RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 C7orf69Q9H7B7 122 aa8.7□□□□□ -1.02
RIF1-210ENST00000484077 GPRASP1Q5JY77 1395 aa8.7□□□□□ -1.02
RIF1-210ENST00000484077 DLGAP3O95886 979 aa8.69□□□□□ -1.02
RIF1-210ENST00000484077 PPP2R3AQ06190 1150 aa8.69□□□□□ -1.02
RIF1-210ENST00000484077 SOX4Q06945 474 aaPredicted RBP8.69□□□□□ -1.02
RIF1-210ENST00000484077 NFIAQ12857 509 aa8.69□□□□□ -1.02
RIF1-210ENST00000484077 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
RIF1-210ENST00000484077 ARTNQ5T4W7 220 aa8.69□□□□□ -1.02
RIF1-210ENST00000484077 FRMD6Q96NE9 622 aa8.69□□□□□ -1.02
RIF1-210ENST00000484077 DBNDD2Q9BQY9 259 aa8.69□□□□□ -1.02
RIF1-210ENST00000484077 YIPF2Q9BWQ6 316 aa8.69□□□□□ -1.02
RIF1-210ENST00000484077 RGS17Q9UGC6 210 aaPredicted RBP8.69□□□□□ -1.02
RIF1-210ENST00000484077 PHRF1Q9P1Y6 1649 aaKnown RBP8.69□□□□□ -1.02
RIF1-210ENST00000484077 AKAP12Q02952 1782 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 SCO2A0A1W2PP80 73 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 MAPK8P45983 427 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 FCGRTP55899 365 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 BEND4Q6ZU67 534 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 SND1Q7KZF4 910 aaKnown RBP eCLIP8.68□□□□□ -1.02
RIF1-210ENST00000484077 ANKRD24Q8TF21 1146 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 NPHP3Q7Z494 1330 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 CLSPNQ9HAW4 1339 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 PNPLA6Q8IY17 1366 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 NRKQ7Z2Y5 1582 aa8.68□□□□□ -1.02
RIF1-210ENST00000484077 MAP4P27816 1152 aaKnown RBP8.67□□□□□ -1.02
RIF1-210ENST00000484077 XPCQ01831 940 aaPredicted RBP8.67□□□□□ -1.02
RIF1-210ENST00000484077 PLCH1Q4KWH8 1693 aa8.67□□□□□ -1.02
RIF1-210ENST00000484077 TNS3Q68CZ2 1445 aa8.67□□□□□ -1.02
RIF1-210ENST00000484077 MON2Q7Z3U7 1717 aa8.67□□□□□ -1.02
RIF1-210ENST00000484077 TRIM42Q8IWZ5 723 aa8.67□□□□□ -1.02
RIF1-210ENST00000484077 HIRIP3Q9BW71 556 aaPredicted RBP8.67□□□□□ -1.02
RIF1-210ENST00000484077 KCNF1Q9H3M0 494 aa8.67□□□□□ -1.02
RIF1-210ENST00000484077 CENPJQ9HC77 1338 aaPredicted RBP8.67□□□□□ -1.02
RIF1-210ENST00000484077 ZFP64Q9NPA5 681 aa8.67□□□□□ -1.02
RIF1-210ENST00000484077 KRT82Q9NSB4 513 aa8.67□□□□□ -1.02
RIF1-210ENST00000484077 TMEM39AQ9NV64 488 aa8.67□□□□□ -1.02
RIF1-210ENST00000484077 PPM1HQ9ULR3 514 aa8.67□□□□□ -1.02
RIF1-210ENST00000484077 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.66□□□□□ -1.02
RIF1-210ENST00000484077 SPATA31A6Q5VVP1 1343 aa8.66□□□□□ -1.02
RIF1-210ENST00000484077 ADH5P11766 374 aa8.66□□□□□ -1.02
RIF1-210ENST00000484077 GSTT1P30711 240 aa8.66□□□□□ -1.02
RIF1-210ENST00000484077 FAAP100Q0VG06 881 aa8.66□□□□□ -1.02
RIF1-210ENST00000484077 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
RIF1-210ENST00000484077 C2CD4AQ8NCU7 369 aaPredicted RBP8.66□□□□□ -1.02
RIF1-210ENST00000484077 RAD18Q9NS91 495 aa8.66□□□□□ -1.02
RIF1-210ENST00000484077 SPG7Q9UQ90 795 aa8.66□□□□□ -1.02
RIF1-210ENST00000484077 SBNO2Q9Y2G9 1366 aa8.65□□□□□ -1.02
RIF1-210ENST00000484077 PRR36Q9H6K5 1346 aa8.65□□□□□ -1.02
RIF1-210ENST00000484077 HMX2A2RU54 273 aa8.65□□□□□ -1.02
RIF1-210ENST00000484077 USP11P51784 963 aa8.65□□□□□ -1.02
RIF1-210ENST00000484077 CPSF6Q16630 551 aaKnown RBP eCLIP8.65□□□□□ -1.02
RIF1-210ENST00000484077 NBPF8Q3BBV2 869 aa8.65□□□□□ -1.02
RIF1-210ENST00000484077 NXPE4Q6UWF7 544 aa8.65□□□□□ -1.02
RIF1-210ENST00000484077 GIMAP7Q8NHV1 300 aa8.65□□□□□ -1.02
RIF1-210ENST00000484077 EZH1Q92800 747 aaPredicted RBP8.65□□□□□ -1.02
RIF1-210ENST00000484077 GPN3Q9UHW5 284 aaPredicted RBP8.65□□□□□ -1.02
RIF1-210ENST00000484077 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.64□□□□□ -1.03
RIF1-210ENST00000484077 CTSBP07858 339 aa8.64□□□□□ -1.03
RIF1-210ENST00000484077 SGO2Q562F6 1265 aa8.64□□□□□ -1.03
RIF1-210ENST00000484077 MEX3CQ5U5Q3 659 aaKnown RBP8.64□□□□□ -1.03
RIF1-210ENST00000484077 PAOXQ6QHF9 649 aa8.64□□□□□ -1.03
RIF1-210ENST00000484077 ZDHHC13Q8IUH4 622 aa8.64□□□□□ -1.03
RIF1-210ENST00000484077 AEBP1Q8IUX7 1158 aa8.64□□□□□ -1.03
RIF1-210ENST00000484077 LRRC59Q96AG4 307 aaKnown RBP8.64□□□□□ -1.03
RIF1-210ENST00000484077 CEP44Q9C0F1 390 aa8.64□□□□□ -1.03
RIF1-210ENST00000484077 GSX1Q9H4S2 264 aaPredicted RBP8.64□□□□□ -1.03
RIF1-210ENST00000484077 PPIP5K1Q6PFW1 1433 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 NWD2Q9ULI1 1742 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 MYOM1P52179 1685 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 FAM95CA0A1B0GW59 222 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 AOC2O75106 756 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 PDE3AQ14432 1141 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 XP32Q5T750 250 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 INTS5Q6P9B9 1019 aaKnown RBP8.63□□□□□ -1.03
RIF1-210ENST00000484077 C3orf58Q8NDZ4 430 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 EMILIN2Q9BXX0 1053 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 NRAPQ86VF7 1730 aa8.63□□□□□ -1.03
RIF1-210ENST00000484077 SBNO1A3KN83 1393 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 GSTP1P09211 210 aaKnown RBP8.62□□□□□ -1.03
RIF1-210ENST00000484077 SLFN14P0C7P3 912 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 DRD2P14416 443 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 RXRBP28702 533 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 GRIK1P39086 918 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 MAP7Q14244 749 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 PMFBP1Q8TBY8 1022 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 CARD11Q9BXL7 1154 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 FAM8A1Q9UBU6 413 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 AKAP2Q9Y2D5 859 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 SAMM50Q9Y512 469 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 USP54Q70EL1 1684 aa8.62□□□□□ -1.03
RIF1-210ENST00000484077 ARHGEF10O15013 1369 aa8.61□□□□□ -1.03
RIF1-210ENST00000484077 HYAL3O43820 417 aaPredicted RBP8.61□□□□□ -1.03
RIF1-210ENST00000484077 COBLO75128 1261 aa8.61□□□□□ -1.03
RIF1-210ENST00000484077 LDHBP07195 334 aaKnown RBP8.61□□□□□ -1.03
RIF1-210ENST00000484077 P4HBP07237 508 aaKnown RBP8.61□□□□□ -1.03
RIF1-210ENST00000484077 NME2P22392 152 aa8.61□□□□□ -1.03
RIF1-210ENST00000484077 SCARA3Q6AZY7 606 aa8.61□□□□□ -1.03
RIF1-210ENST00000484077 WDR18Q9BV38 432 aa8.61□□□□□ -1.03
RIF1-210ENST00000484077 C12orf49Q9H741 205 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms