RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 LPAR1Q92633 364 aa23.65■■□□□ 1.38
CHRD-216ENST00000486066 DDX20Q9UHI6 824 aaKnown RBP23.65■■□□□ 1.38
CHRD-216ENST00000486066 USP17L15C9J2P7 530 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 USP17L13C9JLJ4 530 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 USP17L11C9JVI0 530 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 USP17L18D6R9N7 530 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 USP17L22D6RA61 530 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 USP17L17D6RBQ6 530 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 USP17L19D6RCP7 530 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 USP17L20D6RJB6 530 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 GH2P01242 217 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 USP17L24Q0WX57 530 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 TNNI3KQ59H18 835 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 DBNDD2Q9BQY9 259 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 BTBD7Q9P203 1132 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 FPGT-TNNI3KV9GXZ4 949 aa23.64■■□□□ 1.37
CHRD-216ENST00000486066 DNM1LO00429 736 aa23.63■■□□□ 1.37
CHRD-216ENST00000486066 GNAI2P04899 355 aa23.63■■□□□ 1.37
CHRD-216ENST00000486066 DYNLL1P63167 89 aaKnown RBP23.63■■□□□ 1.37
CHRD-216ENST00000486066 G3BP1Q13283 466 aaKnown RBP eCLIP23.63■■□□□ 1.37
CHRD-216ENST00000486066 POLA2Q14181 598 aa23.63■■□□□ 1.37
CHRD-216ENST00000486066 NPLOC4Q8TAT6 608 aa23.63■■□□□ 1.37
CHRD-216ENST00000486066 SENP6Q9GZR1 1112 aaPredicted RBP23.63■■□□□ 1.37
CHRD-216ENST00000486066 KIAA1683Q9H0B3 1180 aa23.63■■□□□ 1.37
CHRD-216ENST00000486066 EHD4Q9H223 541 aa23.63■■□□□ 1.37
CHRD-216ENST00000486066 PIH1D3Q9NQM4 214 aaKnown RBP23.63■■□□□ 1.37
CHRD-216ENST00000486066 SAP30BPQ9UHR5 308 aaKnown RBP23.63■■□□□ 1.37
CHRD-216ENST00000486066 TNNQ9UQP3 1299 aa23.63■■□□□ 1.37
CHRD-216ENST00000486066 MSCO60682 206 aa23.62■■□□□ 1.37
CHRD-216ENST00000486066 CYBAP13498 195 aa23.62■■□□□ 1.37
CHRD-216ENST00000486066 TRIM27P14373 513 aa23.62■■□□□ 1.37
CHRD-216ENST00000486066 VCAM1P19320 739 aa23.62■■□□□ 1.37
CHRD-216ENST00000486066 CCNA1P78396 465 aa23.62■■□□□ 1.37
CHRD-216ENST00000486066 MFSD14CQ5VZR4 134 aa23.62■■□□□ 1.37
CHRD-216ENST00000486066 HLA-DOAP06340 250 aa23.61■■□□□ 1.37
CHRD-216ENST00000486066 CCAR1Q8IX12 1150 aaKnown RBP23.61■■□□□ 1.37
CHRD-216ENST00000486066 SPDYE16A6NNV3 312 aaPredicted RBP23.6■■□□□ 1.37
CHRD-216ENST00000486066 GLRX3O76003 335 aaKnown RBP23.6■■□□□ 1.37
CHRD-216ENST00000486066 ZAP70P43403 619 aa23.6■■□□□ 1.37
CHRD-216ENST00000486066 SNX17Q15036 470 aa23.6■■□□□ 1.37
CHRD-216ENST00000486066 TTC39AQ5SRH9 613 aa23.6■■□□□ 1.37
CHRD-216ENST00000486066 ACER1Q8TDN7 264 aa23.6■■□□□ 1.37
CHRD-216ENST00000486066 TRIM34Q9BYJ4 488 aa23.6■■□□□ 1.37
CHRD-216ENST00000486066 NDUFB9Q9Y6M9 179 aa23.6■■□□□ 1.37
CHRD-216ENST00000486066 PARP14Q460N5 1801 aa23.59■■□□□ 1.37
CHRD-216ENST00000486066 CYP2C19P33261 490 aa23.59■■□□□ 1.37
CHRD-216ENST00000486066 GUCY1A2P33402 732 aa23.59■■□□□ 1.37
CHRD-216ENST00000486066 USP14P54578 494 aa23.59■■□□□ 1.37
CHRD-216ENST00000486066 RTP1P59025 263 aa23.59■■□□□ 1.37
CHRD-216ENST00000486066 ATF7IPQ6VMQ6 1270 aa23.59■■□□□ 1.37
CHRD-216ENST00000486066 SSH3Q8TE77 659 aa23.59■■□□□ 1.37
CHRD-216ENST00000486066 DBNLQ9UJU6 430 aaKnown RBP23.59■■□□□ 1.37
CHRD-216ENST00000486066 ATN1P54259 1190 aaPredicted RBP23.58■■□□□ 1.37
CHRD-216ENST00000486066 CCDC158Q5M9N0 1113 aa23.58■■□□□ 1.37
CHRD-216ENST00000486066 LBHD1Q9BQE6 289 aaPredicted RBP23.58■■□□□ 1.37
CHRD-216ENST00000486066 SERPINB13Q9UIV8 391 aa23.58■■□□□ 1.37
CHRD-216ENST00000486066 SHMT1P34896 483 aa23.57■■□□□ 1.36
CHRD-216ENST00000486066 ZYXQ15942 572 aaKnown RBP23.57■■□□□ 1.36
CHRD-216ENST00000486066 OLFML2BQ68BL8 750 aa23.57■■□□□ 1.36
CHRD-216ENST00000486066 FAM161BQ96MY7 647 aa23.57■■□□□ 1.36
CHRD-216ENST00000486066 NAV1Q8NEY1 1877 aa23.56■■□□□ 1.36
CHRD-216ENST00000486066 CYP7A1P22680 504 aa23.56■■□□□ 1.36
CHRD-216ENST00000486066 ATP2B2Q01814 1243 aa23.56■■□□□ 1.36
CHRD-216ENST00000486066 SHHQ15465 462 aa23.56■■□□□ 1.36
CHRD-216ENST00000486066 C9orf50Q5SZB4 431 aa23.56■■□□□ 1.36
CHRD-216ENST00000486066 ZNF697Q5TEC3 545 aa23.56■■□□□ 1.36
CHRD-216ENST00000486066 CERS3Q8IU89 383 aa23.56■■□□□ 1.36
CHRD-216ENST00000486066 CDX2Q99626 313 aaPredicted RBP23.56■■□□□ 1.36
CHRD-216ENST00000486066 FEZ1Q99689 392 aa23.56■■□□□ 1.36
CHRD-216ENST00000486066 GABPAQ06546 454 aa23.55■■□□□ 1.36
CHRD-216ENST00000486066 SLC39A5Q6ZMH5 540 aa23.55■■□□□ 1.36
CHRD-216ENST00000486066 TLR7Q9NYK1 1049 aaKnown RBP23.55■■□□□ 1.36
CHRD-216ENST00000486066 NOP58Q9Y2X3 529 aaKnown RBP23.55■■□□□ 1.36
CHRD-216ENST00000486066 CHD9Q3L8U1 2897 aa23.55■■□□□ 1.36
CHRD-216ENST00000486066 PLCD1P51178 756 aa23.54■■□□□ 1.36
CHRD-216ENST00000486066 CERKLQ49MI3 558 aaPredicted RBP23.54■■□□□ 1.36
CHRD-216ENST00000486066 GJC2Q5T442 439 aaPredicted RBP23.54■■□□□ 1.36
CHRD-216ENST00000486066 C1orf53Q5VUE5 145 aa23.54■■□□□ 1.36
CHRD-216ENST00000486066 MIGA1Q8NAN2 632 aa23.54■■□□□ 1.36
CHRD-216ENST00000486066 MOV10L1Q9BXT6 1211 aaKnown RBP23.54■■□□□ 1.36
CHRD-216ENST00000486066 TTYH1Q9H313 450 aaPredicted RBP23.54■■□□□ 1.36
CHRD-216ENST00000486066 SEMA6BQ9H3T3 888 aa23.54■■□□□ 1.36
CHRD-216ENST00000486066 RPAP3Q9H6T3 665 aaPredicted RBP23.54■■□□□ 1.36
CHRD-216ENST00000486066 ZNFX1Q9P2E3 1918 aaKnown RBP23.54■■□□□ 1.36
CHRD-216ENST00000486066 SMCHD1A6NHR9 2005 aa23.54■■□□□ 1.36
CHRD-216ENST00000486066 RAB3GAP1Q15042 981 aa23.53■■□□□ 1.36
CHRD-216ENST00000486066 ABCB5Q2M3G0 1257 aa23.53■■□□□ 1.36
CHRD-216ENST00000486066 RIOK1Q9BRS2 568 aaKnown RBP23.53■■□□□ 1.36
CHRD-216ENST00000486066 CWC22Q9HCG8 908 aaKnown RBP23.53■■□□□ 1.36
CHRD-216ENST00000486066 PDLIM7Q9NR12 457 aa23.53■■□□□ 1.36
CHRD-216ENST00000486066 IVNS1ABPQ9Y6Y0 642 aa23.53■■□□□ 1.36
CHRD-216ENST00000486066 A0A1W2PRG0 241 aa23.52■■□□□ 1.36
CHRD-216ENST00000486066 SEPT4O43236 478 aa23.52■■□□□ 1.36
CHRD-216ENST00000486066 COBLO75128 1261 aa23.52■■□□□ 1.36
CHRD-216ENST00000486066 ADORA2AP29274 412 aa23.52■■□□□ 1.36
CHRD-216ENST00000486066 CNGA1P29973 690 aa23.52■■□□□ 1.36
CHRD-216ENST00000486066 ATP8B2P98198 1209 aa23.52■■□□□ 1.36
CHRD-216ENST00000486066 TMED8Q6PL24 325 aaPredicted RBP23.52■■□□□ 1.36
CHRD-216ENST00000486066 SHCBP1Q8NEM2 672 aa23.52■■□□□ 1.36
CHRD-216ENST00000486066 EAF2Q96CJ1 260 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms