RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 DSC3Q14574 896 aa6.44□□□□□ -1.38
HMGB1P36-201ENST00000487709 SCARA3Q6AZY7 606 aa6.44□□□□□ -1.38
HMGB1P36-201ENST00000487709 CDH24Q86UP0 819 aa6.44□□□□□ -1.38
HMGB1P36-201ENST00000487709 CREG2Q8IUH2 290 aa6.44□□□□□ -1.38
HMGB1P36-201ENST00000487709 ZSCAN29Q8IWY8 852 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P36-201ENST00000487709 C20orf173Q96LM9 149 aa6.44□□□□□ -1.38
HMGB1P36-201ENST00000487709 OSBPL7Q9BZF2 842 aa6.44□□□□□ -1.38
HMGB1P36-201ENST00000487709 DCTN4Q9UJW0 460 aa6.44□□□□□ -1.38
HMGB1P36-201ENST00000487709 HPXP02790 462 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 GRK4P32298 578 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 CAP2P40123 477 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 KIR3DL1P43629 444 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 MAPK8P45983 427 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 TMPRSS7Q7RTY8 843 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 GAL3ST3Q96A11 431 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 SETDB2Q96T68 719 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 DPH2Q9BQC3 489 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 SRCIN1Q9C0H9 1055 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 C19orf44Q9H6X5 657 aa6.43□□□□□ -1.38
HMGB1P36-201ENST00000487709 TREHO43280 583 aa6.42□□□□□ -1.38
HMGB1P36-201ENST00000487709 CST3P01034 146 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P36-201ENST00000487709 BMP7P18075 431 aa6.42□□□□□ -1.38
HMGB1P36-201ENST00000487709 ZNF605Q86T29 641 aa6.41□□□□□ -1.38
HMGB1P36-201ENST00000487709 RELTQ969Z4 430 aa6.41□□□□□ -1.38
HMGB1P36-201ENST00000487709 COX4I2Q96KJ9 171 aa6.41□□□□□ -1.38
HMGB1P36-201ENST00000487709 ZCCHC4Q9H5U6 513 aa6.41□□□□□ -1.38
HMGB1P36-201ENST00000487709 PARD6AQ9NPB6 346 aa6.41□□□□□ -1.38
HMGB1P36-201ENST00000487709 SNCAIPQ9Y6H5 919 aa6.41□□□□□ -1.38
HMGB1P36-201ENST00000487709 TPP2P29144 1249 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P36-201ENST00000487709 FBF1Q8TES7 1133 aa6.4□□□□□ -1.38
HMGB1P36-201ENST00000487709 MCOLN1Q9GZU1 580 aa6.4□□□□□ -1.38
HMGB1P36-201ENST00000487709 USP17L7P0C7H9 530 aa6.39□□□□□ -1.39
HMGB1P36-201ENST00000487709 SRFP11831 508 aa6.39□□□□□ -1.39
HMGB1P36-201ENST00000487709 ITGAEP38570 1179 aa6.39□□□□□ -1.39
HMGB1P36-201ENST00000487709 DLG4P78352 724 aa6.39□□□□□ -1.39
HMGB1P36-201ENST00000487709 TIGD5Q53EQ6 642 aa6.39□□□□□ -1.39
HMGB1P36-201ENST00000487709 PIWIL2Q8TC59 973 aaKnown RBP6.39□□□□□ -1.39
HMGB1P36-201ENST00000487709 Q96M66 194 aa6.39□□□□□ -1.39
HMGB1P36-201ENST00000487709 TTF2Q9UNY4 1162 aaKnown RBP6.39□□□□□ -1.39
HMGB1P36-201ENST00000487709 EGR3Q06889 387 aa6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 SEPT6Q14141 434 aa6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 TTBK2Q6IQ55 1244 aa6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 BAHD1Q8TBE0 780 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 SLC6A17Q9H1V8 727 aa6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 SP110Q9HB58 689 aa6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 TJP2Q9UDY2 1190 aa6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 DUSP13Q9UII6 198 aa6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 WWC3Q9ULE0 1092 aa6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 JAG2Q9Y219 1238 aa6.38□□□□□ -1.39
HMGB1P36-201ENST00000487709 A0A0G2JLL6 359 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 MYOCOSA0A1B0GUC4 107 aa6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 PGRP06401 933 aa6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 ETV3P41162 512 aa6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 TMEM132EQ6IEE7 984 aa6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 IRF2BP1Q8IU81 584 aa6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 PDZD8Q8NEN9 1154 aa6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 ANKRD24Q8TF21 1146 aa6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 DUSP15Q9H1R2 295 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 TRIT1Q9H3H1 467 aaKnown RBP6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 CNOT6Q9ULM6 557 aaKnown RBP6.37□□□□□ -1.39
HMGB1P36-201ENST00000487709 GIPC1O14908 333 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 ZGLP1P0C6A0 271 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 LMNB1P20700 586 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 LTKP29376 864 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 GAB4Q2WGN9 574 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 TMEM87BQ96K49 555 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 ASB16Q96NS5 453 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 SGPP1Q9BX95 441 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 C12orf49Q9H741 205 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 GPATCH2Q9NW75 528 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 FAM8A1Q9UBU6 413 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 SPG7Q9UQ90 795 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 PCDHB5Q9Y5E4 795 aa6.36□□□□□ -1.39
HMGB1P36-201ENST00000487709 FOXD2O60548 495 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 SEMA7AO75326 666 aa6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 PDE6BP35913 854 aa6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 GALK1P51570 392 aa6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 ATP2B2Q01814 1243 aa6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 ALG1LQ6GMV1 187 aa6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 SV2BQ7L1I2 683 aa6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 MRPL41Q8IXM3 137 aaKnown RBP6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 LILRA2Q8N149 483 aa6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 OXR1Q8N573 874 aa6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 INTS4Q96HW7 963 aaKnown RBP6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 GPR160Q9UJ42 338 aa6.35□□□□□ -1.39
HMGB1P36-201ENST00000487709 FITM1A5D6W6 292 aa6.34□□□□□ -1.39
HMGB1P36-201ENST00000487709 GFRA2O00451 464 aa6.34□□□□□ -1.39
HMGB1P36-201ENST00000487709 FMR1Q06787 632 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGB1P36-201ENST00000487709 TCERG1LQ5VWI1 586 aa6.34□□□□□ -1.39
HMGB1P36-201ENST00000487709 DNAJB8Q8NHS0 232 aa6.34□□□□□ -1.39
HMGB1P36-201ENST00000487709 KCNC2Q96PR1 638 aa6.34□□□□□ -1.39
HMGB1P36-201ENST00000487709 KCTD3Q9Y597 815 aa6.34□□□□□ -1.39
HMGB1P36-201ENST00000487709 PCDHA11Q9Y5I1 949 aa6.34□□□□□ -1.39
HMGB1P36-201ENST00000487709 ANKRD33BA6NCL7 494 aa6.33□□□□□ -1.4
HMGB1P36-201ENST00000487709 NFIXQ14938 502 aa6.33□□□□□ -1.4
HMGB1P36-201ENST00000487709 ZNF385BQ569K4 471 aa6.33□□□□□ -1.4
HMGB1P36-201ENST00000487709 ZNF326Q5BKZ1 582 aaKnown RBP6.33□□□□□ -1.4
HMGB1P36-201ENST00000487709 SLC6A19Q695T7 634 aa6.33□□□□□ -1.4
HMGB1P36-201ENST00000487709 TSPYL5Q86VY4 417 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P36-201ENST00000487709 SYTL4Q96C24 671 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms