RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 HMGCRP04035 888 aa10.66□□□□□ -0.7
DDX39B-221ENST00000484566 NFIAQ12857 509 aa10.66□□□□□ -0.7
DDX39B-221ENST00000484566 PUM3Q15397 648 aaKnown RBP10.66□□□□□ -0.7
DDX39B-221ENST00000484566 CDC42EP5Q6NZY7 148 aa10.66□□□□□ -0.7
DDX39B-221ENST00000484566 SLC4A10Q6U841 1118 aa10.66□□□□□ -0.7
DDX39B-221ENST00000484566 PRR14Q9BWN1 585 aa10.66□□□□□ -0.7
DDX39B-221ENST00000484566 SEMA6BQ9H3T3 888 aa10.66□□□□□ -0.7
DDX39B-221ENST00000484566 C11orf49Q9H6J7 331 aa10.66□□□□□ -0.7
DDX39B-221ENST00000484566 DAGLAQ9Y4D2 1042 aa10.66□□□□□ -0.7
DDX39B-221ENST00000484566 TCF20Q9UGU0 1960 aaKnown RBP10.65□□□□□ -0.7
DDX39B-221ENST00000484566 VAMP4O75379 141 aa10.65□□□□□ -0.7
DDX39B-221ENST00000484566 SYN1P17600 705 aa10.65□□□□□ -0.7
DDX39B-221ENST00000484566 PTPRAP18433 802 aa10.65□□□□□ -0.7
DDX39B-221ENST00000484566 FAM110CQ1W6H9 321 aa10.65□□□□□ -0.7
DDX39B-221ENST00000484566 ANKRD13CQ8N6S4 541 aa10.65□□□□□ -0.7
DDX39B-221ENST00000484566 MYLIPQ8WY64 445 aa10.65□□□□□ -0.7
DDX39B-221ENST00000484566 HMX1Q9NP08 348 aaPredicted RBP10.65□□□□□ -0.7
DDX39B-221ENST00000484566 LRRFIP2Q9Y608 721 aaKnown RBP10.65□□□□□ -0.7
DDX39B-221ENST00000484566 CACNA1GO43497 2377 aa10.64□□□□□ -0.71
DDX39B-221ENST00000484566 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
DDX39B-221ENST00000484566 SLC5A1P13866 664 aa10.64□□□□□ -0.71
DDX39B-221ENST00000484566 DIXDC1Q155Q3 683 aa10.64□□□□□ -0.71
DDX39B-221ENST00000484566 LRRC24Q50LG9 513 aa10.64□□□□□ -0.71
DDX39B-221ENST00000484566 ZSCAN29Q8IWY8 852 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-221ENST00000484566 VGLL2Q8N8G2 317 aa10.64□□□□□ -0.71
DDX39B-221ENST00000484566 BICC1Q9H694 974 aaKnown RBP10.64□□□□□ -0.71
DDX39B-221ENST00000484566 USP40Q9NVE5 1235 aa10.64□□□□□ -0.71
DDX39B-221ENST00000484566 AGTPBP1Q9UPW5 1226 aa10.64□□□□□ -0.71
DDX39B-221ENST00000484566 AFG3L2Q9Y4W6 797 aa10.64□□□□□ -0.71
DDX39B-221ENST00000484566 PHIPQ8WWQ0 1821 aa10.63□□□□□ -0.71
DDX39B-221ENST00000484566 MYH2Q9UKX2 1941 aa10.63□□□□□ -0.71
DDX39B-221ENST00000484566 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
DDX39B-221ENST00000484566 EXOSC9Q06265 439 aaKnown RBP10.63□□□□□ -0.71
DDX39B-221ENST00000484566 RABL6Q3YEC7 729 aaPredicted RBP10.63□□□□□ -0.71
DDX39B-221ENST00000484566 ADAMTS19Q8TE59 1207 aa10.63□□□□□ -0.71
DDX39B-221ENST00000484566 ATRNL1Q5VV63 1379 aa10.63□□□□□ -0.71
DDX39B-221ENST00000484566 PHF20L1A8MW92 1017 aa10.62□□□□□ -0.71
DDX39B-221ENST00000484566 CTNND1O60716 968 aaKnown RBP10.62□□□□□ -0.71
DDX39B-221ENST00000484566 ENTPD3O75355 529 aa10.62□□□□□ -0.71
DDX39B-221ENST00000484566 NBPF7P0C2Y1 421 aaPredicted RBP10.62□□□□□ -0.71
DDX39B-221ENST00000484566 PRDX5P30044 214 aa10.62□□□□□ -0.71
DDX39B-221ENST00000484566 GCLCP48506 637 aaPredicted RBP10.62□□□□□ -0.71
DDX39B-221ENST00000484566 RGS3P49796 1198 aa10.62□□□□□ -0.71
DDX39B-221ENST00000484566 PABPC4Q13310 644 aaKnown RBP eCLIP10.62□□□□□ -0.714e-35■■■□□ 18.4
DDX39B-221ENST00000484566 KMT5BQ4FZB7 885 aa10.62□□□□□ -0.71
DDX39B-221ENST00000484566 LPIN2Q92539 896 aa10.62□□□□□ -0.71
DDX39B-221ENST00000484566 KAZALD1Q96I82 304 aa10.62□□□□□ -0.71
DDX39B-221ENST00000484566 UHRF1Q96T88 793 aaPredicted RBP10.62□□□□□ -0.71
DDX39B-221ENST00000484566 GNL3LQ9NVN8 582 aaKnown RBP10.62□□□□□ -0.71
DDX39B-221ENST00000484566 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
DDX39B-221ENST00000484566 UTYO14607 1347 aa10.61□□□□□ -0.71
DDX39B-221ENST00000484566 FOSL2P15408 326 aa10.61□□□□□ -0.71
DDX39B-221ENST00000484566 FGFR2P21802 821 aa10.61□□□□□ -0.71
DDX39B-221ENST00000484566 CLCN1P35523 988 aa10.61□□□□□ -0.71
DDX39B-221ENST00000484566 ZFPM1Q8IX07 1006 aa10.61□□□□□ -0.71
DDX39B-221ENST00000484566 USP38Q8NB14 1042 aa10.61□□□□□ -0.71
DDX39B-221ENST00000484566 PROCA1Q8NCQ7 364 aaPredicted RBP10.61□□□□□ -0.71
DDX39B-221ENST00000484566 ATXN2LQ8WWM7 1075 aaKnown RBP10.61□□□□□ -0.71
DDX39B-221ENST00000484566 PHOX2BQ99453 314 aa10.61□□□□□ -0.71
DDX39B-221ENST00000484566 IDI2Q9BXS1 227 aa10.61□□□□□ -0.71
DDX39B-221ENST00000484566 OGDHLQ9ULD0 1010 aa10.61□□□□□ -0.71
DDX39B-221ENST00000484566 TREML2Q5T2D2 321 aa10.6□□□□□ -0.71
DDX39B-221ENST00000484566 WDR63Q8IWG1 891 aa10.6□□□□□ -0.71
DDX39B-221ENST00000484566 ZGPATQ8N5A5 531 aaKnown RBP10.6□□□□□ -0.71
DDX39B-221ENST00000484566 ANKRD44Q8N8A2 993 aa10.6□□□□□ -0.71
DDX39B-221ENST00000484566 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
DDX39B-221ENST00000484566 KLHDC4Q8TBB5 520 aa10.6□□□□□ -0.71
DDX39B-221ENST00000484566 ASB2Q96Q27 587 aa10.6□□□□□ -0.71
DDX39B-221ENST00000484566 RFX7Q2KHR2 1363 aa10.6□□□□□ -0.71
DDX39B-221ENST00000484566 PFASO15067 1338 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 SALL1Q9NSC2 1324 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 CFAP54Q96N23 3096 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 ATAD5Q96QE3 1844 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 MDM2Q00987 491 aaPredicted RBP10.59□□□□□ -0.71
DDX39B-221ENST00000484566 FOXK2Q01167 660 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 TRIM32Q13049 653 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 PICALMQ13492 652 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 CCDC84Q86UT8 332 aaPredicted RBP10.59□□□□□ -0.71
DDX39B-221ENST00000484566 DZIP1Q86YF9 867 aaKnown RBP10.59□□□□□ -0.71
DDX39B-221ENST00000484566 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 TRIB2Q92519 343 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 TBC1D2Q9BYX2 928 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 DENND2AQ9ULE3 1009 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 WDFY4Q6ZS81 3184 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 MYO9BQ13459 2157 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 DNAH12Q6ZR08 3092 aa10.59□□□□□ -0.71
DDX39B-221ENST00000484566 DDTLA6NHG4 134 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-221ENST00000484566 EYA2O00167 538 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 CENPBP07199 599 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-221ENST00000484566 ZKSCAN1P17029 563 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-221ENST00000484566 CYP2B6P20813 491 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 MAP3K10Q02779 954 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 PDE3AQ14432 1141 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 ATP2B3Q16720 1220 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 SH3BP5LQ7L8J4 393 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 TRMT44Q8IYL2 757 aaKnown RBP10.58□□□□□ -0.72
DDX39B-221ENST00000484566 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 NLRP7Q8WX94 980 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 LBHD1Q9BQE6 289 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms