RNA–Protein interactions for RNA: ENST00000484160.1

SH2D3C-211, Transcript of SH2 domain containing 3C, humanhuman

TSL 2

Gene SH2D3C, Length 463 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-211ENST00000484160 TFAP4Q01664 338 aa23.3■■□□□ 1.32
SH2D3C-211ENST00000484160 ATP2B2Q01814 1243 aa23.3■■□□□ 1.32
SH2D3C-211ENST00000484160 GADL1Q6ZQY3 521 aa23.3■■□□□ 1.32
SH2D3C-211ENST00000484160 CCDC84Q86UT8 332 aaPredicted RBP23.3■■□□□ 1.32
SH2D3C-211ENST00000484160 KRT23Q9C075 422 aa23.3■■□□□ 1.32
SH2D3C-211ENST00000484160 MTMR2Q13614 643 aa23.29■■□□□ 1.32
SH2D3C-211ENST00000484160 MS4A4AQ96JQ5 239 aa23.29■■□□□ 1.32
SH2D3C-211ENST00000484160 LSG1Q9H089 658 aaKnown RBP23.29■■□□□ 1.32
SH2D3C-211ENST00000484160 A0A0G2JLL6 359 aaPredicted RBP23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 BACE1P56817 501 aa23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 JAG1P78504 1218 aa23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 PABPC4Q13310 644 aaKnown RBP eCLIP23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 USP17L2Q6R6M4 530 aa23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 PRRT2Q7Z6L0 340 aaPredicted RBP23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 RALYLQ86SE5 291 aaKnown RBP23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 IFNL1Q8IU54 200 aa23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 ZIC5Q96T25 663 aa23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.28■■□□□ 1.32
SH2D3C-211ENST00000484160 PHIPQ8WWQ0 1821 aa23.27■■□□□ 1.32
SH2D3C-211ENST00000484160 TESPA1A2RU30 521 aaPredicted RBP23.27■■□□□ 1.32
SH2D3C-211ENST00000484160 HMGCS2P54868 508 aa23.27■■□□□ 1.32
SH2D3C-211ENST00000484160 SHROOM1Q2M3G4 852 aaPredicted RBP23.27■■□□□ 1.32
SH2D3C-211ENST00000484160 FAM47AQ5JRC9 791 aa23.27■■□□□ 1.32
SH2D3C-211ENST00000484160 IQCA1Q86XH1 822 aa23.27■■□□□ 1.32
SH2D3C-211ENST00000484160 TBC1D10CQ8IV04 446 aa23.27■■□□□ 1.32
SH2D3C-211ENST00000484160 PROCA1Q8NCQ7 364 aaPredicted RBP23.27■■□□□ 1.32
SH2D3C-211ENST00000484160 NEDD1Q8NHV4 660 aa23.27■■□□□ 1.32
SH2D3C-211ENST00000484160 FGRP09769 529 aa23.26■■□□□ 1.31
SH2D3C-211ENST00000484160 ZKSCAN1P17029 563 aaPredicted RBP23.26■■□□□ 1.31
SH2D3C-211ENST00000484160 ZYXQ15942 572 aaKnown RBP23.26■■□□□ 1.31
SH2D3C-211ENST00000484160 CCDC178Q5BJE1 867 aa23.26■■□□□ 1.31
SH2D3C-211ENST00000484160 BRI3BPQ8WY22 251 aa23.26■■□□□ 1.31
SH2D3C-211ENST00000484160 GOPCQ9HD26 462 aa23.26■■□□□ 1.31
SH2D3C-211ENST00000484160 ZCCHC17Q9NP64 241 aaKnown RBP23.26■■□□□ 1.31
SH2D3C-211ENST00000484160 RAD21O60216 631 aa23.25■■□□□ 1.31
SH2D3C-211ENST00000484160 TTLL1O95922 423 aa23.25■■□□□ 1.31
SH2D3C-211ENST00000484160 MCCP23508 829 aa23.25■■□□□ 1.31
SH2D3C-211ENST00000484160 GUCY1A2P33402 732 aa23.25■■□□□ 1.31
SH2D3C-211ENST00000484160 ANKRD23Q86SG2 305 aa23.25■■□□□ 1.31
SH2D3C-211ENST00000484160 KIAA1683Q9H0B3 1180 aa23.25■■□□□ 1.31
SH2D3C-211ENST00000484160 SAGE1Q9NXZ1 904 aa23.25■■□□□ 1.31
SH2D3C-211ENST00000484160 PNMA3Q9UL41 463 aa23.25■■□□□ 1.31
SH2D3C-211ENST00000484160 PLIN4Q96Q06 1357 aa23.25■■□□□ 1.31
SH2D3C-211ENST00000484160 CYP21A2P08686 494 aa23.24■■□□□ 1.31
SH2D3C-211ENST00000484160 EEF2P13639 858 aaKnown RBP23.24■■□□□ 1.31
SH2D3C-211ENST00000484160 SH3D19Q5HYK7 790 aa23.24■■□□□ 1.31
SH2D3C-211ENST00000484160 NCOA7Q8NI08 942 aa23.24■■□□□ 1.31
SH2D3C-211ENST00000484160 INCENPQ9NQS7 918 aa23.24■■□□□ 1.31
SH2D3C-211ENST00000484160 WBP1LQ9NX94 342 aa23.24■■□□□ 1.31
SH2D3C-211ENST00000484160 NYAP2Q9P242 653 aa23.24■■□□□ 1.31
SH2D3C-211ENST00000484160 BTBD19C9JJ37 291 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 EPB41L2O43491 1005 aaKnown RBP23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 TRPA1O75762 1119 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 TAF1CQ15572 869 aaPredicted RBP23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 CEP95Q96GE4 821 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 UBAC1Q9BSL1 405 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 NBPF3Q9H094 633 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 MTMR4Q9NYA4 1195 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 CLIP2Q9UDT6 1046 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 STX8Q9UNK0 236 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 AGTPBP1Q9UPW5 1226 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 NEDD4P46934 1319 aa23.23■■□□□ 1.31
SH2D3C-211ENST00000484160 B4E1Z4 1266 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 PDHXO00330 501 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 KDM4AO75164 1064 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 OSBPP22059 807 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 SART3Q15020 963 aaKnown RBP23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 CREB3L3Q68CJ9 461 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 ACER1Q8TDN7 264 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 LPAR1Q92633 364 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 PARK7Q99497 189 aaKnown RBP23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 ZFYVE28Q9HCC9 887 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 RNF186Q9NXI6 227 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 SYNPO2Q9UMS6 1093 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 SLC45A1Q9Y2W3 748 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 TMX2Q9Y320 296 aa23.22■■□□□ 1.31
SH2D3C-211ENST00000484160 PTPRFP10586 1907 aa23.21■■□□□ 1.31
SH2D3C-211ENST00000484160 ERICH2A1L162 156 aa23.21■■□□□ 1.31
SH2D3C-211ENST00000484160 IGF2BP3O00425 579 aaKnown RBP eCLIP23.21■■□□□ 1.31
SH2D3C-211ENST00000484160 SLC27A2O14975 620 aa23.21■■□□□ 1.31
SH2D3C-211ENST00000484160 HSPA1AP0DMV8 641 aaKnown RBP23.21■■□□□ 1.31
SH2D3C-211ENST00000484160 HSPA1BP0DMV9 641 aaKnown RBP23.21■■□□□ 1.31
SH2D3C-211ENST00000484160 KRT32Q14532 448 aa23.21■■□□□ 1.31
SH2D3C-211ENST00000484160 CLEC10AQ8IUN9 316 aa23.21■■□□□ 1.31
SH2D3C-211ENST00000484160 TCP11L1Q9NUJ3 509 aa23.21■■□□□ 1.31
SH2D3C-211ENST00000484160 E7EWF7 191 aa23.2■■□□□ 1.3
SH2D3C-211ENST00000484160 IRX3P78415 501 aaPredicted RBP23.2■■□□□ 1.3
SH2D3C-211ENST00000484160 NECTIN1Q15223 517 aa23.2■■□□□ 1.3
SH2D3C-211ENST00000484160 FAM43AQ8N2R8 423 aa23.2■■□□□ 1.3
SH2D3C-211ENST00000484160 SMCR8Q8TEV9 937 aaPredicted RBP23.2■■□□□ 1.3
SH2D3C-211ENST00000484160 PTPN18Q99952 460 aa23.2■■□□□ 1.3
SH2D3C-211ENST00000484160 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.2■■□□□ 1.3
SH2D3C-211ENST00000484160 VCPKMTQ9H867 229 aa23.2■■□□□ 1.3
SH2D3C-211ENST00000484160 GREB1LQ9C091 1923 aaPredicted RBP23.2■■□□□ 1.3
SH2D3C-211ENST00000484160 IGKV6D-41A0A0C4DH26 115 aa23.19■■□□□ 1.3
SH2D3C-211ENST00000484160 C12orf42Q96LP6 360 aa23.19■■□□□ 1.3
SH2D3C-211ENST00000484160 TTC14Q96N46 770 aa23.19■■□□□ 1.3
SH2D3C-211ENST00000484160 MYH4Q9Y623 1939 aa23.18■■□□□ 1.3
SH2D3C-211ENST00000484160 CTCFP49711 727 aaPredicted RBP23.18■■□□□ 1.3
SH2D3C-211ENST00000484160 EMILIN3Q9NT22 766 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms