RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 COL9A3Q14050 684 aaPredicted RBP8.77□□□□□ -1.01
COL4A5-205ENST00000483338 CCDC57Q2TAC2 916 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 ATL3Q6DD88 541 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 KCNN1Q92952 543 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 CNKSR1Q969H4 720 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 MEIS3Q99687 375 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 PHF24Q9UPV7 400 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 MYH15Q9Y2K3 1946 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 GPR75-ASB3A0A0A6YYF3 556 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 SOWAHDA6NJG2 315 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 CBFA2T2O43439 604 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 FAM107AO95990 144 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 ABL1P00519 1130 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 EPB41P11171 864 aaKnown RBP8.77□□□□□ -1.01
COL4A5-205ENST00000483338 FBLN1P23142 703 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 GJA8P48165 433 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 FSIP1Q8NA03 581 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 RRP36Q96EU6 259 aaKnown RBP8.77□□□□□ -1.01
COL4A5-205ENST00000483338 SDF4Q9BRK5 362 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 ZSWIM6Q9HCJ5 1215 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 SPATA7Q9P0W8 599 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 CFAP45Q9UL16 551 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 ASB3Q9Y575 518 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 ADGRG1Q9Y653 693 aa8.77□□□□□ -1.01
COL4A5-205ENST00000483338 GOLGA6L10A6NI86 522 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 PPP1R37O75864 691 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 NBPF7P0C2Y1 421 aaPredicted RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 MCM3P25205 808 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 RPL13P26373 211 aaKnown RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 PABPC1LQ4VXU2 614 aaKnown RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 HIBCHQ6NVY1 386 aaPredicted RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 CCNI2Q6ZMN8 369 aaPredicted RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 ARHGEF25Q86VW2 580 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 ELOA2Q8IYF1 753 aaPredicted RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 SLC35B4Q969S0 331 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 RCOR1Q9UKL0 485 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 NUB1Q9Y5A7 615 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 CYP46A1Q9Y6A2 500 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 MAP3K5Q99683 1374 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 IKBKBO14920 756 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 CREB3O43889 395 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 TUBP50607 506 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 AMPD2Q01433 879 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 Q4G0T1 1027 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 SLC4A10Q6U841 1118 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 FMR1NBQ8N0W7 255 aaPredicted RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 AGAP11Q8TF27 550 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 CYFIP2Q96F07 1278 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 NAPGQ99747 312 aaPredicted RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 AATFQ9NY61 560 aaKnown RBP eCLIP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 NOP53Q9NZM5 478 aaKnown RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 SPG7Q9UQ90 795 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 CHD2O14647 1828 aaKnown RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 A2ML1A8K2U0 1454 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 ATP2C2O75185 946 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 DNAJC8O75937 253 aaPredicted RBP8.76□□□□□ -1.01
COL4A5-205ENST00000483338 KCTD16Q68DU8 428 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 DPY19L2Q6NUT2 758 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 MIPOL1Q8TD10 442 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 PREBQ9HCU5 417 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 NSD2O96028 1365 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 SIGLEC1Q9BZZ2 1709 aa8.76□□□□□ -1.01
COL4A5-205ENST00000483338 MBD4O95243 580 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 NLRP12P59046 1061 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 APBA1Q02410 837 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 LACTB2Q53H82 288 aaPredicted RBP8.75□□□□□ -1.01
COL4A5-205ENST00000483338 MSL1Q68DK7 614 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 RAD9BQ6WBX8 426 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 KDM7AQ6ZMT4 941 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 AENQ8WTP8 325 aaKnown RBP8.75□□□□□ -1.01
COL4A5-205ENST00000483338 DTNBP1Q96EV8 351 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 ZWILCHQ9H900 591 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 GALNT8Q9NY28 637 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 TMOD4Q9NZQ9 345 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 TBX22Q9Y458 520 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 FER1L4A9Z1Z3 1794 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 TARSL2A2RTX5 802 aaKnown RBP8.75□□□□□ -1.01
COL4A5-205ENST00000483338 RASSF10A6NK89 507 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 N4BP3O15049 544 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 FAM114A1Q8IWE2 563 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 SDR16C5Q8N3Y7 309 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 SPHKAPQ2M3C7 1700 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 E7EVH7 732 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 STXBP3O00186 592 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 ALDH3A1P30838 453 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 MXRA7P84157 204 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 STAP2Q9UGK3 403 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 TMEM98Q9Y2Y6 226 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 PREX1Q8TCU6 1659 aa8.75□□□□□ -1.01
COL4A5-205ENST00000483338 PARP1P09874 1014 aaKnown RBP8.74□□□□□ -1.01
COL4A5-205ENST00000483338 KCNA6P17658 529 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 CNGA1P29973 690 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 RIPK1Q13546 671 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 POLA2Q14181 598 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 PPP1R7Q15435 360 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 TWISTNBQ3B726 338 aaPredicted RBP8.74□□□□□ -1.01
COL4A5-205ENST00000483338 SND1Q7KZF4 910 aaKnown RBP eCLIP8.74□□□□□ -1.012e-6■■■□□ 17.5
COL4A5-205ENST00000483338 MMS19Q96T76 1030 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 HINFPQ9BQA5 517 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 UNC45AQ9H3U1 944 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms