RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 FASTKD5Q7L8L6 764 aaKnown RBP13.81□□□□□ -0.2
LINC00996-202ENST00000486954 RALYLQ86SE5 291 aaKnown RBP13.81□□□□□ -0.2
LINC00996-202ENST00000486954 TBC1D10CQ8IV04 446 aa13.81□□□□□ -0.2
LINC00996-202ENST00000486954 ESR2Q92731 530 aa13.81□□□□□ -0.2
LINC00996-202ENST00000486954 WDR18Q9BV38 432 aa13.81□□□□□ -0.2
LINC00996-202ENST00000486954 KRT23Q9C075 422 aa13.81□□□□□ -0.2
LINC00996-202ENST00000486954 KANSL2Q9H9L4 492 aa13.81□□□□□ -0.2
LINC00996-202ENST00000486954 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
LINC00996-202ENST00000486954 ALDH1A1P00352 501 aa13.8□□□□□ -0.2
LINC00996-202ENST00000486954 BACE1P56817 501 aa13.8□□□□□ -0.2
LINC00996-202ENST00000486954 JAG1P78504 1218 aa13.8□□□□□ -0.2
LINC00996-202ENST00000486954 TFAP4Q01664 338 aa13.8□□□□□ -0.2
LINC00996-202ENST00000486954 MTMR2Q13614 643 aa13.8□□□□□ -0.2
LINC00996-202ENST00000486954 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
LINC00996-202ENST00000486954 JMYQ8N9B5 988 aa13.8□□□□□ -0.2
LINC00996-202ENST00000486954 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
LINC00996-202ENST00000486954 ZIC5Q96T25 663 aa13.8□□□□□ -0.2
LINC00996-202ENST00000486954 PTPRFP10586 1907 aa13.8□□□□□ -0.2
LINC00996-202ENST00000486954 GREB1LQ9C091 1923 aaPredicted RBP13.8□□□□□ -0.2
LINC00996-202ENST00000486954 TESPA1A2RU30 521 aaPredicted RBP13.79□□□□□ -0.2
LINC00996-202ENST00000486954 CA12O43570 354 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 CYP21A2P08686 494 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 FGRP09769 529 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 ZKSCAN1P17029 563 aaPredicted RBP13.79□□□□□ -0.2
LINC00996-202ENST00000486954 MCCP23508 829 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 GUCY1A2P33402 732 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 TM4SF4P48230 202 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 HMGCS2P54868 508 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
LINC00996-202ENST00000486954 ZYXQ15942 572 aaKnown RBP13.79□□□□□ -0.2
LINC00996-202ENST00000486954 FAM47AQ5JRC9 791 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 USP17L2Q6R6M4 530 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 IQCA1Q86XH1 822 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 IFNL1Q8IU54 200 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 PROCA1Q8NCQ7 364 aaPredicted RBP13.79□□□□□ -0.2
LINC00996-202ENST00000486954 BRI3BPQ8WY22 251 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 MS4A4AQ96JQ5 239 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 NBPF3Q9H094 633 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 NEDD4P46934 1319 aa13.79□□□□□ -0.2
LINC00996-202ENST00000486954 LOC285556D6RIA3 1793 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 EPB41L2O43491 1005 aaKnown RBP13.78□□□□□ -0.2
LINC00996-202ENST00000486954 TTLL1O95922 423 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 CCDC178Q5BJE1 867 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 SH3D19Q5HYK7 790 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 ANKRD23Q86SG2 305 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 NCOA7Q8NI08 942 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 KIAA1683Q9H0B3 1180 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 GOPCQ9HD26 462 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 ZCCHC17Q9NP64 241 aaKnown RBP13.78□□□□□ -0.2
LINC00996-202ENST00000486954 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
LINC00996-202ENST00000486954 B4E1Z4 1266 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 BTBD19C9JJ37 291 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 SLC27A2O14975 620 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 RAD21O60216 631 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 KDM4AO75164 1064 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 EEF2P13639 858 aaKnown RBP13.77□□□□□ -0.21
LINC00996-202ENST00000486954 TAF1CQ15572 869 aaPredicted RBP13.77□□□□□ -0.21
LINC00996-202ENST00000486954 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 CEP95Q96GE4 821 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 UBAC1Q9BSL1 405 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 INCENPQ9NQS7 918 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 SAGE1Q9NXZ1 904 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 NYAP2Q9P242 653 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 STX8Q9UNK0 236 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 AGTPBP1Q9UPW5 1226 aa13.77□□□□□ -0.21
LINC00996-202ENST00000486954 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 IGKV6D-41A0A0C4DH26 115 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 ERICH2A1L162 156 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 E7EWF7 191 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 IGF2BP3O00425 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC00996-202ENST00000486954 HSPA1AP0DMV8 641 aaKnown RBP13.76□□□□□ -0.21
LINC00996-202ENST00000486954 HSPA1BP0DMV9 641 aaKnown RBP13.76□□□□□ -0.21
LINC00996-202ENST00000486954 KRT32Q14532 448 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
LINC00996-202ENST00000486954 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 ACER1Q8TDN7 264 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 LPAR1Q92633 364 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 C12orf42Q96LP6 360 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 PARK7Q99497 189 aaKnown RBP13.76□□□□□ -0.21
LINC00996-202ENST00000486954 WBP1LQ9NX94 342 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 MTMR4Q9NYA4 1195 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 CLIP2Q9UDT6 1046 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 SYNPO2Q9UMS6 1093 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 SLC45A1Q9Y2W3 748 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 TMX2Q9Y320 296 aa13.76□□□□□ -0.21
LINC00996-202ENST00000486954 PDHXO00330 501 aa13.75□□□□□ -0.21
LINC00996-202ENST00000486954 OSBPP22059 807 aa13.75□□□□□ -0.21
LINC00996-202ENST00000486954 IRX3P78415 501 aaPredicted RBP13.75□□□□□ -0.21
LINC00996-202ENST00000486954 FAM43AQ8N2R8 423 aa13.75□□□□□ -0.21
LINC00996-202ENST00000486954 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.75□□□□□ -0.21
LINC00996-202ENST00000486954 VCPKMTQ9H867 229 aa13.75□□□□□ -0.21
LINC00996-202ENST00000486954 ZFYVE28Q9HCC9 887 aa13.75□□□□□ -0.21
LINC00996-202ENST00000486954 TCP11L1Q9NUJ3 509 aa13.75□□□□□ -0.21
LINC00996-202ENST00000486954 RNF186Q9NXI6 227 aa13.75□□□□□ -0.21
LINC00996-202ENST00000486954 TACC3Q9Y6A5 838 aa13.75□□□□□ -0.21
LINC00996-202ENST00000486954 A0A1W2PRG0 241 aa13.74□□□□□ -0.21
LINC00996-202ENST00000486954 TRPA1O75762 1119 aa13.74□□□□□ -0.21
LINC00996-202ENST00000486954 VCAM1P19320 739 aa13.74□□□□□ -0.21
LINC00996-202ENST00000486954 LRRC47Q8N1G4 583 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms