RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 RASA1P20936 1047 aa31.58■■■□□ 2.65
GTF3C4-202ENST00000483873 ALX1Q15699 326 aa31.58■■■□□ 2.65
GTF3C4-202ENST00000483873 CCDC17Q96LX7 622 aa31.58■■■□□ 2.65
GTF3C4-202ENST00000483873 PRDM1O75626 825 aa31.58■■■□□ 2.65
GTF3C4-202ENST00000483873 FGAP02671 866 aa31.58■■■□□ 2.65
GTF3C4-202ENST00000483873 CYP2C8P10632 490 aa31.58■■■□□ 2.65
GTF3C4-202ENST00000483873 ZYXQ15942 572 aaKnown RBP31.58■■■□□ 2.65
GTF3C4-202ENST00000483873 MKNK2Q9HBH9 465 aa31.58■■■□□ 2.65
GTF3C4-202ENST00000483873 LAMA4Q16363 1823 aa31.57■■■□□ 2.64
GTF3C4-202ENST00000483873 ZSWIM8A7E2V4 1837 aa31.57■■■□□ 2.64
GTF3C4-202ENST00000483873 FKTNO75072 461 aa31.57■■■□□ 2.64
GTF3C4-202ENST00000483873 MFAP1P55081 439 aaKnown RBP31.57■■■□□ 2.64
GTF3C4-202ENST00000483873 CTDSPL2Q05D32 466 aa31.57■■■□□ 2.64
GTF3C4-202ENST00000483873 FEZ1Q99689 392 aa31.57■■■□□ 2.64
GTF3C4-202ENST00000483873 ADGRA2Q96PE1 1338 aa31.56■■■□□ 2.64
GTF3C4-202ENST00000483873 C19orf81C9J6K1 198 aa31.56■■■□□ 2.64
GTF3C4-202ENST00000483873 TLR2O60603 784 aa31.56■■■□□ 2.64
GTF3C4-202ENST00000483873 CHMLP26374 656 aa31.56■■■□□ 2.64
GTF3C4-202ENST00000483873 EMILIN3Q9NT22 766 aa31.56■■■□□ 2.64
GTF3C4-202ENST00000483873 A0A1W2PRG0 241 aa31.55■■■□□ 2.64
GTF3C4-202ENST00000483873 PARK7Q99497 189 aaKnown RBP31.55■■■□□ 2.64
GTF3C4-202ENST00000483873 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.55■■■□□ 2.64
GTF3C4-202ENST00000483873 TMOD4Q9NZQ9 345 aa31.55■■■□□ 2.64
GTF3C4-202ENST00000483873 SLC45A1Q9Y2W3 748 aa31.55■■■□□ 2.64
GTF3C4-202ENST00000483873 TACC3Q9Y6A5 838 aa31.55■■■□□ 2.64
GTF3C4-202ENST00000483873 USP17L2Q6R6M4 530 aa31.54■■■□□ 2.64
GTF3C4-202ENST00000483873 ZMYM6O95789 1325 aa31.54■■■□□ 2.64
GTF3C4-202ENST00000483873 ICA1Q05084 483 aa31.53■■■□□ 2.64
GTF3C4-202ENST00000483873 SIAH1Q8IUQ4 282 aa31.53■■■□□ 2.64
GTF3C4-202ENST00000483873 KIAA1683Q9H0B3 1180 aa31.53■■■□□ 2.64
GTF3C4-202ENST00000483873 INCENPQ9NQS7 918 aa31.53■■■□□ 2.64
GTF3C4-202ENST00000483873 CPA4Q9UI42 421 aa31.53■■■□□ 2.64
GTF3C4-202ENST00000483873 ANAPC4Q9UJX5 808 aa31.52■■■□□ 2.64
GTF3C4-202ENST00000483873 GTF3C3Q9Y5Q9 886 aa31.52■■■□□ 2.64
GTF3C4-202ENST00000483873 MYH4Q9Y623 1939 aa31.52■■■□□ 2.64
GTF3C4-202ENST00000483873 SLC3A2P08195 630 aaKnown RBP31.51■■■□□ 2.64
GTF3C4-202ENST00000483873 SP3Q02447 781 aa31.51■■■□□ 2.64
GTF3C4-202ENST00000483873 PDE4BQ07343 736 aa31.51■■■□□ 2.64
GTF3C4-202ENST00000483873 C17orf99Q6UX52 265 aa31.51■■■□□ 2.64
GTF3C4-202ENST00000483873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.51■■■□□ 2.64
GTF3C4-202ENST00000483873 HAND2P61296 217 aa31.5■■■□□ 2.63
GTF3C4-202ENST00000483873 CAP1Q01518 475 aa31.5■■■□□ 2.63
GTF3C4-202ENST00000483873 ZNF444Q8N0Y2 327 aaPredicted RBP31.5■■■□□ 2.63
GTF3C4-202ENST00000483873 CD99L2Q8TCZ2 262 aa31.5■■■□□ 2.63
GTF3C4-202ENST00000483873 C12orf42Q96LP6 360 aa31.5■■■□□ 2.63
GTF3C4-202ENST00000483873 ZNF287Q9HBT7 754 aa31.5■■■□□ 2.63
GTF3C4-202ENST00000483873 ASCC2Q9H1I8 757 aaPredicted RBP31.49■■■□□ 2.63
GTF3C4-202ENST00000483873 RAD50Q92878 1312 aa31.49■■■□□ 2.63
GTF3C4-202ENST00000483873 EEF2P13639 858 aaKnown RBP31.49■■■□□ 2.63
GTF3C4-202ENST00000483873 USP14P54578 494 aa31.49■■■□□ 2.63
GTF3C4-202ENST00000483873 BMP2KLQ5H9B9 411 aa31.49■■■□□ 2.63
GTF3C4-202ENST00000483873 DSCC1Q9BVC3 393 aa31.49■■■□□ 2.63
GTF3C4-202ENST00000483873 ATP2B2Q01814 1243 aa31.48■■■□□ 2.63
GTF3C4-202ENST00000483873 PABPC4Q13310 644 aaKnown RBP eCLIP31.48■■■□□ 2.63
GTF3C4-202ENST00000483873 FAM47AQ5JRC9 791 aa31.48■■■□□ 2.63
GTF3C4-202ENST00000483873 NBPF3Q9H094 633 aa31.48■■■□□ 2.63
GTF3C4-202ENST00000483873 KANSL2Q9H9L4 492 aa31.48■■■□□ 2.63
GTF3C4-202ENST00000483873 ARHGEF10LQ9HCE6 1279 aa31.48■■■□□ 2.63
GTF3C4-202ENST00000483873 PNMA3Q9UL41 463 aa31.48■■■□□ 2.63
GTF3C4-202ENST00000483873 VCAM1P19320 739 aa31.47■■■□□ 2.63
GTF3C4-202ENST00000483873 KIAA1755Q5JYT7 1200 aa31.47■■■□□ 2.63
GTF3C4-202ENST00000483873 CTU1Q7Z7A3 348 aaKnown RBP31.47■■■□□ 2.63
GTF3C4-202ENST00000483873 SMCR8Q8TEV9 937 aaPredicted RBP31.47■■■□□ 2.63
GTF3C4-202ENST00000483873 RUFY2Q8WXA3 655 aa31.47■■■□□ 2.63
GTF3C4-202ENST00000483873 MGAMO43451 1857 aa31.47■■■□□ 2.63
GTF3C4-202ENST00000483873 IGKV6D-41A0A0C4DH26 115 aa31.46■■■□□ 2.63
GTF3C4-202ENST00000483873 BCRP11274 1271 aa31.46■■■□□ 2.63
GTF3C4-202ENST00000483873 OSBPP22059 807 aa31.46■■■□□ 2.63
GTF3C4-202ENST00000483873 HOXA7P31268 230 aaPredicted RBP31.46■■■□□ 2.63
GTF3C4-202ENST00000483873 ERO1AQ96HE7 468 aa31.46■■■□□ 2.63
GTF3C4-202ENST00000483873 TMX2Q9Y320 296 aa31.46■■■□□ 2.63
GTF3C4-202ENST00000483873 PLIN4Q96Q06 1357 aa31.45■■■□□ 2.63
GTF3C4-202ENST00000483873 SGSM2O43147 1006 aa31.45■■■□□ 2.63
GTF3C4-202ENST00000483873 ECM2O94769 699 aaPredicted RBP31.45■■■□□ 2.63
GTF3C4-202ENST00000483873 MCOLN1Q9GZU1 580 aa31.45■■■□□ 2.63
GTF3C4-202ENST00000483873 TSPY3P0CV98 308 aa31.44■■■□□ 2.62
GTF3C4-202ENST00000483873 TSPY8P0CW00 308 aa31.44■■■□□ 2.62
GTF3C4-202ENST00000483873 IRX3P78415 501 aaPredicted RBP31.44■■■□□ 2.62
GTF3C4-202ENST00000483873 TFAP4Q01664 338 aa31.44■■■□□ 2.62
GTF3C4-202ENST00000483873 TBC1D10CQ8IV04 446 aa31.44■■■□□ 2.62
GTF3C4-202ENST00000483873 ARHGAP39Q9C0H5 1083 aa31.44■■■□□ 2.62
GTF3C4-202ENST00000483873 FGRP09769 529 aa31.43■■■□□ 2.62
GTF3C4-202ENST00000483873 NEDD1Q8NHV4 660 aa31.43■■■□□ 2.62
GTF3C4-202ENST00000483873 CEP95Q96GE4 821 aa31.43■■■□□ 2.62
GTF3C4-202ENST00000483873 P2RX7Q99572 595 aaKnown RBP31.43■■■□□ 2.62
GTF3C4-202ENST00000483873 PARP14Q460N5 1801 aa31.43■■■□□ 2.62
GTF3C4-202ENST00000483873 ORC4O43929 436 aa31.42■■■□□ 2.62
GTF3C4-202ENST00000483873 LACTBP83111 547 aaPredicted RBP31.42■■■□□ 2.62
GTF3C4-202ENST00000483873 PTH1RQ03431 593 aa31.42■■■□□ 2.62
GTF3C4-202ENST00000483873 RPAP3Q9H6T3 665 aaPredicted RBP31.42■■■□□ 2.62
GTF3C4-202ENST00000483873 SH2D4AQ9H788 454 aa31.42■■■□□ 2.62
GTF3C4-202ENST00000483873 VCPKMTQ9H867 229 aa31.42■■■□□ 2.62
GTF3C4-202ENST00000483873 RLFQ13129 1914 aa31.42■■■□□ 2.62
GTF3C4-202ENST00000483873 OTOP1Q7RTM1 612 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 SPICE1Q8N0Z3 855 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 ANKRD13CQ8N6S4 541 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 TOMM22Q9NS69 142 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 NYAP2Q9P242 653 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 TRIM17Q9Y577 477 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 TSPY2A6NKD2 308 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms