RNA–Protein interactions for RNA: ENST00000487976.2

CCDC180-205, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 3,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-205ENST00000487976 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 EZRP15311 586 aaKnown RBP12.13□□□□□ -0.47
CCDC180-205ENST00000487976 ATF3P18847 181 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 KIF23Q02241 960 aaPredicted RBP12.13□□□□□ -0.47
CCDC180-205ENST00000487976 CCNI2Q6ZMN8 369 aaPredicted RBP12.13□□□□□ -0.47
CCDC180-205ENST00000487976 CHST3Q7LGC8 479 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 TRAPPC11Q7Z392 1133 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 CAGE1Q8TC20 777 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 CCDC51Q96ER9 411 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 RPGRIP1Q96KN7 1286 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 MMS19Q96T76 1030 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 CASP14P31944 242 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
CCDC180-205ENST00000487976 SKOR1P84550 965 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 NEXNQ0ZGT2 675 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 PLCB4Q15147 1175 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 SNCBQ16143 134 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 RESP18Q5W5W9 173 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 CCDC70Q6NSX1 233 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 TMTC1Q8IUR5 882 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 SUCLG2Q96I99 432 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 KCNH3Q9ULD8 1083 aa12.13□□□□□ -0.47
CCDC180-205ENST00000487976 COL18A1P39060 1754 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 PPP6R2O75170 966 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 MYBL2P10244 700 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 ZKSCAN8Q15776 578 aaPredicted RBP12.12□□□□□ -0.47
CCDC180-205ENST00000487976 SND1Q7KZF4 910 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC180-205ENST00000487976 YTHDF3Q7Z739 585 aaKnown RBP12.12□□□□□ -0.47
CCDC180-205ENST00000487976 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 CAPZA3Q96KX2 299 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 NLRP2Q9NX02 1062 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 FAM184BQ9ULE4 1060 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 LTBP4Q8N2S1 1624 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 ZNF827Q17R98 1081 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 FILIP1LQ4L180 1135 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 RIC3Q7Z5B4 369 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 SLC40A1Q9NP59 571 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 GJB4Q9NTQ9 266 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 GUCA1BQ9UMX6 200 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 C5P01031 1676 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 CPLX1O14810 134 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 FOXN1O15353 648 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 ZEB2O60315 1214 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 NAP1L1P55209 391 aaKnown RBP12.12□□□□□ -0.47
CCDC180-205ENST00000487976 KAZALD1Q96I82 304 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 SLF1Q9BQI6 1058 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 HDAC6Q9UBN7 1215 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
CCDC180-205ENST00000487976 FAM237AA0A1B0GTK4 181 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 E7EWF7 191 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 ENC1O14682 589 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 RASSF9O75901 435 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 CHGBP05060 677 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 NAA25Q14CX7 972 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 CCDC13Q8IYE1 715 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.11□□□□□ -0.47
CCDC180-205ENST00000487976 MEGF6O75095 1541 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 GOLGA6L7A0A1B0GV03 622 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 IGKV5-2P06315 115 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 POSTNQ15063 836 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 DCAF5Q96JK2 942 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 DDX20Q9UHI6 824 aaKnown RBP12.11□□□□□ -0.47
CCDC180-205ENST00000487976 NDUFB9Q9Y6M9 179 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 MYH8P13535 1937 aa12.11□□□□□ -0.47
CCDC180-205ENST00000487976 RFX7Q2KHR2 1363 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 NEURL1BA8MQ27 555 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 AIMP1Q12904 312 aaKnown RBP12.1□□□□□ -0.47
CCDC180-205ENST00000487976 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 SLC9C2Q5TAH2 1124 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 NAA35Q5VZE5 725 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 CYP26C1Q6V0L0 522 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 EXOC8Q8IYI6 725 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 AENQ8WTP8 325 aaKnown RBP12.1□□□□□ -0.47
CCDC180-205ENST00000487976 CCDC114Q96M63 670 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 METTL22Q9BUU2 404 aaPredicted RBP12.1□□□□□ -0.47
CCDC180-205ENST00000487976 TNS3Q68CZ2 1445 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 TMEM94Q12767 1356 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 PKD1L3Q7Z443 1732 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 KLHL33A6NCF5 533 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 ATP1A2P50993 1020 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 PLCD1P51178 756 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 ERVK-24P63145 666 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 PARP9Q8IXQ6 854 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 SCLT1Q96NL6 688 aa12.1□□□□□ -0.47
CCDC180-205ENST00000487976 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
CCDC180-205ENST00000487976 IRF6O14896 467 aa12.09□□□□□ -0.47
CCDC180-205ENST00000487976 HSF2BPO75031 334 aa12.09□□□□□ -0.47
CCDC180-205ENST00000487976 SRGAP2O75044 1071 aa12.09□□□□□ -0.47
CCDC180-205ENST00000487976 SNRPA1P09661 255 aaKnown RBP12.09□□□□□ -0.47
CCDC180-205ENST00000487976 ATP5JP18859 108 aa12.09□□□□□ -0.47
CCDC180-205ENST00000487976 GBP2P32456 591 aaPredicted RBP12.09□□□□□ -0.47
CCDC180-205ENST00000487976 FXR1P51114 621 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC180-205ENST00000487976 TTC39AQ5SRH9 613 aa12.09□□□□□ -0.47
CCDC180-205ENST00000487976 IQCEQ6IPM2 695 aa12.09□□□□□ -0.47
CCDC180-205ENST00000487976 PAGR1Q9BTK6 254 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms