RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 LIFRP42702 1097 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 ANTXR2P58335 489 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 HSP90B2PQ58FF3 399 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 LY9Q9HBG7 655 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 PAXBP1Q9Y5B6 917 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 SPATA31A1Q5TZJ5 1347 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 ADKP55263 362 aaKnown RBP14.97□□□□□ -0.01
HMGN1-216ENST00000486741 LONRF3Q496Y0 759 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 FCHSD1Q86WN1 690 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 LINC00116Q8NCU8 138 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 OXER1Q8TDS5 423 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 ATP8A2Q9NTI2 1148 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 CACTINQ8WUQ7 758 aaKnown RBP14.97□□□□□ -0.01
HMGN1-216ENST00000486741 BBXQ8WY36 941 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-216ENST00000486741 TSG101Q99816 390 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 MMRN2Q9H8L6 949 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 A0A1W2PQ27 194 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 A0A1W2PQ64 194 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 A0A1W2PQD8 194 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 SMCO2A6NFE2 343 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 SPA17Q15506 151 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 KRT79Q5XKE5 535 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 DYMQ7RTS9 669 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-216ENST00000486741 SLC4A9Q96Q91 983 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 PEAK1Q9H792 1746 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 XDHP47989 1333 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 MMP1P03956 469 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 ST3GAL1Q11201 340 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 DRC1Q96MC2 740 aa14.96□□□□□ -0.01
HMGN1-216ENST00000486741 PYM1Q9BRP8 204 aaKnown RBP14.96□□□□□ -0.01
HMGN1-216ENST00000486741 ZNF500O60304 480 aaPredicted RBP14.96□□□□□ -0.02
HMGN1-216ENST00000486741 CASP1P29466 404 aa14.96□□□□□ -0.02
HMGN1-216ENST00000486741 PPP2R5BQ15173 497 aa14.96□□□□□ -0.02
HMGN1-216ENST00000486741 CCDC181Q5TID7 509 aa14.96□□□□□ -0.02
HMGN1-216ENST00000486741 BLIDQ8IZY5 108 aa14.96□□□□□ -0.02
HMGN1-216ENST00000486741 SYMPKQ92797 1274 aaKnown RBP14.96□□□□□ -0.02
HMGN1-216ENST00000486741 SAMM50Q9Y512 469 aa14.96□□□□□ -0.02
HMGN1-216ENST00000486741 WTIPA6NIX2 430 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 INTS5Q6P9B9 1019 aaKnown RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 IGSF22Q8N9C0 903 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 EPSTI1Q96J88 318 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 BAG1Q99933 345 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 DBNDD1Q9H9R9 158 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 TAB2Q9NYJ8 693 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 RGPD8O14715 1765 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 ATP1A3P13637 1013 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 FAM193AP78312 1265 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 ARID5AQ03989 594 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 TDRD7Q8NHU6 1098 aaKnown RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 KDM4FA0A1W2PPD8 638 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 FDPSP14324 419 aaKnown RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 USH1GQ495M9 461 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 CT47A1Q5JQC4 288 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 USP17L2Q6R6M4 530 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 MLKLQ8NB16 471 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 TRPC5Q9UL62 973 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 PDE4DQ08499 809 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 WWC2Q6AWC2 1192 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 TMCO3Q6UWJ1 677 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 ENAHQ8N8S7 591 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 SH3RF3Q8TEJ3 882 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 EPB41L4AQ9HCS5 686 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-216ENST00000486741 PKD2L1Q9P0L9 805 aa14.95□□□□□ -0.02
HMGN1-216ENST00000486741 KLRK1P26718 216 aa14.94□□□□□ -0.02
HMGN1-216ENST00000486741 SLC1A4P43007 532 aa14.94□□□□□ -0.02
HMGN1-216ENST00000486741 DLG5Q8TDM6 1919 aa14.94□□□□□ -0.02
HMGN1-216ENST00000486741 ATP2B4P23634 1241 aa14.94□□□□□ -0.02
HMGN1-216ENST00000486741 NONOQ15233 471 aaKnown RBP eCLIP14.94□□□□□ -0.02
HMGN1-216ENST00000486741 ZFYVE27Q5T4F4 411 aa14.94□□□□□ -0.02
HMGN1-216ENST00000486741 CTAGE1Q96RT6 745 aa14.94□□□□□ -0.02
HMGN1-216ENST00000486741 RNF26Q9BY78 433 aaPredicted RBP14.94□□□□□ -0.02
HMGN1-216ENST00000486741 SYNRGQ9UMZ2 1314 aa14.94□□□□□ -0.02
HMGN1-216ENST00000486741 MON2Q7Z3U7 1717 aa14.94□□□□□ -0.02
HMGN1-216ENST00000486741 NTSR2O95665 410 aa14.94□□□□□ -0.02
HMGN1-216ENST00000486741 PIK3C2AO00443 1686 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 MYO1BO43795 1136 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 TBC1D7Q9P0N9 293 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 H0YIN7 160 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 IGSF3O75054 1194 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 NFIXQ14938 502 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 LEMD3Q9Y2U8 911 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 SPDYE3A6NKU9 549 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 AKR1B10O60218 316 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 TECP42680 631 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 CACNB3P54284 484 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 LRRC8AQ8IWT6 810 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 STAG1Q8WVM7 1258 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 FERMT2Q96AC1 680 aa14.93□□□□□ -0.02
HMGN1-216ENST00000486741 DCP1AQ9NPI6 582 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-216ENST00000486741 POLR3GO15318 223 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-216ENST00000486741 MATR3P43243 847 aaKnown RBP eCLIP14.92□□□□□ -0.02
HMGN1-216ENST00000486741 SPAG1Q07617 926 aa14.92□□□□□ -0.02
HMGN1-216ENST00000486741 GRAPQ13588 217 aa14.92□□□□□ -0.02
HMGN1-216ENST00000486741 REXO1Q8N1G1 1221 aaKnown RBP14.92□□□□□ -0.02
HMGN1-216ENST00000486741 GRAPLQ8TC17 118 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-216ENST00000486741 TBC1D22AQ8WUA7 517 aa14.92□□□□□ -0.02
HMGN1-216ENST00000486741 RFX7Q2KHR2 1363 aa14.92□□□□□ -0.02
HMGN1-216ENST00000486741 DESI2Q9BSY9 194 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms