RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 USP48Q86UV5 1035 aa8.47□□□□□ -1.05
CCDC66-219ENST00000484441 METTL16Q86W50 562 aaKnown RBP8.47□□□□□ -1.05
CCDC66-219ENST00000484441 KIAA0825Q8IV33 1275 aa8.47□□□□□ -1.05
CCDC66-219ENST00000484441 REXO1Q8N1G1 1221 aaKnown RBP8.47□□□□□ -1.05
CCDC66-219ENST00000484441 RNF34Q969K3 372 aa8.47□□□□□ -1.05
CCDC66-219ENST00000484441 EAF1Q96JC9 268 aaPredicted RBP8.47□□□□□ -1.05
CCDC66-219ENST00000484441 CEP131Q9UPN4 1083 aa8.47□□□□□ -1.05
CCDC66-219ENST00000484441 ST14Q9Y5Y6 855 aa8.47□□□□□ -1.05
CCDC66-219ENST00000484441 IRAK1P51617 712 aa8.46□□□□□ -1.06
CCDC66-219ENST00000484441 ASB11Q8WXH4 323 aa8.46□□□□□ -1.06
CCDC66-219ENST00000484441 SPON2Q9BUD6 331 aa8.46□□□□□ -1.06
CCDC66-219ENST00000484441 SEMA3GQ9NS98 782 aa8.46□□□□□ -1.06
CCDC66-219ENST00000484441 CCDC9Q9Y3X0 531 aaKnown RBP8.46□□□□□ -1.06
CCDC66-219ENST00000484441 PCDHB14Q9Y5E9 798 aa8.46□□□□□ -1.06
CCDC66-219ENST00000484441 CHURC1-FNTBB4DL54 471 aa8.45□□□□□ -1.06
CCDC66-219ENST00000484441 CD96P40200 585 aa8.45□□□□□ -1.06
CCDC66-219ENST00000484441 APOBRQ0VD83 1088 aa8.45□□□□□ -1.06
CCDC66-219ENST00000484441 ZNF394Q53GI3 561 aa8.45□□□□□ -1.06
CCDC66-219ENST00000484441 DDX41Q9UJV9 622 aaKnown RBP8.45□□□□□ -1.06
CCDC66-219ENST00000484441 RACK1P63244 317 aaKnown RBP8.44□□□□□ -1.06
CCDC66-219ENST00000484441 SEZ6Q53EL9 994 aa8.44□□□□□ -1.06
CCDC66-219ENST00000484441 THAP5Q7Z6K1 395 aa8.44□□□□□ -1.06
CCDC66-219ENST00000484441 PIWIL2Q8TC59 973 aaKnown RBP8.44□□□□□ -1.06
CCDC66-219ENST00000484441 Q96M66 194 aa8.44□□□□□ -1.06
CCDC66-219ENST00000484441 GMIPQ9P107 970 aa8.44□□□□□ -1.06
CCDC66-219ENST00000484441 KLHL3Q9UH77 587 aa8.44□□□□□ -1.06
CCDC66-219ENST00000484441 PCDHGB7Q9Y5F8 929 aa8.44□□□□□ -1.06
CCDC66-219ENST00000484441 SLC22A31A6NKX4 558 aa8.43□□□□□ -1.06
CCDC66-219ENST00000484441 MEIS3P2A8K0S8 358 aa8.43□□□□□ -1.06
CCDC66-219ENST00000484441 RBAK-RBAKDNI3L0D1 243 aa8.43□□□□□ -1.06
CCDC66-219ENST00000484441 TNK2Q07912 1038 aa8.43□□□□□ -1.06
CCDC66-219ENST00000484441 ANGEL2Q5VTE6 544 aaKnown RBP8.43□□□□□ -1.06
CCDC66-219ENST00000484441 CDCP2Q5VXM1 449 aa8.43□□□□□ -1.06
CCDC66-219ENST00000484441 RNF141Q8WVD5 230 aa8.43□□□□□ -1.06
CCDC66-219ENST00000484441 CCDC74BQ96LY2 380 aa8.43□□□□□ -1.06
CCDC66-219ENST00000484441 FAM155AB1AL88 458 aaPredicted RBP8.42□□□□□ -1.06
CCDC66-219ENST00000484441 CLCQ05315 142 aa8.42□□□□□ -1.06
CCDC66-219ENST00000484441 MLECQ14165 292 aa8.42□□□□□ -1.06
CCDC66-219ENST00000484441 PLCL1Q15111 1095 aa8.42□□□□□ -1.06
CCDC66-219ENST00000484441 NKD1Q969G9 470 aa8.42□□□□□ -1.06
CCDC66-219ENST00000484441 HSPA12BQ96MM6 686 aa8.42□□□□□ -1.06
CCDC66-219ENST00000484441 ADAMTS6Q9UKP5 1117 aa8.42□□□□□ -1.06
CCDC66-219ENST00000484441 RGS13O14921 159 aa8.41□□□□□ -1.06
CCDC66-219ENST00000484441 CBX7O95931 251 aa8.41□□□□□ -1.06
CCDC66-219ENST00000484441 TAL1P17542 331 aaPredicted RBP8.41□□□□□ -1.06
CCDC66-219ENST00000484441 ITGB5P18084 799 aa8.41□□□□□ -1.06
CCDC66-219ENST00000484441 ZNF165P49910 485 aa8.41□□□□□ -1.06
CCDC66-219ENST00000484441 HDLBPQ00341 1268 aaKnown RBP8.41□□□□□ -1.06
CCDC66-219ENST00000484441 ZNF792Q3KQV3 632 aa8.41□□□□□ -1.06
CCDC66-219ENST00000484441 OVOS1Q6IE37 1185 aa8.41□□□□□ -1.06
CCDC66-219ENST00000484441 BAHD1Q8TBE0 780 aaPredicted RBP8.41□□□□□ -1.06
CCDC66-219ENST00000484441 VWCEQ96DN2 955 aa8.41□□□□□ -1.06
CCDC66-219ENST00000484441 CNNM2Q9H8M5 875 aa8.41□□□□□ -1.06
CCDC66-219ENST00000484441 SRFP11831 508 aa8.4□□□□□ -1.06
CCDC66-219ENST00000484441 MBNL3Q9NUK0 354 aaKnown RBP8.4□□□□□ -1.06
CCDC66-219ENST00000484441 LMCD1Q9NZU5 365 aa8.4□□□□□ -1.06
CCDC66-219ENST00000484441 H3BS24 57 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 UBOX5O94941 541 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 RNASE1P07998 156 aaKnown RBP8.39□□□□□ -1.07
CCDC66-219ENST00000484441 ARSHQ5FYA8 562 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 CDKAL1Q5VV42 579 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 SLC23A3Q6PIS1 610 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 GK5Q6ZS86 529 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 PHACTR4Q8IZ21 702 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 DTWD2Q8NBA8 298 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 TMEM40Q8WWA1 233 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 ATG4CQ96DT6 458 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 KREMEN1Q96MU8 473 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 ASPNQ9BXN1 380 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 ATP13A1Q9HD20 1204 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 ZNRF3Q9ULT6 936 aa8.39□□□□□ -1.07
CCDC66-219ENST00000484441 IKZF1Q13422 519 aa8.38□□□□□ -1.07
CCDC66-219ENST00000484441 LRRFIP1Q32MZ4 808 aaKnown RBP8.38□□□□□ -1.07
CCDC66-219ENST00000484441 ZNF654Q8IZM8 581 aa8.38□□□□□ -1.07
CCDC66-219ENST00000484441 KIF2CQ99661 725 aa8.38□□□□□ -1.07
CCDC66-219ENST00000484441 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
CCDC66-219ENST00000484441 GPR62Q9BZJ7 368 aa8.38□□□□□ -1.07
CCDC66-219ENST00000484441 DUSP15Q9H1R2 295 aaPredicted RBP8.38□□□□□ -1.07
CCDC66-219ENST00000484441 TNFRSF10CO14798 259 aa8.37□□□□□ -1.07
CCDC66-219ENST00000484441 CCNFP41002 786 aa8.37□□□□□ -1.07
CCDC66-219ENST00000484441 ZP2Q05996 745 aa8.37□□□□□ -1.07
CCDC66-219ENST00000484441 GAB4Q2WGN9 574 aa8.37□□□□□ -1.07
CCDC66-219ENST00000484441 NLRC3Q7RTR2 1065 aa8.37□□□□□ -1.07
CCDC66-219ENST00000484441 NT5DC4Q86YG4 428 aa8.37□□□□□ -1.07
CCDC66-219ENST00000484441 NME1P15531 152 aaKnown RBP8.36□□□□□ -1.07
CCDC66-219ENST00000484441 RAG1P15918 1043 aa8.36□□□□□ -1.07
CCDC66-219ENST00000484441 MCM4P33991 863 aa8.36□□□□□ -1.07
CCDC66-219ENST00000484441 TNNI2P48788 182 aa8.36□□□□□ -1.07
CCDC66-219ENST00000484441 PI4K2BQ8TCG2 481 aa8.36□□□□□ -1.07
CCDC66-219ENST00000484441 RASGRP4Q8TDF6 673 aa8.36□□□□□ -1.07
CCDC66-219ENST00000484441 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC66-219ENST00000484441 ANTXR1Q9H6X2 564 aa8.36□□□□□ -1.07
CCDC66-219ENST00000484441 KCNH3Q9ULD8 1083 aa8.36□□□□□ -1.07
CCDC66-219ENST00000484441 PAPLNO95428 1278 aa8.35□□□□□ -1.07
CCDC66-219ENST00000484441 IMPDH2P12268 514 aa8.35□□□□□ -1.07
CCDC66-219ENST00000484441 JUNBP17275 347 aaPredicted RBP8.35□□□□□ -1.07
CCDC66-219ENST00000484441 GJA8P48165 433 aa8.35□□□□□ -1.07
CCDC66-219ENST00000484441 PAK2Q13177 524 aa8.35□□□□□ -1.07
CCDC66-219ENST00000484441 COL9A2Q14055 689 aaPredicted RBP8.35□□□□□ -1.07
CCDC66-219ENST00000484441 TMPRSS7Q7RTY8 843 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms