RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 PPP2R5BQ15173 497 aa19.61■□□□□ 0.73
PKD1-213ENST00000480227 VPS72Q15906 364 aa19.61■□□□□ 0.73
PKD1-213ENST00000480227 TPTE2Q6XPS3 522 aa19.61■□□□□ 0.73
PKD1-213ENST00000480227 HOOK1Q9UJC3 728 aaKnown RBP19.61■□□□□ 0.73
PKD1-213ENST00000480227 CCNL1Q9UK58 526 aaPredicted RBP19.61■□□□□ 0.73
PKD1-213ENST00000480227 MAN1B1Q9UKM7 699 aa19.61■□□□□ 0.73
PKD1-213ENST00000480227 LAMB1P07942 1786 aa19.6■□□□□ 0.73
PKD1-213ENST00000480227 PRPF3O43395 683 aaKnown RBP19.6■□□□□ 0.73
PKD1-213ENST00000480227 TM4SF1P30408 202 aa19.6■□□□□ 0.73
PKD1-213ENST00000480227 KRT2P35908 639 aa19.6■□□□□ 0.73
PKD1-213ENST00000480227 ARHGEF1Q92888 912 aaKnown RBP19.6■□□□□ 0.73
PKD1-213ENST00000480227 CRNKL1Q9BZJ0 848 aaKnown RBP19.6■□□□□ 0.73
PKD1-213ENST00000480227 NPHP1O15259 732 aa19.59■□□□□ 0.73
PKD1-213ENST00000480227 XBP1P17861 261 aa19.59■□□□□ 0.73
PKD1-213ENST00000480227 ANKRD2Q9GZV1 360 aa19.59■□□□□ 0.73
PKD1-213ENST00000480227 TNRC6CQ9HCJ0 1690 aaKnown RBP19.59■□□□□ 0.73
PKD1-213ENST00000480227 TMEM232C9JQI7 657 aa19.59■□□□□ 0.73
PKD1-213ENST00000480227 RC3H1Q5TC82 1133 aaKnown RBP19.59■□□□□ 0.73
PKD1-213ENST00000480227 TMTC3Q6ZXV5 915 aa19.59■□□□□ 0.73
PKD1-213ENST00000480227 SRBD1Q8N5C6 995 aaKnown RBP19.59■□□□□ 0.73
PKD1-213ENST00000480227 CEP131Q9UPN4 1083 aa19.59■□□□□ 0.73
PKD1-213ENST00000480227 RTCBQ9Y3I0 505 aaKnown RBP19.59■□□□□ 0.73
PKD1-213ENST00000480227 TRIM75PA6NK02 468 aa19.58■□□□□ 0.73
PKD1-213ENST00000480227 GOLGA8FQ08AF8 430 aa19.58■□□□□ 0.73
PKD1-213ENST00000480227 GOLGA8DPQ0D2H9 430 aa19.58■□□□□ 0.73
PKD1-213ENST00000480227 KIF18AQ8NI77 898 aa19.58■□□□□ 0.73
PKD1-213ENST00000480227 EPSTI1Q96J88 318 aa19.58■□□□□ 0.73
PKD1-213ENST00000480227 PPP1R13BQ96KQ4 1090 aa19.58■□□□□ 0.73
PKD1-213ENST00000480227 KCND1Q9NSA2 647 aa19.58■□□□□ 0.73
PKD1-213ENST00000480227 RBM28Q9NW13 759 aaKnown RBP19.58■□□□□ 0.73
PKD1-213ENST00000480227 KIAA1551Q9HCM1 1747 aa19.58■□□□□ 0.73
PKD1-213ENST00000480227 A0A087X0B3 334 aa19.58■□□□□ 0.72
PKD1-213ENST00000480227 CBFA2T2O43439 604 aa19.58■□□□□ 0.72
PKD1-213ENST00000480227 ACTN4O43707 911 aaKnown RBP19.58■□□□□ 0.72
PKD1-213ENST00000480227 NRDCO43847 1150 aa19.58■□□□□ 0.72
PKD1-213ENST00000480227 VEGFAP15692 232 aaPredicted RBP19.58■□□□□ 0.72
PKD1-213ENST00000480227 NPY5RQ15761 445 aa19.58■□□□□ 0.72
PKD1-213ENST00000480227 ZNF579Q8NAF0 562 aaKnown RBP19.58■□□□□ 0.72
PKD1-213ENST00000480227 SMARCE1Q969G3 411 aa19.58■□□□□ 0.72
PKD1-213ENST00000480227 CNTNAP5Q8WYK1 1306 aa19.58■□□□□ 0.72
PKD1-213ENST00000480227 ORC4O43929 436 aa19.57■□□□□ 0.72
PKD1-213ENST00000480227 USP17L8P0C7I0 530 aa19.57■□□□□ 0.72
PKD1-213ENST00000480227 PCP11498 1178 aaKnown RBP19.57■□□□□ 0.72
PKD1-213ENST00000480227 FMR1Q06787 632 aaKnown RBP eCLIP19.57■□□□□ 0.72
PKD1-213ENST00000480227 DDAH1O94760 285 aa19.57■□□□□ 0.72
PKD1-213ENST00000480227 DZIP1Q86YF9 867 aaKnown RBP19.57■□□□□ 0.72
PKD1-213ENST00000480227 TRMT44Q8IYL2 757 aaKnown RBP19.57■□□□□ 0.72
PKD1-213ENST00000480227 ATP8A2Q9NTI2 1148 aa19.57■□□□□ 0.72
PKD1-213ENST00000480227 MCM9Q9NXL9 1143 aa19.57■□□□□ 0.72
PKD1-213ENST00000480227 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.57■□□□□ 0.72
PKD1-213ENST00000480227 ZNF215Q9UL58 517 aaPredicted RBP19.57■□□□□ 0.72
PKD1-213ENST00000480227 V9GYY5 206 aaPredicted RBP19.57■□□□□ 0.72
PKD1-213ENST00000480227 PDS5AQ29RF7 1337 aaKnown RBP19.56■□□□□ 0.72
PKD1-213ENST00000480227 RGL2O15211 777 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 TOM1O60784 492 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 CALM1P0DP23 149 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 CALM2P0DP24 149 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 CALM3P0DP25 149 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 CBX1P83916 185 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 ZNF174Q15697 407 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 CTCFLQ8NI51 663 aaPredicted RBP19.56■□□□□ 0.72
PKD1-213ENST00000480227 DHX58Q96C10 678 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 GPR101Q96P66 508 aaPredicted RBP19.56■□□□□ 0.72
PKD1-213ENST00000480227 SBF2Q86WG5 1849 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 IRS2Q9Y4H2 1338 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 TSPY2A6NKD2 308 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 ADAMTS3O15072 1205 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 TOP1P11387 765 aaKnown RBP19.56■□□□□ 0.72
PKD1-213ENST00000480227 SARSP49591 514 aaKnown RBP19.56■□□□□ 0.72
PKD1-213ENST00000480227 NT5DC1Q5TFE4 455 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 VSTM4Q8IW00 320 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 ELOA2Q8IYF1 753 aaPredicted RBP19.56■□□□□ 0.72
PKD1-213ENST00000480227 ANKIB1Q9P2G1 1089 aa19.56■□□□□ 0.72
PKD1-213ENST00000480227 SPDYE4A6NLX3 237 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 CASP1P29466 404 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 NFIXQ14938 502 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 TNFRSF25Q93038 417 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 INTS13Q9NVM9 706 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 ARPP21Q9UBL0 812 aaPredicted RBP19.55■□□□□ 0.72
PKD1-213ENST00000480227 NFE2L3Q9Y4A8 694 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 TAF1LQ8IZX4 1826 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 MAST2Q6P0Q8 1798 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 CDK11BP21127 795 aaKnown RBP19.55■□□□□ 0.72
PKD1-213ENST00000480227 MORC3Q14149 939 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 SYCP1Q15431 976 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 GRIK5Q16478 980 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 SYT10Q6XYQ8 523 aa19.55■□□□□ 0.72
PKD1-213ENST00000480227 PSDA5PKW4 1024 aaPredicted RBP19.54■□□□□ 0.72
PKD1-213ENST00000480227 AFMP43652 599 aa19.54■□□□□ 0.72
PKD1-213ENST00000480227 DHX8Q14562 1220 aaKnown RBP19.54■□□□□ 0.72
PKD1-213ENST00000480227 RCSD1Q6JBY9 416 aa19.54■□□□□ 0.72
PKD1-213ENST00000480227 SYMPKQ92797 1274 aaKnown RBP19.54■□□□□ 0.72
PKD1-213ENST00000480227 MED15Q96RN5 788 aa19.54■□□□□ 0.72
PKD1-213ENST00000480227 DIXDC1Q155Q3 683 aa19.54■□□□□ 0.72
PKD1-213ENST00000480227 MLKLQ8NB16 471 aa19.54■□□□□ 0.72
PKD1-213ENST00000480227 DYNLL2Q96FJ2 89 aa19.54■□□□□ 0.72
PKD1-213ENST00000480227 KIF2AO00139 706 aaPredicted RBP19.53■□□□□ 0.72
PKD1-213ENST00000480227 BRMS1Q9HCU9 246 aa19.53■□□□□ 0.72
PKD1-213ENST00000480227 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
PKD1-213ENST00000480227 RFC4P35249 363 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms