 756 aaPredicted RBP14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 ATP8A2Q9NTI2 1148 aa14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 AATFQ9NY61 560 aaKnown RBP eCLIP14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 ZNF70Q9UC06 446 aaPredicted RBP14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 LIMCH1Q9UPQ0 1083 aa14.21□□□□□ -0.13
HLA-DOB-209ENST00000488325 TNFRSF10AO00220 468 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 PDHXO00330 501 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 PRKAB2O43741 272 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 AK2P54819 239 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 HAND2P61296 217 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 PPIL2Q13356 520 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 ZNF697Q5TEC3 545 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 DHX32Q7L7V1 743 aaKnown RBP14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 ANKRD23Q86SG2 305 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 NCOA7Q8NI08 942 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 FAM163AQ96GL9 167 aaPredicted RBP14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 TMEM39BQ9GZU3 492 aa14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 RNF41Q9H4P4 317 aaPredicted RBP14.2□□□□□ -0.14
HLA-DOB-209ENST00000488325 COL2A1P02458 1487 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 GAKO14976 1311 aa14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 CPA1P15085 419 aa14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 FLT3LGP49771 235 aa14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 FGD1P98174 961 aa14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 STOX1Q6ZVD7 989 aa14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 ANKLE1Q8NAG6 615 aa14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 TMX3Q96JJ7 454 aa14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 CDX2Q99626 313 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 TDRD3Q9H7E2 651 aaKnown RBP14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 CNNM2Q9H8M5 875 aa14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 TAF6LQ9Y6J9 622 aa14.19□□□□□ -0.14
HLA-DOB-209ENST00000488325 LAMA4Q16363 1823 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms