RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 LETMD1Q6P1Q0 360 aa7.86□□□□□ -1.15
RGPD6-209ENST00000480894 LRFN4Q6PJG9 635 aa7.86□□□□□ -1.15
RGPD6-209ENST00000480894 TMC7Q7Z402 723 aa7.86□□□□□ -1.15
RGPD6-209ENST00000480894 CEP44Q9C0F1 390 aa7.86□□□□□ -1.15
RGPD6-209ENST00000480894 RNF32Q9H0A6 362 aa7.86□□□□□ -1.15
RGPD6-209ENST00000480894 RBAK-RBAKDNI3L0D1 243 aa7.85□□□□□ -1.15
RGPD6-209ENST00000480894 TNK2Q07912 1038 aa7.85□□□□□ -1.15
RGPD6-209ENST00000480894 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.85□□□□□ -1.15
RGPD6-209ENST00000480894 TMPRSS7Q7RTY8 843 aa7.85□□□□□ -1.15
RGPD6-209ENST00000480894 MCOLN1Q9GZU1 580 aa7.85□□□□□ -1.15
RGPD6-209ENST00000480894 TRHRP34981 398 aaPredicted RBP7.84□□□□□ -1.15
RGPD6-209ENST00000480894 KIR3DL1P43629 444 aa7.84□□□□□ -1.15
RGPD6-209ENST00000480894 DLG4P78352 724 aa7.84□□□□□ -1.15
RGPD6-209ENST00000480894 BAHD1Q8TBE0 780 aaPredicted RBP7.84□□□□□ -1.15
RGPD6-209ENST00000480894 COX4I2Q96KJ9 171 aa7.84□□□□□ -1.15
RGPD6-209ENST00000480894 KCNC2Q96PR1 638 aa7.84□□□□□ -1.15
RGPD6-209ENST00000480894 WNT10AQ9GZT5 417 aa7.84□□□□□ -1.15
RGPD6-209ENST00000480894 ADAMTS10Q9H324 1103 aa7.84□□□□□ -1.15
RGPD6-209ENST00000480894 SP110Q9HB58 689 aa7.84□□□□□ -1.15
RGPD6-209ENST00000480894 KIAA1522Q9P206 1035 aaPredicted RBP7.84□□□□□ -1.15
RGPD6-209ENST00000480894 EAPPQ56P03 285 aaPredicted RBP7.83□□□□□ -1.16
RGPD6-209ENST00000480894 IRF2BP1Q8IU81 584 aa7.83□□□□□ -1.16
RGPD6-209ENST00000480894 CYP8B1Q9UNU6 501 aa7.83□□□□□ -1.16
RGPD6-209ENST00000480894 TREHO43280 583 aa7.82□□□□□ -1.16
RGPD6-209ENST00000480894 FBXO24O75426 580 aa7.82□□□□□ -1.16
RGPD6-209ENST00000480894 CYP7A1P22680 504 aa7.82□□□□□ -1.16
RGPD6-209ENST00000480894 GSTT1P30711 240 aa7.82□□□□□ -1.16
RGPD6-209ENST00000480894 FMR1Q06787 632 aaKnown RBP eCLIP7.82□□□□□ -1.16
RGPD6-209ENST00000480894 HID1Q8IV36 788 aa7.82□□□□□ -1.16
RGPD6-209ENST00000480894 PLPPR2Q96GM1 343 aa7.82□□□□□ -1.16
RGPD6-209ENST00000480894 PPM1HQ9ULR3 514 aa7.82□□□□□ -1.16
RGPD6-209ENST00000480894 MYOCOSA0A1B0GUC4 107 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 SEMA7AO75326 666 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 CST3P01034 146 aaPredicted RBP7.81□□□□□ -1.16
RGPD6-209ENST00000480894 P4HBP07237 508 aaKnown RBP7.81□□□□□ -1.16
RGPD6-209ENST00000480894 VAMP1P23763 118 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 PTPN11Q06124 597 aaPredicted RBP7.81□□□□□ -1.16
RGPD6-209ENST00000480894 PRAMEF13Q5VWM6 474 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 DBX2Q6ZNG2 339 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 HDXQ7Z353 690 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 CREG2Q8IUH2 290 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 PIWIL2Q8TC59 973 aaKnown RBP7.81□□□□□ -1.16
RGPD6-209ENST00000480894 BCL11AQ9H165 835 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 SLC6A17Q9H1V8 727 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 IGSF5Q9NSI5 407 aa7.81□□□□□ -1.16
RGPD6-209ENST00000480894 WASH4PA8MWX3 477 aa7.8□□□□□ -1.16
RGPD6-209ENST00000480894 PEX10O60683 326 aa7.8□□□□□ -1.16
RGPD6-209ENST00000480894 SYN1P17600 705 aa7.8□□□□□ -1.16
RGPD6-209ENST00000480894 ETF1P62495 437 aaKnown RBP7.8□□□□□ -1.16
RGPD6-209ENST00000480894 NFIXQ14938 502 aa7.8□□□□□ -1.16
RGPD6-209ENST00000480894 XAGE3Q8WTP9 111 aa7.8□□□□□ -1.16
RGPD6-209ENST00000480894 KRTAP9-8Q9BYQ0 159 aa7.8□□□□□ -1.16
RGPD6-209ENST00000480894 PNMA6FA0A0J9YX94 578 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 TAGLNQ01995 201 aaKnown RBP7.79□□□□□ -1.16
RGPD6-209ENST00000480894 DSC3Q14574 896 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 TCERG1LQ5VWI1 586 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 PCNX4Q63HM2 1172 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 ZNF605Q86T29 641 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 LILRA2Q8N149 483 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 MARCH10Q8NA82 808 aaPredicted RBP7.79□□□□□ -1.16
RGPD6-209ENST00000480894 PDZD8Q8NEN9 1154 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 ANKRD24Q8TF21 1146 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 C19orf44Q9H6X5 657 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 RTEL1Q9NZ71 1219 aa7.79□□□□□ -1.16
RGPD6-209ENST00000480894 CNOT6Q9ULM6 557 aaKnown RBP7.79□□□□□ -1.16
RGPD6-209ENST00000480894 KRTAP10-2P60368 255 aa7.78□□□□□ -1.16
RGPD6-209ENST00000480894 GAB4Q2WGN9 574 aa7.78□□□□□ -1.16
RGPD6-209ENST00000480894 CDH24Q86UP0 819 aa7.78□□□□□ -1.16
RGPD6-209ENST00000480894 SRCIN1Q9C0H9 1055 aa7.78□□□□□ -1.16
RGPD6-209ENST00000480894 SNCAIPQ9Y6H5 919 aa7.78□□□□□ -1.16
RGPD6-209ENST00000480894 TRIM13O60858 407 aa7.77□□□□□ -1.17
RGPD6-209ENST00000480894 CELA3AP09093 270 aa7.77□□□□□ -1.17
RGPD6-209ENST00000480894 ZGLP1P0C6A0 271 aa7.77□□□□□ -1.17
RGPD6-209ENST00000480894 ENOX2Q16206 610 aaKnown RBP7.77□□□□□ -1.17
RGPD6-209ENST00000480894 TIGD5Q53EQ6 642 aa7.77□□□□□ -1.17
RGPD6-209ENST00000480894 WIPI1Q5MNZ9 446 aaPredicted RBP7.77□□□□□ -1.17
RGPD6-209ENST00000480894 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.77□□□□□ -1.17
RGPD6-209ENST00000480894 GAL3ST3Q96A11 431 aa7.77□□□□□ -1.17
RGPD6-209ENST00000480894 DUSP15Q9H1R2 295 aaPredicted RBP7.77□□□□□ -1.17
RGPD6-209ENST00000480894 GCM1Q9NP62 436 aa7.77□□□□□ -1.17
RGPD6-209ENST00000480894 TEX51A0A1B0GUA7 166 aa7.76□□□□□ -1.17
RGPD6-209ENST00000480894 TPP2P29144 1249 aaPredicted RBP7.76□□□□□ -1.17
RGPD6-209ENST00000480894 ZNF385BQ569K4 471 aa7.76□□□□□ -1.17
RGPD6-209ENST00000480894 CXorf38Q8TB03 319 aa7.76□□□□□ -1.17
RGPD6-209ENST00000480894 INTS4Q96HW7 963 aaKnown RBP7.76□□□□□ -1.17
RGPD6-209ENST00000480894 Q96M66 194 aa7.76□□□□□ -1.17
RGPD6-209ENST00000480894 ZNF552Q9H707 407 aaPredicted RBP7.76□□□□□ -1.17
RGPD6-209ENST00000480894 CWC22Q9HCG8 908 aaKnown RBP7.76□□□□□ -1.17
RGPD6-209ENST00000480894 KCTD3Q9Y597 815 aa7.76□□□□□ -1.17
RGPD6-209ENST00000480894 GRK4P32298 578 aa7.75□□□□□ -1.17
RGPD6-209ENST00000480894 MAPK8P45983 427 aa7.75□□□□□ -1.17
RGPD6-209ENST00000480894 CDK8P49336 464 aa7.75□□□□□ -1.17
RGPD6-209ENST00000480894 PLCB3Q01970 1234 aa7.75□□□□□ -1.17
RGPD6-209ENST00000480894 OXR1Q8N573 874 aa7.75□□□□□ -1.17
RGPD6-209ENST00000480894 TRIT1Q9H3H1 467 aaKnown RBP7.75□□□□□ -1.17
RGPD6-209ENST00000480894 YBX2Q9Y2T7 364 aaKnown RBP7.75□□□□□ -1.17
RGPD6-209ENST00000480894 ADAMTS20P59510 1910 aa7.74□□□□□ -1.17
RGPD6-209ENST00000480894 FITM1A5D6W6 292 aa7.74□□□□□ -1.17
RGPD6-209ENST00000480894 RFXAPO00287 272 aa7.74□□□□□ -1.17
RGPD6-209ENST00000480894 PRPF40AO75400 957 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms