RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 A0A0G2JLL6 359 aaPredicted RBP27.98■■■□□ 2.07
ABCF3-216ENST00000485921 TSPY2A6NKD2 308 aa27.98■■■□□ 2.07
ABCF3-216ENST00000485921 REC8O95072 547 aa27.98■■■□□ 2.07
ABCF3-216ENST00000485921 MAP2K1Q02750 393 aaPredicted RBP27.98■■■□□ 2.07
ABCF3-216ENST00000485921 PRRT2Q7Z6L0 340 aaPredicted RBP27.98■■■□□ 2.07
ABCF3-216ENST00000485921 CLEC10AQ8IUN9 316 aa27.98■■■□□ 2.07
ABCF3-216ENST00000485921 ACER1Q8TDN7 264 aa27.98■■■□□ 2.07
ABCF3-216ENST00000485921 USP17L10C9JJH3 530 aa27.97■■■□□ 2.07
ABCF3-216ENST00000485921 BACE1P56817 501 aa27.97■■■□□ 2.07
ABCF3-216ENST00000485921 ICA1Q05084 483 aa27.97■■■□□ 2.07
ABCF3-216ENST00000485921 MTMR2Q13614 643 aa27.97■■■□□ 2.07
ABCF3-216ENST00000485921 NECTIN1Q15223 517 aa27.97■■■□□ 2.07
ABCF3-216ENST00000485921 PTPN18Q99952 460 aa27.97■■■□□ 2.07
ABCF3-216ENST00000485921 CREB3L3Q68CJ9 461 aa27.96■■■□□ 2.07
ABCF3-216ENST00000485921 IFNL1Q8IU54 200 aa27.96■■■□□ 2.07
ABCF3-216ENST00000485921 SIAH1Q8IUQ4 282 aa27.96■■■□□ 2.07
ABCF3-216ENST00000485921 FEZ1Q99689 392 aa27.96■■■□□ 2.07
ABCF3-216ENST00000485921 PLIN4Q96Q06 1357 aa27.96■■■□□ 2.07
ABCF3-216ENST00000485921 IGKV6D-41A0A0C4DH26 115 aa27.95■■■□□ 2.06
ABCF3-216ENST00000485921 C19orf81C9J6K1 198 aa27.95■■■□□ 2.06
ABCF3-216ENST00000485921 SLC27A2O14975 620 aa27.95■■■□□ 2.06
ABCF3-216ENST00000485921 EEF2P13639 858 aaKnown RBP27.95■■■□□ 2.06
ABCF3-216ENST00000485921 HMGCS2P54868 508 aa27.95■■■□□ 2.06
ABCF3-216ENST00000485921 MOGSQ13724 837 aa27.95■■■□□ 2.06
ABCF3-216ENST00000485921 FASTKD5Q7L8L6 764 aaKnown RBP27.95■■■□□ 2.06
ABCF3-216ENST00000485921 ESR2Q92731 530 aa27.95■■■□□ 2.06
ABCF3-216ENST00000485921 CNNM2Q9H8M5 875 aa27.95■■■□□ 2.06
ABCF3-216ENST00000485921 ARHGEF10LQ9HCE6 1279 aa27.95■■■□□ 2.06
ABCF3-216ENST00000485921 TAF6LQ9Y6J9 622 aa27.95■■■□□ 2.06
ABCF3-216ENST00000485921 A0A1W2PRG0 241 aa27.94■■■□□ 2.06
ABCF3-216ENST00000485921 IGF2BP3O00425 579 aaKnown RBP eCLIP27.94■■■□□ 2.06
ABCF3-216ENST00000485921 ATP2B2Q01814 1243 aa27.94■■■□□ 2.06
ABCF3-216ENST00000485921 SH3D19Q5HYK7 790 aa27.94■■■□□ 2.06
ABCF3-216ENST00000485921 GADL1Q6ZQY3 521 aa27.94■■■□□ 2.06
ABCF3-216ENST00000485921 NKX2-3Q8TAU0 364 aa27.94■■■□□ 2.06
ABCF3-216ENST00000485921 CEP95Q96GE4 821 aa27.94■■■□□ 2.06
ABCF3-216ENST00000485921 KRT23Q9C075 422 aa27.94■■■□□ 2.06
ABCF3-216ENST00000485921 KIAA1683Q9H0B3 1180 aa27.94■■■□□ 2.06
ABCF3-216ENST00000485921 GREB1LQ9C091 1923 aaPredicted RBP27.93■■■□□ 2.06
ABCF3-216ENST00000485921 B4E1Z4 1266 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 E7EWF7 191 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 NT5C2P49902 561 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 DGKZQ13574 1117 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 RNF20Q5VTR2 975 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 OTUD7BQ6GQQ9 843 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 USP17L2Q6R6M4 530 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 WBP1LQ9NX94 342 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 MTMR4Q9NYA4 1195 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 TMOD4Q9NZQ9 345 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 NYAP2Q9P242 653 aa27.93■■■□□ 2.06
ABCF3-216ENST00000485921 BTBD19C9JJ37 291 aa27.92■■■□□ 2.06
ABCF3-216ENST00000485921 KDM4AO75164 1064 aa27.92■■■□□ 2.06
ABCF3-216ENST00000485921 USP14P54578 494 aa27.92■■■□□ 2.06
ABCF3-216ENST00000485921 TRDNQ13061 729 aa27.92■■■□□ 2.06
ABCF3-216ENST00000485921 ZYXQ15942 572 aaKnown RBP27.92■■■□□ 2.06
ABCF3-216ENST00000485921 PROCA1Q8NCQ7 364 aaPredicted RBP27.92■■■□□ 2.06
ABCF3-216ENST00000485921 BEGAINQ9BUH8 593 aa27.92■■■□□ 2.06
ABCF3-216ENST00000485921 IL17RBQ9NRM6 502 aa27.92■■■□□ 2.06
ABCF3-216ENST00000485921 EMILIN3Q9NT22 766 aa27.92■■■□□ 2.06
ABCF3-216ENST00000485921 NMT2O60551 498 aa27.91■■■□□ 2.06
ABCF3-216ENST00000485921 GPAT2Q6NUI2 795 aa27.91■■■□□ 2.06
ABCF3-216ENST00000485921 STOX1Q6ZVD7 989 aa27.91■■■□□ 2.06
ABCF3-216ENST00000485921 ANKRD23Q86SG2 305 aa27.91■■■□□ 2.06
ABCF3-216ENST00000485921 FAM43AQ8N2R8 423 aa27.91■■■□□ 2.06
ABCF3-216ENST00000485921 SH2D4AQ9H788 454 aa27.91■■■□□ 2.06
ABCF3-216ENST00000485921 RNF186Q9NXI6 227 aa27.91■■■□□ 2.06
ABCF3-216ENST00000485921 CLIP2Q9UDT6 1046 aa27.91■■■□□ 2.06
ABCF3-216ENST00000485921 TMX2Q9Y320 296 aa27.91■■■□□ 2.06
ABCF3-216ENST00000485921 PCNTO95613 3336 aa27.9■■■□□ 2.06
ABCF3-216ENST00000485921 PTPRFP10586 1907 aa27.9■■■□□ 2.06
ABCF3-216ENST00000485921 EPB41L2O43491 1005 aaKnown RBP27.9■■■□□ 2.06
ABCF3-216ENST00000485921 TTLL1O95922 423 aa27.9■■■□□ 2.06
ABCF3-216ENST00000485921 TCP11L1Q9NUJ3 509 aa27.9■■■□□ 2.06
ABCF3-216ENST00000485921 ZSWIM5Q9P217 1185 aa27.9■■■□□ 2.06
ABCF3-216ENST00000485921 ALDH1A1P00352 501 aa27.89■■■□□ 2.06
ABCF3-216ENST00000485921 PPP4R3BQ5MIZ7 849 aa27.89■■■□□ 2.06
ABCF3-216ENST00000485921 NCOA7Q8NI08 942 aa27.89■■■□□ 2.06
ABCF3-216ENST00000485921 USP26Q9BXU7 913 aa27.89■■■□□ 2.06
ABCF3-216ENST00000485921 AGTPBP1Q9UPW5 1226 aa27.89■■■□□ 2.06
ABCF3-216ENST00000485921 TRPA1O75762 1119 aa27.88■■■□□ 2.05
ABCF3-216ENST00000485921 TREML2Q5T2D2 321 aa27.88■■■□□ 2.05
ABCF3-216ENST00000485921 RALYLQ86SE5 291 aaKnown RBP27.88■■■□□ 2.05
ABCF3-216ENST00000485921 MKL1Q969V6 931 aa27.88■■■□□ 2.05
ABCF3-216ENST00000485921 C12orf42Q96LP6 360 aa27.88■■■□□ 2.05
ABCF3-216ENST00000485921 ZCCHC17Q9NP64 241 aaKnown RBP27.88■■■□□ 2.05
ABCF3-216ENST00000485921 PDHXO00330 501 aa27.87■■■□□ 2.05
ABCF3-216ENST00000485921 EIF5BO60841 1220 aaKnown RBP27.87■■■□□ 2.05
ABCF3-216ENST00000485921 HSPA4P34932 840 aa27.87■■■□□ 2.05
ABCF3-216ENST00000485921 C8orf34Q49A92 452 aa27.87■■■□□ 2.05
ABCF3-216ENST00000485921 ZKSCAN3Q9BRR0 538 aa27.87■■■□□ 2.05
ABCF3-216ENST00000485921 VCPKMTQ9H867 229 aa27.87■■■□□ 2.05
ABCF3-216ENST00000485921 STX8Q9UNK0 236 aa27.87■■■□□ 2.05
ABCF3-216ENST00000485921 ZKSCAN1P17029 563 aaPredicted RBP27.86■■■□□ 2.05
ABCF3-216ENST00000485921 IQCA1Q86XH1 822 aa27.86■■■□□ 2.05
ABCF3-216ENST00000485921 RASEFQ8IZ41 740 aa27.86■■■□□ 2.05
ABCF3-216ENST00000485921 GOPCQ9HD26 462 aa27.86■■■□□ 2.05
ABCF3-216ENST00000485921 SAGE1Q9NXZ1 904 aa27.86■■■□□ 2.05
ABCF3-216ENST00000485921 CA12O43570 354 aa27.85■■■□□ 2.05
ABCF3-216ENST00000485921 NOVP48745 357 aa27.85■■■□□ 2.05
ABCF3-216ENST00000485921 TSGA10IPQ3SY00 556 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms