RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 HYAL3O43820 417 aaPredicted RBP8.19□□□□□ -1.1
PBRM1-220ENST00000480064 SMNDC1O75940 238 aaKnown RBP eCLIP8.19□□□□□ -1.1
PBRM1-220ENST00000480064 ALX3O95076 343 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 FAM153BP0C7A2 387 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 BMP6P22004 513 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 PCDH1Q08174 1060 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 TTF1Q15361 905 aaPredicted RBP8.19□□□□□ -1.1
PBRM1-220ENST00000480064 PRR23CQ6ZRP0 262 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 DZIP1LQ8IYY4 767 aaKnown RBP8.19□□□□□ -1.1
PBRM1-220ENST00000480064 TMEM40Q8WWA1 233 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 BSNDQ8WZ55 320 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 RPS6KC1Q96S38 1066 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 PBX4Q9BYU1 374 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 MUC3BQ9H195 1237 aa8.19□□□□□ -1.1
PBRM1-220ENST00000480064 MEIS3P2A8K0S8 358 aa8.18□□□□□ -1.1
PBRM1-220ENST00000480064 F8W735 103 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-220ENST00000480064 SUSD5O60279 629 aa8.18□□□□□ -1.1
PBRM1-220ENST00000480064 CAND2O75155 1236 aa8.18□□□□□ -1.1
PBRM1-220ENST00000480064 ARNTP27540 789 aa8.18□□□□□ -1.1
PBRM1-220ENST00000480064 HDAC1Q13547 482 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-220ENST00000480064 RASIP1Q5U651 963 aa8.18□□□□□ -1.1
PBRM1-220ENST00000480064 SCARA3Q6AZY7 606 aa8.18□□□□□ -1.1
PBRM1-220ENST00000480064 ZBTB38Q8NAP3 1195 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-220ENST00000480064 TSR2Q969E8 191 aaKnown RBP8.18□□□□□ -1.1
PBRM1-220ENST00000480064 CDC6Q99741 560 aa8.18□□□□□ -1.1
PBRM1-220ENST00000480064 FAM126AQ9BYI3 521 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-220ENST00000480064 RASSF4Q9H2L5 321 aa8.18□□□□□ -1.1
PBRM1-220ENST00000480064 PHAXQ9H814 394 aaKnown RBP8.18□□□□□ -1.1
PBRM1-220ENST00000480064 POLR3KQ9Y2Y1 108 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-220ENST00000480064 TSPAN6O43657 245 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 CREB3O43889 395 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 RASGRP1O95267 797 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 B3GALT4O96024 378 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 KRT18P05783 430 aaKnown RBP8.17□□□□□ -1.1
PBRM1-220ENST00000480064 HNRNPUQ00839 825 aaKnown RBP eCLIP8.17□□□□□ -1.1
PBRM1-220ENST00000480064 SLC10A6Q3KNW5 377 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 TAB3Q8N5C8 712 aaPredicted RBP8.17□□□□□ -1.1
PBRM1-220ENST00000480064 UBR7Q8N806 425 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 ACSBG1Q96GR2 724 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 KIF2CQ99661 725 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 RUSC1Q9BVN2 902 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 RNF112Q9ULX5 631 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 MAPRE3Q9UPY8 281 aa8.17□□□□□ -1.1
PBRM1-220ENST00000480064 UPK3BL1B0FP48 263 aa8.16□□□□□ -1.1
PBRM1-220ENST00000480064 HMGB1P1B2RPK0 211 aaPredicted RBP8.16□□□□□ -1.1
PBRM1-220ENST00000480064 UPK3BL2E5RIL1 263 aa8.16□□□□□ -1.1
PBRM1-220ENST00000480064 NFKBIEO00221 500 aa8.16□□□□□ -1.1
PBRM1-220ENST00000480064 RFPL3O75679 317 aa8.16□□□□□ -1.1
PBRM1-220ENST00000480064 NAT2P11245 290 aa8.16□□□□□ -1.1
PBRM1-220ENST00000480064 GUCY2FP51841 1108 aa8.16□□□□□ -1.1
PBRM1-220ENST00000480064 ATP11AP98196 1134 aa8.16□□□□□ -1.1
PBRM1-220ENST00000480064 PLD2O14939 933 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 HTR3BO95264 441 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 ATF3P18847 181 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 GNALP38405 381 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 BRD3Q15059 726 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 CEP135Q66GS9 1140 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 PPP4R4Q6NUP7 873 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 KIAA1211LQ6NV74 962 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 CNNM4Q6P4Q7 775 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 RAVER1Q8IY67 606 aaKnown RBP8.15□□□□□ -1.1
PBRM1-220ENST00000480064 RIN3Q8TB24 985 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 GRIN3AQ8TCU5 1115 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 LACRTQ9GZZ8 138 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 ANTXR1Q9H6X2 564 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 NCOA5Q9HCD5 579 aaKnown RBP8.15□□□□□ -1.1
PBRM1-220ENST00000480064 GMIPQ9P107 970 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 COMMD10Q9Y6G5 202 aa8.15□□□□□ -1.1
PBRM1-220ENST00000480064 A0A087X0B3 334 aa8.14□□□□□ -1.11
PBRM1-220ENST00000480064 LINC01387J3KSC0 135 aa8.14□□□□□ -1.11
PBRM1-220ENST00000480064 PTPRAP18433 802 aa8.14□□□□□ -1.11
PBRM1-220ENST00000480064 AP3B2Q13367 1082 aa8.14□□□□□ -1.11
PBRM1-220ENST00000480064 UBE4AQ14139 1066 aa8.14□□□□□ -1.11
PBRM1-220ENST00000480064 SAFB2Q14151 953 aaKnown RBP eCLIP8.14□□□□□ -1.11
PBRM1-220ENST00000480064 NFE2Q16621 373 aaPredicted RBP8.14□□□□□ -1.11
PBRM1-220ENST00000480064 FNDC3BQ53EP0 1204 aaKnown RBP8.14□□□□□ -1.11
PBRM1-220ENST00000480064 WIPI1Q5MNZ9 446 aaPredicted RBP8.14□□□□□ -1.11
PBRM1-220ENST00000480064 MAP1SQ66K74 1059 aaPredicted RBP8.14□□□□□ -1.11
PBRM1-220ENST00000480064 OVOS1Q6IE37 1185 aa8.14□□□□□ -1.11
PBRM1-220ENST00000480064 RNF180Q86T96 592 aa8.14□□□□□ -1.11
PBRM1-220ENST00000480064 AGGF1Q8N302 714 aaeCLIP8.14□□□□□ -1.11
PBRM1-220ENST00000480064 GALNT11Q8NCW6 608 aa8.14□□□□□ -1.11
PBRM1-220ENST00000480064 ADCY3O60266 1144 aa8.13□□□□□ -1.11
PBRM1-220ENST00000480064 GLB1P16278 677 aa8.13□□□□□ -1.11
PBRM1-220ENST00000480064 POU3F3P20264 500 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-220ENST00000480064 CDC27P30260 824 aa8.13□□□□□ -1.11
PBRM1-220ENST00000480064 SLC7A5Q01650 507 aa8.13□□□□□ -1.11
PBRM1-220ENST00000480064 CBX2Q14781 532 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-220ENST00000480064 UNC5AQ6ZN44 842 aa8.13□□□□□ -1.11
PBRM1-220ENST00000480064 Q6ZS46 218 aa8.13□□□□□ -1.11
PBRM1-220ENST00000480064 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
PBRM1-220ENST00000480064 SMAD5Q99717 465 aaKnown RBP8.13□□□□□ -1.11
PBRM1-220ENST00000480064 PRDM16Q9HAZ2 1276 aa8.13□□□□□ -1.11
PBRM1-220ENST00000480064 PCDHA4Q9UN74 947 aa8.13□□□□□ -1.11
PBRM1-220ENST00000480064 WASHC2CQ9Y4E1 1318 aa8.12□□□□□ -1.11
PBRM1-220ENST00000480064 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
PBRM1-220ENST00000480064 FAM86C2PA6NEL3 165 aa8.12□□□□□ -1.11
PBRM1-220ENST00000480064 GSG1L2A8MUP6 293 aa8.12□□□□□ -1.11
PBRM1-220ENST00000480064 RAPGEF3O95398 923 aa8.12□□□□□ -1.11
PBRM1-220ENST00000480064 SCGB1D2O95969 90 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms