RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 RBM8AQ9Y5S9 174 aaKnown RBP11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 SLC3A2P08195 630 aaKnown RBP11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 CYP21A2P08686 494 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 PTPRAP18433 802 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 GUCY1A2P33402 732 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 PPATQ06203 517 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 PDE4BQ07343 736 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 TAF1CQ15572 869 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 IMMTQ16891 758 aaKnown RBP11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 CERKLQ49MI3 558 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 AKNAD1Q5T1N1 836 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 KCNB2Q92953 911 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 ERO1AQ96HE7 468 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 PTPN18Q99952 460 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 ZFYVE28Q9HCC9 887 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 KCNH4Q9UQ05 1017 aa11.06□□□□□ -0.64
SHROOM3-207ENST00000485780 PARP14Q460N5 1801 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 ZNF213O14771 459 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 IRF6O14896 467 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 HAND2P61296 217 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 CTDSPL2Q05D32 466 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 ABCB5Q2M3G0 1257 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 SHROOM1Q2M3G4 852 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 TSGA10IPQ3SY00 556 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 TMEM179Q6ZVK1 233 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 RNF41Q9H4P4 317 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 PICK1Q9NRD5 415 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 TRIM17Q9Y577 477 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 NEDD4P46934 1319 aa11.05□□□□□ -0.64
SHROOM3-207ENST00000485780 SLC27A2O14975 620 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 EIF5BO60841 1220 aaKnown RBP11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 GDF11O95390 407 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 GH2P01242 217 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 AKR1B1P15121 316 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 HSPA4P34932 840 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 NOVP48745 357 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 SP3Q02447 781 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 ARHGEF6Q15052 776 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 FBXO46Q6PJ61 603 aaPredicted RBP11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 FAM43AQ8N2R8 423 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 CD99L2Q8TCZ2 262 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 WDR18Q9BV38 432 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 ZCCHC17Q9NP64 241 aaKnown RBP11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 AFG3L2Q9Y4W6 797 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 TAF6LQ9Y6J9 622 aa11.04□□□□□ -0.64
SHROOM3-207ENST00000485780 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 PRDM1O75626 825 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 MFSD6Q6ZSS7 791 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 STOX1Q6ZVD7 989 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 NEDD1Q8NHV4 660 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 NKX2-3Q8TAU0 364 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 IL17RAQ96F46 866 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 CNNM2Q9H8M5 875 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 EFCC1Q9HA90 598 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 MKNK2Q9HBH9 465 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 CABP5Q9NP86 173 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 INCENPQ9NQS7 918 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 TCP11L1Q9NUJ3 509 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 SYNPO2Q9UMS6 1093 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 RLFQ13129 1914 aa11.03□□□□□ -0.64
SHROOM3-207ENST00000485780 BTBD19C9JJ37 291 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 CXCL11O14625 94 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 HOXD11P31277 338 aaPredicted RBP11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 SOX10P56693 466 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 MLLT1Q03111 559 aaPredicted RBP11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 MOGSQ13724 837 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 KIF22Q14807 665 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 SEPT2Q15019 361 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 SH3D19Q5HYK7 790 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 OTOP1Q7RTM1 612 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 SIAH1Q8IUQ4 282 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 KANSL2Q9H9L4 492 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 AS3MTQ9HBK9 375 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 ZHX2Q9Y6X8 837 aa11.02□□□□□ -0.65
SHROOM3-207ENST00000485780 A0A0G2JLL6 359 aaPredicted RBP11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 E7EWF7 191 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 ICA1Q05084 483 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 PRRT2Q7Z6L0 340 aaPredicted RBP11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 ANKRD23Q86SG2 305 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 CCDC84Q86UT8 332 aaPredicted RBP11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 MB21D2Q8IYB1 491 aaPredicted RBP11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 ZNF444Q8N0Y2 327 aaPredicted RBP11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 STK11IPQ8N1F8 1099 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 ESR2Q92731 530 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 CEP95Q96GE4 821 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 C12orf42Q96LP6 360 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 MTA3Q9BTC8 594 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 KRT23Q9C075 422 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 KIAA1683Q9H0B3 1180 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 IL17RBQ9NRM6 502 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms