RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 USP17L20D6RJB6 530 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 ELNP15502 786 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 USP17L24Q0WX57 530 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 GPATCH3Q96I76 525 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 BCL11AQ9H165 835 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 ARMT1Q9H993 441 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 CEP290O15078 2479 aa23.93■■□□□ 1.42
HPS4-213ENST00000483631 MBD4O95243 580 aa23.93■■□□□ 1.42
HPS4-213ENST00000483631 MAPK4P31152 587 aa23.93■■□□□ 1.42
HPS4-213ENST00000483631 LBX2Q6XYB7 198 aa23.93■■□□□ 1.42
HPS4-213ENST00000483631 UBE2Q1Q7Z7E8 422 aa23.93■■□□□ 1.42
HPS4-213ENST00000483631 U2AF1L4Q8WU68 220 aaKnown RBP23.93■■□□□ 1.42
HPS4-213ENST00000483631 SOCS4Q8WXH5 440 aa23.93■■□□□ 1.42
HPS4-213ENST00000483631 UNC93B1Q9H1C4 597 aa23.93■■□□□ 1.42
HPS4-213ENST00000483631 RBPJLQ9UBG7 517 aa23.93■■□□□ 1.42
HPS4-213ENST00000483631 SMARCA5O60264 1052 aaPredicted RBP23.92■■□□□ 1.42
HPS4-213ENST00000483631 SGPL1O95470 568 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 HMGCRP04035 888 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 GUCY1A2P33402 732 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 ERVK-9P63128 1117 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 ERVK-24P63145 666 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 CATSPERGQ6ZRH7 1159 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 AMOTL1Q8IY63 956 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 DDRGK1Q96HY6 314 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 TXNRD2Q9NNW7 524 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 PAK6Q9NQU5 681 aaPredicted RBP23.92■■□□□ 1.42
HPS4-213ENST00000483631 RABGAP1Q9Y3P9 1069 aa23.92■■□□□ 1.42
HPS4-213ENST00000483631 XRCC5P13010 732 aaKnown RBP23.91■■□□□ 1.42
HPS4-213ENST00000483631 VCAM1P19320 739 aa23.91■■□□□ 1.42
HPS4-213ENST00000483631 TMEM179Q6ZVK1 233 aa23.91■■□□□ 1.42
HPS4-213ENST00000483631 TRMT44Q8IYL2 757 aaKnown RBP23.9■■□□□ 1.42
HPS4-213ENST00000483631 ACER1Q8TDN7 264 aa23.9■■□□□ 1.42
HPS4-213ENST00000483631 CCDC17Q96LX7 622 aa23.9■■□□□ 1.42
HPS4-213ENST00000483631 NUDT12Q9BQG2 462 aa23.9■■□□□ 1.42
HPS4-213ENST00000483631 CCNA1P78396 465 aa23.89■■□□□ 1.41
HPS4-213ENST00000483631 SEPT2Q15019 361 aa23.89■■□□□ 1.41
HPS4-213ENST00000483631 C12orf60Q5U649 245 aa23.89■■□□□ 1.41
HPS4-213ENST00000483631 KBTBD3Q8NAB2 608 aa23.89■■□□□ 1.41
HPS4-213ENST00000483631 PRKAB2O43741 272 aa23.88■■□□□ 1.41
HPS4-213ENST00000483631 ZYXQ15942 572 aaKnown RBP23.88■■□□□ 1.41
HPS4-213ENST00000483631 Q3C1V9 767 aa23.88■■□□□ 1.41
HPS4-213ENST00000483631 HTATIP2Q9BUP3 242 aa23.88■■□□□ 1.41
HPS4-213ENST00000483631 RPTORQ8N122 1335 aa23.87■■□□□ 1.41
HPS4-213ENST00000483631 MPHOSPH10O00566 681 aaKnown RBP23.87■■□□□ 1.41
HPS4-213ENST00000483631 CYP2D6P10635 497 aa23.87■■□□□ 1.41
HPS4-213ENST00000483631 SLFNL1Q499Z3 407 aa23.87■■□□□ 1.41
HPS4-213ENST00000483631 POTEEQ6S8J3 1075 aa23.87■■□□□ 1.41
HPS4-213ENST00000483631 CCAR1Q8IX12 1150 aaKnown RBP23.87■■□□□ 1.41
HPS4-213ENST00000483631 USP6NLQ92738 828 aa23.87■■□□□ 1.41
HPS4-213ENST00000483631 CRISPLD2Q9H0B8 497 aa23.87■■□□□ 1.41
HPS4-213ENST00000483631 PUS7LQ9H0K6 701 aaKnown RBP23.87■■□□□ 1.41
HPS4-213ENST00000483631 SLC4A4Q9Y6R1 1079 aa23.87■■□□□ 1.41
HPS4-213ENST00000483631 TTC41PQ6P2S7 1318 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 USP17L12C9JPN9 530 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 USP17L21D6R901 530 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 FARP2O94887 1054 aaPredicted RBP23.86■■□□□ 1.41
HPS4-213ENST00000483631 ZFYP08048 801 aaPredicted RBP23.86■■□□□ 1.41
HPS4-213ENST00000483631 EVX2Q03828 476 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 GIMAP6Q6P9H5 292 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 C16orf86Q6ZW13 317 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 GPR142Q7Z601 462 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 LPAR1Q92633 364 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 DEFB118Q96PH6 123 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 PAGR1Q9BTK6 254 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.86■■□□□ 1.41
HPS4-213ENST00000483631 SH2D4AQ9H788 454 aa23.86■■□□□ 1.41
HPS4-213ENST00000483631 ARPP21Q9UBL0 812 aaPredicted RBP23.86■■□□□ 1.41
HPS4-213ENST00000483631 GLRX3O76003 335 aaKnown RBP23.85■■□□□ 1.41
HPS4-213ENST00000483631 RRP1P56182 461 aaKnown RBP23.85■■□□□ 1.41
HPS4-213ENST00000483631 LRRFIP1Q32MZ4 808 aaKnown RBP23.85■■□□□ 1.41
HPS4-213ENST00000483631 MORN1Q5T089 497 aa23.85■■□□□ 1.41
HPS4-213ENST00000483631 PLEKHH3Q7Z736 793 aa23.85■■□□□ 1.41
HPS4-213ENST00000483631 SLC44A5Q8NCS7 719 aa23.85■■□□□ 1.41
HPS4-213ENST00000483631 DYNLL2Q96FJ2 89 aa23.85■■□□□ 1.41
HPS4-213ENST00000483631 PORCNQ9H237 461 aa23.85■■□□□ 1.41
HPS4-213ENST00000483631 RPAP3Q9H6T3 665 aaPredicted RBP23.85■■□□□ 1.41
HPS4-213ENST00000483631 ARHGEF10LQ9HCE6 1279 aa23.85■■□□□ 1.41
HPS4-213ENST00000483631 HMX1Q9NP08 348 aaPredicted RBP23.85■■□□□ 1.41
HPS4-213ENST00000483631 PCDHB15Q9Y5E8 787 aa23.85■■□□□ 1.41
HPS4-213ENST00000483631 A0A1W2PRG0 241 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 CNMDO75829 334 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 RGS2P41220 211 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 CDK8P49336 464 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 MAP3K21Q5TCX8 1036 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 ANKLE1Q8NAG6 615 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 TRIB2Q92519 343 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 APPBP2Q92624 585 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 STRBPQ96SI9 672 aaKnown RBP23.84■■□□□ 1.41
HPS4-213ENST00000483631 HOXC10Q9NYD6 342 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 RLFQ13129 1914 aa23.84■■□□□ 1.41
HPS4-213ENST00000483631 SPDYE16A6NNV3 312 aaPredicted RBP23.83■■□□□ 1.41
HPS4-213ENST00000483631 ERC2O15083 957 aa23.83■■□□□ 1.41
HPS4-213ENST00000483631 PEX10O60683 326 aa23.83■■□□□ 1.41
HPS4-213ENST00000483631 TFRCP02786 760 aaKnown RBP23.83■■□□□ 1.41
HPS4-213ENST00000483631 CHGBP05060 677 aa23.83■■□□□ 1.41
HPS4-213ENST00000483631 CYP2B6P20813 491 aa23.83■■□□□ 1.41
HPS4-213ENST00000483631 COG2Q14746 738 aa23.83■■□□□ 1.41
HPS4-213ENST00000483631 SBK1Q52WX2 424 aa23.83■■□□□ 1.41
HPS4-213ENST00000483631 CTR9Q6PD62 1173 aa23.83■■□□□ 1.41
HPS4-213ENST00000483631 TMX2Q9Y320 296 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms