RNA–Protein interactions for RNA: ENST00000486078.1

GTF2B-206, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-206ENST00000486078 FAM187AA6NFU0 413 aa6.62□□□□□ -1.35
GTF2B-206ENST00000486078 SSBP05455 408 aaKnown RBP eCLIP6.62□□□□□ -1.35
GTF2B-206ENST00000486078 MZF1P28698 734 aaPredicted RBP6.62□□□□□ -1.35
GTF2B-206ENST00000486078 PAK2Q13177 524 aa6.62□□□□□ -1.35
GTF2B-206ENST00000486078 CLEC4GQ6UXB4 293 aa6.62□□□□□ -1.35
GTF2B-206ENST00000486078 SH3BP5LQ7L8J4 393 aa6.62□□□□□ -1.35
GTF2B-206ENST00000486078 SLC51AQ86UW1 340 aa6.62□□□□□ -1.35
GTF2B-206ENST00000486078 ZNF511Q8NB15 262 aa6.62□□□□□ -1.35
GTF2B-206ENST00000486078 RPGRQ92834 1020 aaKnown RBP6.62□□□□□ -1.35
GTF2B-206ENST00000486078 DCPSQ96C86 337 aaKnown RBP6.62□□□□□ -1.35
GTF2B-206ENST00000486078 SIRPGQ9P1W8 387 aa6.62□□□□□ -1.35
GTF2B-206ENST00000486078 NIP7Q9Y221 180 aaKnown RBP eCLIP6.62□□□□□ -1.35
GTF2B-206ENST00000486078 ZNF652Q9Y2D9 606 aa6.62□□□□□ -1.35
GTF2B-206ENST00000486078 SZT2Q5T011 3432 aa6.62□□□□□ -1.35
GTF2B-206ENST00000486078 MKI67P46013 3256 aaKnown RBP6.61□□□□□ -1.35
GTF2B-206ENST00000486078 BACH1O14867 736 aa6.61□□□□□ -1.35
GTF2B-206ENST00000486078 SIAH2O43255 324 aa6.61□□□□□ -1.35
GTF2B-206ENST00000486078 VARSP26640 1264 aaKnown RBP6.61□□□□□ -1.35
GTF2B-206ENST00000486078 CHMP4BP1P59074 171 aa6.61□□□□□ -1.35
GTF2B-206ENST00000486078 TBC1D10BQ4KMP7 808 aaPredicted RBP6.61□□□□□ -1.35
GTF2B-206ENST00000486078 CCDC146Q8IYE0 955 aa6.61□□□□□ -1.35
GTF2B-206ENST00000486078 ZNF496Q96IT1 587 aaPredicted RBP6.61□□□□□ -1.35
GTF2B-206ENST00000486078 COL25A1Q9BXS0 654 aaPredicted RBP6.61□□□□□ -1.35
GTF2B-206ENST00000486078 TRIM55Q9BYV6 548 aa6.61□□□□□ -1.35
GTF2B-206ENST00000486078 TMX4Q9H1E5 349 aaPredicted RBP6.61□□□□□ -1.35
GTF2B-206ENST00000486078 VPS33BQ9H267 617 aa6.61□□□□□ -1.35
GTF2B-206ENST00000486078 TRIM17Q9Y577 477 aa6.61□□□□□ -1.35
GTF2B-206ENST00000486078 POLR2AP24928 1970 aaKnown RBP6.6□□□□□ -1.35
GTF2B-206ENST00000486078 MRC1P22897 1456 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 HEG1Q9ULI3 1381 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 RBBP6Q7Z6E9 1792 aaKnown RBP6.6□□□□□ -1.35
GTF2B-206ENST00000486078 UBR2Q8IWV8 1755 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 A0A0C4DFX4 3053 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 MAGEB6P1A0A0J9YX57 407 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 AVPP01185 164 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 TM4SF4P48230 202 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 PIP4K2AP48426 406 aaPredicted RBP6.6□□□□□ -1.35
GTF2B-206ENST00000486078 NFX1Q12986 1120 aaKnown RBP6.6□□□□□ -1.35
GTF2B-206ENST00000486078 CRY2Q49AN0 593 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 OTOP1Q7RTM1 612 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 GJD3Q8N144 294 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 MPNDQ8N594 471 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 PRPF38AQ8NAV1 312 aaKnown RBP6.6□□□□□ -1.35
GTF2B-206ENST00000486078 EHBP1Q8NDI1 1231 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 SUPT20HQ8NEM7 779 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 PMM1Q92871 262 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 CDCA5Q96FF9 252 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 RBM17Q96I25 401 aaKnown RBP6.6□□□□□ -1.35
GTF2B-206ENST00000486078 SEC16BQ96JE7 1060 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 PCGF6Q9BYE7 350 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 R3HDMLQ9H3Y0 253 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 TYW1Q9NV66 732 aaKnown RBP6.6□□□□□ -1.35
GTF2B-206ENST00000486078 GABBR1Q9UBS5 961 aa6.6□□□□□ -1.35
GTF2B-206ENST00000486078 PRAMEF22A3QJZ6 481 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 LCE2BO14633 110 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 TNFRSF10BO14763 440 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 CDC45O75419 566 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 EGFRP00533 1210 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 NEFLP07196 543 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 SMPD1P17405 629 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 HOXA10P31260 410 aaPredicted RBP6.59□□□□□ -1.35
GTF2B-206ENST00000486078 LINC01559Q495D7 138 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 COX20Q5RI15 118 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 FMNL3Q8IVF7 1028 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 SLC10A4Q96EP9 437 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 CFHR5Q9BXR6 569 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 POLIQ9UNA4 740 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 PTPN22Q9Y2R2 807 aa6.59□□□□□ -1.35
GTF2B-206ENST00000486078 UBE2Q2LH0YL09 131 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 PDGFRBP09619 1106 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 TAF1CQ15572 869 aaPredicted RBP6.58□□□□□ -1.36
GTF2B-206ENST00000486078 ARSHQ5FYA8 562 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 ZNF790Q6PG37 636 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 DPP8Q6V1X1 898 aaPredicted RBP6.58□□□□□ -1.36
GTF2B-206ENST00000486078 MOB2Q70IA6 237 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 BPHLQ86WA6 291 aaPredicted RBP6.58□□□□□ -1.36
GTF2B-206ENST00000486078 RASGRP4Q8TDF6 673 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 STAG1Q8WVM7 1258 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 DPF3Q92784 378 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 FMNL2Q96PY5 1086 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 CRAMP1Q96RY5 1269 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 SPOCK3Q9BQ16 436 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 NYXQ9GZU5 481 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 GEMIN8Q9NWZ8 242 aaKnown RBP6.58□□□□□ -1.36
GTF2B-206ENST00000486078 COL6A3P12111 3177 aa6.58□□□□□ -1.36
GTF2B-206ENST00000486078 ABCC12Q96J65 1359 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 KIF7Q2M1P5 1343 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 YDJCA8MPS7 323 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 J3QL48 77 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 GIPC1O14908 333 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 PRC1O43663 620 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
GTF2B-206ENST00000486078 ALDH1A1P00352 501 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 SMCPP49901 116 aaPredicted RBP6.57□□□□□ -1.36
GTF2B-206ENST00000486078 TBX4P57082 545 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 FKBP1BP68106 108 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 AMPD3Q01432 767 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 KIAA2012Q0VF49 1180 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 SREBF2Q12772 1141 aa6.57□□□□□ -1.36
GTF2B-206ENST00000486078 AGERQ15109 404 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms