RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
HDAC6-226ENST00000483656 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
HDAC6-226ENST00000483656 DDAH1O94760 285 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 DDNO94850 711 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-226ENST00000483656 ZSCAN22P10073 491 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-226ENST00000483656 IFNAR1P17181 557 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 EPS15P42566 896 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 JAG1P78504 1218 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 FUT2Q10981 343 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 KIF4BQ2VIQ3 1234 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 NBPF11Q86T75 865 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 CRACR2BQ8N4Y2 399 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-226ENST00000483656 TRPM4Q8TD43 1214 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 PHKBQ93100 1093 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 CSRNP1Q96S65 589 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 MTMR4Q9NYA4 1195 aa11.79□□□□□ -0.52
HDAC6-226ENST00000483656 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-226ENST00000483656 SCAF8Q9UPN6 1271 aaKnown RBP11.79□□□□□ -0.52
HDAC6-226ENST00000483656 GREB1LQ9C091 1923 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-226ENST00000483656 UBE2Q2LH0YL09 131 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 H7C1D1 291 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 CPLX1O14810 134 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 MYO1BO43795 1136 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 BAG4O95429 457 aaKnown RBP11.78□□□□□ -0.52
HDAC6-226ENST00000483656 GUCY1A2P33402 732 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 HIRAP54198 1017 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-226ENST00000483656 CDC37L1Q7L3B6 337 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 CLEC10AQ8IUN9 316 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 CMTR1Q8N1G2 835 aaKnown RBP11.78□□□□□ -0.52
HDAC6-226ENST00000483656 PNMA1Q8ND90 353 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 CCDC17Q96LX7 622 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 TEPSINQ96N21 525 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 KAT14Q9H8E8 782 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 HACL1Q9UJ83 578 aa11.78□□□□□ -0.52
HDAC6-226ENST00000483656 PLEKHA8P1O95397 391 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-226ENST00000483656 F13A1P00488 732 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 CALM1P0DP23 149 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 CALM2P0DP24 149 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 CALM3P0DP25 149 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 TOP1P11387 765 aaKnown RBP11.77□□□□□ -0.53
HDAC6-226ENST00000483656 PDCP20941 246 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 MCM4P33991 863 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 MAP3K10Q02779 954 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 RASA3Q14644 834 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 GRM4Q14833 912 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 PPP2R5BQ15173 497 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 GPR162Q16538 588 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 SLC35G1Q2M3R5 365 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 CERKLQ49MI3 558 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-226ENST00000483656 TMTC3Q6ZXV5 915 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 SIAH1Q8IUQ4 282 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 SRBD1Q8N5C6 995 aaKnown RBP11.77□□□□□ -0.53
HDAC6-226ENST00000483656 FAM184AQ8NB25 1140 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 MAP3K14Q99558 947 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 HERC5Q9UII4 1024 aaKnown RBP11.77□□□□□ -0.53
HDAC6-226ENST00000483656 STX8Q9UNK0 236 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 STK36Q9NRP7 1315 aa11.77□□□□□ -0.53
HDAC6-226ENST00000483656 CCDC196A0A1B0GTZ2 297 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 VPS37CA5D8V6 355 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-226ENST00000483656 TBC1D12O60347 775 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 CDKL5O76039 1030 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 GDF11O95390 407 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 TNNI2P48788 182 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 FOSBP53539 338 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 SSRP1Q08945 709 aaKnown RBP11.76□□□□□ -0.53
HDAC6-226ENST00000483656 OTUD7BQ6GQQ9 843 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 CPLX2Q6PUV4 134 aaKnown RBP11.76□□□□□ -0.53
HDAC6-226ENST00000483656 RASGRP2Q7LDG7 609 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 SLC26A6Q9BXS9 759 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
HDAC6-226ENST00000483656 GJB4Q9NTQ9 266 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 RBM28Q9NW13 759 aaKnown RBP11.76□□□□□ -0.53
HDAC6-226ENST00000483656 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 MYH8P13535 1937 aa11.76□□□□□ -0.53
HDAC6-226ENST00000483656 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-226ENST00000483656 MPHOSPH10O00566 681 aaKnown RBP11.75□□□□□ -0.53
HDAC6-226ENST00000483656 PDIA4P13667 645 aaKnown RBP11.75□□□□□ -0.53
HDAC6-226ENST00000483656 GUCY1B3Q02153 619 aa11.75□□□□□ -0.53
HDAC6-226ENST00000483656 RESTQ13127 1097 aa11.75□□□□□ -0.53
HDAC6-226ENST00000483656 SEPT2Q15019 361 aa11.75□□□□□ -0.53
HDAC6-226ENST00000483656 ABCB5Q2M3G0 1257 aa11.75□□□□□ -0.53
HDAC6-226ENST00000483656 ANGEL2Q5VTE6 544 aaKnown RBP11.75□□□□□ -0.53
HDAC6-226ENST00000483656 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
HDAC6-226ENST00000483656 CTCFLQ8NI51 663 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-226ENST00000483656 MKL1Q969V6 931 aa11.75□□□□□ -0.53
HDAC6-226ENST00000483656 TRIM34Q9BYJ4 488 aa11.75□□□□□ -0.53
HDAC6-226ENST00000483656 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
HDAC6-226ENST00000483656 PRPF3O43395 683 aaKnown RBP11.74□□□□□ -0.53
HDAC6-226ENST00000483656 GRIN3BO60391 1043 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 TTLL1O95922 423 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 GH2P01242 217 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 PKN1Q16512 942 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 TMEM179Q6ZVK1 233 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms