RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 KIAA2012Q0VF49 1180 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 PKP1Q13835 747 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 PPP2R5BQ15173 497 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 SBK1Q52WX2 424 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 PRAMEF18Q5VWM3 479 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 LARP1BQ659C4 914 aaKnown RBP6.35□□□□□ -1.39
COL17A1-206ENST00000483876 MFSD6Q6ZSS7 791 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 TXNRD3Q86VQ6 643 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 SGMS1Q86VZ5 419 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 CCDC83Q8IWF9 413 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 SLF2Q8IX21 1173 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 TBC1D16Q8TBP0 767 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 IGDCC4Q8TDY8 1250 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 STAG1Q8WVM7 1258 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 NBPF3Q9H094 633 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 EPHX3Q9H6B9 360 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 ARMT1Q9H993 441 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.35□□□□□ -1.39
COL17A1-206ENST00000483876 COL4A1P02462 1669 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 PRC1O43663 620 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 LARGE1O95461 756 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 TFRCP02786 760 aaKnown RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 LDHBP07195 334 aaKnown RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 PLCG2P16885 1265 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 KLRK1P26718 216 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 ANTXR2P58335 489 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 MRPS5P82675 430 aaKnown RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 NHLH1Q02575 133 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 ST3GAL1Q11201 340 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 PRKG1Q13976 671 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 KIF22Q14807 665 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 CSPP1Q1MSJ5 1256 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 KLHL40Q2TBA0 621 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 ATL3Q6DD88 541 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 NOL8Q76FK4 1167 aaKnown RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 ARMC9Q7Z3E5 817 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 ADGRA1Q86SQ6 560 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 LCORLQ8N3X6 602 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 NECAB1Q8N987 351 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 TMEM87AQ8NBN3 555 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 ZNF384Q8TF68 577 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 PAWRQ96IZ0 340 aaKnown RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 RTFDC1Q9BY42 306 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 CRNKL1Q9BZJ0 848 aaKnown RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 ZSCAN16Q9H4T2 348 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 LMBRD1Q9NUN5 540 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 ZSWIM5Q9P217 1185 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 THEGQ9P2T0 379 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 BIN2Q9UBW5 565 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 POLLQ9UGP5 575 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 TAOK2Q9UL54 1235 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 ANGEL1Q9UNK9 670 aaKnown RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 SCAF8Q9UPN6 1271 aaKnown RBP6.34□□□□□ -1.39
COL17A1-206ENST00000483876 MTMR6Q9Y217 621 aa6.34□□□□□ -1.39
COL17A1-206ENST00000483876 GPR75-ASB3A0A0A6YYF3 556 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 SH2B2O14492 632 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 PRKAB2O43741 272 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 ORC4O43929 436 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 GPR37L1O60883 481 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 KRT37O76014 449 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 CDKL5O76039 1030 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 UFL1O94874 794 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 MBD3O95983 291 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 F13A1P00488 732 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 GNRH1P01148 92 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 SLC3A2P08195 630 aaKnown RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 ZBTB48P10074 688 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 GRK4P32298 578 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 TDO2P48775 406 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 PRMT2P55345 433 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 HAND2P61296 217 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 UBXN2AP68543 259 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 PPARAQ07869 468 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 SCRN1Q12765 414 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 COL9A3Q14050 684 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 SART3Q15020 963 aaKnown RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 CCDC178Q5BJE1 867 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 DPP8Q6V1X1 898 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 PODNQ7Z5L7 613 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 NECAB2Q7Z6G3 386 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 TBC1D10CQ8IV04 446 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 NSUN7Q8NE18 718 aaKnown RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 ESR2Q92731 530 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 SLC10A4Q96EP9 437 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 TCEANC2Q96MN5 208 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 NECAB3Q96P71 396 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 EYA3Q99504 573 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 LARP6Q9BRS8 491 aaKnown RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 EPB41L4AQ9HCS5 686 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 IQSEC3Q9UPP2 1182 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 A0A1B0GUL6 1792 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 COL1A1P02452 1464 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 COL2A1P02458 1487 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-206ENST00000483876 MUC6Q6W4X9 2439 aa6.33□□□□□ -1.4
COL17A1-206ENST00000483876 TAF1P21675 1872 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 PKD1L2Q7Z442 2459 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 CCDC196A0A1B0GTZ2 297 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 C6orf229H3BNL8 230 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 PRPF40AO75400 957 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms