RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 SUSD5O60279 629 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 GDF9O60383 454 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 SNX2O60749 519 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 AGR2O95994 175 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 CES1P23141 567 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 CCND1P24385 295 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 ARSDP51689 593 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 ADCY1Q08828 1119 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 PCBP1Q15365 356 aaKnown RBP eCLIP9.78□□□□□ -0.84
LSM5-210ENST00000480956 ABCB5Q2M3G0 1257 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 FAM133BQ5BKY9 247 aaKnown RBP9.78□□□□□ -0.84
LSM5-210ENST00000480956 FAM209AQ5JX71 171 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 DACT2Q5SW24 774 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 VHLLQ6RSH7 139 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 ANKRD23Q86SG2 305 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 RASSF3Q86WH2 238 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 FCHSD1Q86WN1 690 aa9.78□□□□□ -0.84
LSM5-210ENST00000480956 NKAPQ8N5F7 415 aaKnown RBP9.78□□□□□ -0.84
LSM5-210ENST00000480956 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.78□□□□□ -0.84
LSM5-210ENST00000480956 A0A1W2PRQ8 180 aa9.77□□□□□ -0.85
LSM5-210ENST00000480956 ENC1O14682 589 aa9.77□□□□□ -0.85
LSM5-210ENST00000480956 KHNYNO15037 678 aaKnown RBP9.77□□□□□ -0.85
LSM5-210ENST00000480956 ORC4O43929 436 aa9.77□□□□□ -0.85
LSM5-210ENST00000480956 NUCB1Q02818 461 aa9.77□□□□□ -0.85
LSM5-210ENST00000480956 ZNF697Q5TEC3 545 aa9.77□□□□□ -0.85
LSM5-210ENST00000480956 EPM2AIP1Q7L775 607 aaPredicted RBP9.77□□□□□ -0.85
LSM5-210ENST00000480956 SKAP1Q86WV1 359 aa9.77□□□□□ -0.85
LSM5-210ENST00000480956 DDX21Q9NR30 783 aaKnown RBP eCLIP9.77□□□□□ -0.85
LSM5-210ENST00000480956 DZANK1Q9NVP4 752 aa9.77□□□□□ -0.85
LSM5-210ENST00000480956 SAGE1Q9NXZ1 904 aa9.77□□□□□ -0.85
LSM5-210ENST00000480956 ABI2Q9NYB9 513 aaPredicted RBP9.77□□□□□ -0.85
LSM5-210ENST00000480956 KCNMB2Q9Y691 235 aa9.77□□□□□ -0.85
LSM5-210ENST00000480956 LILRA1O75019 489 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 EDN3P14138 238 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 POU3F2P20265 443 aaPredicted RBP9.76□□□□□ -0.85
LSM5-210ENST00000480956 GUCY2CP25092 1073 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 CYP2C19P33261 490 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 GTF2A2P52657 109 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 AK2P54819 239 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 EIF5P55010 431 aaKnown RBP9.76□□□□□ -0.85
LSM5-210ENST00000480956 GTF2H3Q13889 308 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 RSRC2Q7L4I2 434 aaKnown RBP9.76□□□□□ -0.85
LSM5-210ENST00000480956 RHPN1Q8TCX5 695 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 TM9SF2Q99805 663 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 IFT22Q9H7X7 185 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 SUCOQ9UBS9 1254 aaKnown RBP9.76□□□□□ -0.85
LSM5-210ENST00000480956 SAP30BPQ9UHR5 308 aaKnown RBP9.76□□□□□ -0.85
LSM5-210ENST00000480956 DACH1Q9UI36 760 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 SLC45A1Q9Y2W3 748 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 NUB1Q9Y5A7 615 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 SLC12A7Q9Y666 1083 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 TRBV23-1A0A0A0MS06 115 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 AGRPO00253 132 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 CILPO75339 1184 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 DNAJC8O75937 253 aaPredicted RBP9.76□□□□□ -0.85
LSM5-210ENST00000480956 RPN1P04843 607 aaKnown RBP9.76□□□□□ -0.85
LSM5-210ENST00000480956 CDC37Q16543 378 aaPredicted RBP9.76□□□□□ -0.85
LSM5-210ENST00000480956 IER5Q5VY09 327 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 POF1BQ8WVV4 589 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 SERINC2Q96SA4 455 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 MYD88Q99836 296 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 EHMT1Q9H9B1 1298 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 DDX20Q9UHI6 824 aaKnown RBP9.76□□□□□ -0.85
LSM5-210ENST00000480956 PCDHB5Q9Y5E4 795 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 PCDHB14Q9Y5E9 798 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 HRH3Q9Y5N1 445 aa9.76□□□□□ -0.85
LSM5-210ENST00000480956 TBX2Q13207 712 aaPredicted RBP9.75□□□□□ -0.85
LSM5-210ENST00000480956 GALEQ14376 348 aa9.75□□□□□ -0.85
LSM5-210ENST00000480956 SEPT7Q16181 437 aaKnown RBP9.75□□□□□ -0.85
LSM5-210ENST00000480956 PEAR1Q5VY43 1037 aaPredicted RBP9.75□□□□□ -0.85
LSM5-210ENST00000480956 TRIM22Q8IYM9 498 aa9.75□□□□□ -0.85
LSM5-210ENST00000480956 TBATAQ96M53 351 aa9.75□□□□□ -0.85
LSM5-210ENST00000480956 NECAB3Q96P71 396 aaPredicted RBP9.75□□□□□ -0.85
LSM5-210ENST00000480956 LIN7BQ9HAP6 207 aa9.75□□□□□ -0.85
LSM5-210ENST00000480956 ANLNQ9NQW6 1124 aa9.75□□□□□ -0.85
LSM5-210ENST00000480956 PYGMP11217 842 aa9.74□□□□□ -0.85
LSM5-210ENST00000480956 TXLNAP40222 546 aa9.74□□□□□ -0.85
LSM5-210ENST00000480956 ZSCAN30Q86W11 494 aa9.74□□□□□ -0.85
LSM5-210ENST00000480956 ACRBPQ8NEB7 543 aa9.74□□□□□ -0.85
LSM5-210ENST00000480956 PGBD4Q96DM1 585 aa9.74□□□□□ -0.85
LSM5-210ENST00000480956 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
LSM5-210ENST00000480956 A0A087WZG4 1122 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 C9IYK1 514 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 NEMP1O14524 444 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 KPNA6O60684 536 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 CD2BP2O95400 341 aaKnown RBP9.73□□□□□ -0.85
LSM5-210ENST00000480956 MYBL2P10244 700 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 FSHRP23945 695 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 FAM193AP78312 1265 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 LRRC69Q6ZNQ3 347 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 MYLK4Q86YV6 388 aaPredicted RBP9.73□□□□□ -0.85
LSM5-210ENST00000480956 CPA6Q8N4T0 437 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 ZSCAN1Q8NBB4 408 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 LRGUKQ96M69 825 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 MENTQ9BUN1 341 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 RIC8AQ9NPQ8 531 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 APOBEC2Q9Y235 224 aaKnown RBP9.73□□□□□ -0.85
LSM5-210ENST00000480956 GIT1Q9Y2X7 761 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 PCDHGB3Q9Y5G1 929 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 TRAV20A0A0B4J274 112 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms