RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 CYP8B1Q9UNU6 501 aa6.26□□□□□ -1.41
COPA-204ENST00000481522 IGF2BP3O00425 579 aaKnown RBP eCLIP6.25□□□□□ -1.41
COPA-204ENST00000481522 INSRRP14616 1297 aa6.25□□□□□ -1.41
COPA-204ENST00000481522 TAGLNQ01995 201 aaKnown RBP6.25□□□□□ -1.41
COPA-204ENST00000481522 PUM1Q14671 1186 aaKnown RBP eCLIP6.25□□□□□ -1.41
COPA-204ENST00000481522 MEI1Q5TIA1 1274 aa6.25□□□□□ -1.41
COPA-204ENST00000481522 TTBK2Q6IQ55 1244 aa6.25□□□□□ -1.41
COPA-204ENST00000481522 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.25□□□□□ -1.41
COPA-204ENST00000481522 MARCH10Q8NA82 808 aaPredicted RBP6.25□□□□□ -1.41
COPA-204ENST00000481522 PICK1Q9NRD5 415 aa6.25□□□□□ -1.41
COPA-204ENST00000481522 BMP6P22004 513 aa6.24□□□□□ -1.41
COPA-204ENST00000481522 ST13P50502 369 aaKnown RBP6.24□□□□□ -1.41
COPA-204ENST00000481522 EFEMP1Q12805 493 aa6.24□□□□□ -1.41
COPA-204ENST00000481522 TAF1CQ15572 869 aaPredicted RBP6.24□□□□□ -1.41
COPA-204ENST00000481522 SCARA3Q6AZY7 606 aa6.24□□□□□ -1.41
COPA-204ENST00000481522 GRIN3AQ8TCU5 1115 aa6.24□□□□□ -1.41
COPA-204ENST00000481522 ISL2Q96A47 359 aa6.24□□□□□ -1.41
COPA-204ENST00000481522 ARAP1Q96P48 1450 aa6.23□□□□□ -1.41
COPA-204ENST00000481522 NEFMP07197 916 aa6.23□□□□□ -1.41
COPA-204ENST00000481522 RLBP1P12271 317 aa6.23□□□□□ -1.41
COPA-204ENST00000481522 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
COPA-204ENST00000481522 FAM214BQ7L5A3 538 aa6.23□□□□□ -1.41
COPA-204ENST00000481522 RGS22Q8NE09 1264 aa6.23□□□□□ -1.41
COPA-204ENST00000481522 XYLT2Q9H1B5 865 aa6.23□□□□□ -1.41
COPA-204ENST00000481522 PCDHA4Q9UN74 947 aa6.23□□□□□ -1.41
COPA-204ENST00000481522 RB1CC1Q8TDY2 1594 aa6.23□□□□□ -1.41
COPA-204ENST00000481522 TRIM13O60858 407 aa6.22□□□□□ -1.41
COPA-204ENST00000481522 LIG3P49916 1009 aa6.22□□□□□ -1.41
COPA-204ENST00000481522 CLCN7P51798 805 aa6.22□□□□□ -1.41
COPA-204ENST00000481522 RPS26P62854 115 aaKnown RBP6.22□□□□□ -1.41
COPA-204ENST00000481522 ERVK-24P63145 666 aa6.22□□□□□ -1.41
COPA-204ENST00000481522 NKPD1Q17RQ9 610 aa6.22□□□□□ -1.41
COPA-204ENST00000481522 RASIP1Q5U651 963 aa6.22□□□□□ -1.41
COPA-204ENST00000481522 DIEXFQ68CQ4 756 aaKnown RBP6.22□□□□□ -1.41
COPA-204ENST00000481522 RNF214Q8ND24 703 aa6.22□□□□□ -1.41
COPA-204ENST00000481522 ELMO3Q96BJ8 720 aa6.22□□□□□ -1.41
COPA-204ENST00000481522 NOC4LQ9BVI4 516 aaKnown RBP6.22□□□□□ -1.41
COPA-204ENST00000481522 CTSHP09668 335 aa6.21□□□□□ -1.42
COPA-204ENST00000481522 ZNF16P17020 682 aaPredicted RBP6.21□□□□□ -1.42
COPA-204ENST00000481522 GDNFP39905 211 aa6.21□□□□□ -1.42
COPA-204ENST00000481522 ZC3H12AQ5D1E8 599 aaKnown RBP6.21□□□□□ -1.42
COPA-204ENST00000481522 MPRIPQ6WCQ1 1025 aa6.21□□□□□ -1.42
COPA-204ENST00000481522 PRDM10Q9NQV6 1147 aa6.21□□□□□ -1.42
COPA-204ENST00000481522 CACNA2D2Q9NY47 1150 aa6.21□□□□□ -1.42
COPA-204ENST00000481522 THOC2Q8NI27 1593 aaKnown RBP6.21□□□□□ -1.42
COPA-204ENST00000481522 RBM47A0AV96 593 aaKnown RBP6.2□□□□□ -1.42
COPA-204ENST00000481522 GNAT3A8MTJ3 354 aa6.2□□□□□ -1.42
COPA-204ENST00000481522 DCDC2CA8MYV0 355 aa6.2□□□□□ -1.42
COPA-204ENST00000481522 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.2□□□□□ -1.42
COPA-204ENST00000481522 GAL3ST3Q96A11 431 aa6.2□□□□□ -1.42
COPA-204ENST00000481522 MIR1-1HGQ9H1L0 117 aa6.2□□□□□ -1.42
COPA-204ENST00000481522 CARS2Q9HA77 564 aaKnown RBP6.2□□□□□ -1.42
COPA-204ENST00000481522 MYRFQ9Y2G1 1151 aa6.2□□□□□ -1.42
COPA-204ENST00000481522 CSADQ9Y600 493 aa6.2□□□□□ -1.42
COPA-204ENST00000481522 USP31Q70CQ4 1352 aa6.19□□□□□ -1.42
COPA-204ENST00000481522 PRAMEF27A3QJZ7 478 aa6.19□□□□□ -1.42
COPA-204ENST00000481522 SEPT6Q14141 434 aa6.19□□□□□ -1.42
COPA-204ENST00000481522 SPATS1Q496A3 300 aa6.19□□□□□ -1.42
COPA-204ENST00000481522 PPM1JQ5JR12 505 aa6.19□□□□□ -1.42
COPA-204ENST00000481522 AGMOQ6ZNB7 445 aa6.19□□□□□ -1.42
COPA-204ENST00000481522 HDXQ7Z353 690 aa6.19□□□□□ -1.42
COPA-204ENST00000481522 DCP1AQ9NPI6 582 aaPredicted RBP6.19□□□□□ -1.42
COPA-204ENST00000481522 C19orf73Q9NVV2 129 aa6.19□□□□□ -1.42
COPA-204ENST00000481522 WIPI1Q5MNZ9 446 aaPredicted RBP6.18□□□□□ -1.42
COPA-204ENST00000481522 C12orf40Q86WS4 652 aa6.18□□□□□ -1.42
COPA-204ENST00000481522 MENTQ9BUN1 341 aa6.18□□□□□ -1.42
COPA-204ENST00000481522 EPB41L4BQ9H329 900 aa6.18□□□□□ -1.42
COPA-204ENST00000481522 EIF4G1Q04637 1599 aaKnown RBP6.18□□□□□ -1.42
COPA-204ENST00000481522 NISCHQ9Y2I1 1504 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 FANCGO15287 622 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 PWP1Q13610 501 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 MRPL58Q14197 206 aaKnown RBP6.17□□□□□ -1.42
COPA-204ENST00000481522 LRFN4Q6PJG9 635 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 PLPPR2Q96GM1 343 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 CCDC120Q96HB5 630 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 FOXQ1Q9C009 403 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 TLR6Q9Y2C9 796 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 PCDHB5Q9Y5E4 795 aa6.17□□□□□ -1.42
COPA-204ENST00000481522 F6X3S4 739 aa6.16□□□□□ -1.42
COPA-204ENST00000481522 BPNT1O95861 308 aa6.16□□□□□ -1.42
COPA-204ENST00000481522 TFE3P19532 575 aaPredicted RBP6.16□□□□□ -1.42
COPA-204ENST00000481522 PTPN11Q06124 597 aaPredicted RBP6.16□□□□□ -1.42
COPA-204ENST00000481522 ZBTB37Q5TC79 503 aa6.16□□□□□ -1.42
COPA-204ENST00000481522 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.16□□□□□ -1.42
COPA-204ENST00000481522 RELL1Q8IUW5 271 aa6.16□□□□□ -1.42
COPA-204ENST00000481522 KCT2Q8NC54 265 aa6.16□□□□□ -1.42
COPA-204ENST00000481522 ATP13A1Q9HD20 1204 aa6.16□□□□□ -1.42
COPA-204ENST00000481522 PRDM5Q9NQX1 630 aaPredicted RBP6.16□□□□□ -1.42
COPA-204ENST00000481522 EOMESO95936 686 aa6.15□□□□□ -1.42
COPA-204ENST00000481522 SRFP11831 508 aa6.15□□□□□ -1.42
COPA-204ENST00000481522 GBP2P32456 591 aaPredicted RBP6.15□□□□□ -1.42
COPA-204ENST00000481522 ETF1P62495 437 aaKnown RBP6.15□□□□□ -1.42
COPA-204ENST00000481522 INPP5AQ14642 412 aa6.15□□□□□ -1.42
COPA-204ENST00000481522 TSNAXIP1Q2TAA8 658 aa6.15□□□□□ -1.42
COPA-204ENST00000481522 HS2ST1Q7LGA3 356 aa6.15□□□□□ -1.42
COPA-204ENST00000481522 PHC3Q8NDX5 983 aa6.15□□□□□ -1.42
COPA-204ENST00000481522 SEMA3GQ9NS98 782 aa6.15□□□□□ -1.42
COPA-204ENST00000481522 MAPK8IP1Q9UQF2 711 aa6.15□□□□□ -1.42
COPA-204ENST00000481522 SNCAIPQ9Y6H5 919 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms