RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 FUT2Q10981 343 aa21.89■■□□□ 1.09
TNFRSF8-204ENST00000479933 SBK1Q52WX2 424 aa21.89■■□□□ 1.09
TNFRSF8-204ENST00000479933 CMTR1Q8N1G2 835 aaKnown RBP21.89■■□□□ 1.09
TNFRSF8-204ENST00000479933 CCDC34Q96HJ3 373 aa21.89■■□□□ 1.09
TNFRSF8-204ENST00000479933 PHF20Q9BVI0 1012 aa21.89■■□□□ 1.09
TNFRSF8-204ENST00000479933 KCNQ4P56696 695 aa21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 NR5A1Q13285 461 aa21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 C16orf45Q96MC5 204 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 SRP68Q9UHB9 627 aaKnown RBP21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 TRIM75PA6NK02 468 aa21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 FANCCQ00597 558 aa21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 MDM2Q00987 491 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 TROAPQ12815 778 aa21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 PKN1Q16512 942 aa21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 DCP1AQ9NPI6 582 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 DACH1Q9UI36 760 aa21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 PCDHB6Q9Y5E3 794 aa21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 PCDHA5Q9Y5H7 936 aa21.88■■□□□ 1.09
TNFRSF8-204ENST00000479933 CYP2D7A0A087X1C5 515 aa21.87■■□□□ 1.09
TNFRSF8-204ENST00000479933 ARID5BQ14865 1188 aa21.87■■□□□ 1.09
TNFRSF8-204ENST00000479933 C8orf37Q96NL8 207 aa21.87■■□□□ 1.09
TNFRSF8-204ENST00000479933 CABP5Q9NP86 173 aa21.87■■□□□ 1.09
TNFRSF8-204ENST00000479933 CCNL1Q9UK58 526 aaPredicted RBP21.87■■□□□ 1.09
TNFRSF8-204ENST00000479933 KLRK1P26718 216 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 PDE4BQ07343 736 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 POSTNQ15063 836 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 TRIML1Q8N9V2 468 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 OXER1Q8TDS5 423 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 KCNJ6P48051 423 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 NT5DC1Q5TFE4 455 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 TMTC3Q6ZXV5 915 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 TMC6Q7Z403 805 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 CTCFLQ8NI51 663 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 AATFQ9NY61 560 aaKnown RBP eCLIP21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 TFCP2L1Q9NZI6 479 aa21.86■■□□□ 1.09
TNFRSF8-204ENST00000479933 KIF2AO00139 706 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 LMOD1P29536 600 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 ISM2Q6H9L7 571 aa21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 PLCD3Q8N3E9 789 aa21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 V9GY48 417 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 TAF1LQ8IZX4 1826 aa21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 PRDM1O75626 825 aa21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 SFPQP23246 707 aaKnown RBP eCLIP21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 CYP2C19P33261 490 aa21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 FNBP4Q8N3X1 1017 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 MLKLQ8NB16 471 aa21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 VPS54Q9P1Q0 977 aa21.85■■□□□ 1.09
TNFRSF8-204ENST00000479933 THSD7AQ9UPZ6 1657 aa21.84■■□□□ 1.09
TNFRSF8-204ENST00000479933 POLR2DO15514 142 aaKnown RBP21.84■■□□□ 1.09
TNFRSF8-204ENST00000479933 TM4SF1P30408 202 aa21.84■■□□□ 1.09
TNFRSF8-204ENST00000479933 FOXP4Q8IVH2 680 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF8-204ENST00000479933 SMARCE1Q969G3 411 aa21.84■■□□□ 1.09
TNFRSF8-204ENST00000479933 FERMT2Q96AC1 680 aa21.84■■□□□ 1.09
TNFRSF8-204ENST00000479933 HSD3B7Q9H2F3 369 aa21.84■■□□□ 1.09
TNFRSF8-204ENST00000479933 LY75O60449 1722 aa21.84■■□□□ 1.09
TNFRSF8-204ENST00000479933 SMIM22K7EJ46 135 aa21.83■■□□□ 1.09
TNFRSF8-204ENST00000479933 PLEKHA8P1O95397 391 aa21.83■■□□□ 1.09
TNFRSF8-204ENST00000479933 PTPN14Q15678 1187 aa21.83■■□□□ 1.09
TNFRSF8-204ENST00000479933 KMT5BQ4FZB7 885 aa21.83■■□□□ 1.09
TNFRSF8-204ENST00000479933 CEP135Q66GS9 1140 aa21.83■■□□□ 1.09
TNFRSF8-204ENST00000479933 DZIP1Q86YF9 867 aaKnown RBP21.83■■□□□ 1.09
TNFRSF8-204ENST00000479933 CCAR2Q8N163 923 aaKnown RBP21.83■■□□□ 1.09
TNFRSF8-204ENST00000479933 SERPINC1P01008 464 aa21.83■■□□□ 1.08
TNFRSF8-204ENST00000479933 UBASH3AP57075 661 aa21.83■■□□□ 1.08
TNFRSF8-204ENST00000479933 NYAP1Q6ZVC0 841 aa21.83■■□□□ 1.08
TNFRSF8-204ENST00000479933 WDR66Q8TBY9 1149 aa21.83■■□□□ 1.08
TNFRSF8-204ENST00000479933 ARHGEF1Q92888 912 aaKnown RBP21.83■■□□□ 1.08
TNFRSF8-204ENST00000479933 SERTAD1Q9UHV2 236 aa21.83■■□□□ 1.08
TNFRSF8-204ENST00000479933 LEMD3Q9Y2U8 911 aa21.83■■□□□ 1.08
TNFRSF8-204ENST00000479933 IRS2Q9Y4H2 1338 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 PRDX5P30044 214 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 SARSP49591 514 aaKnown RBP21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 IRX3P78415 501 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 CT47A1Q5JQC4 288 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 SPECC1Q5M775 1068 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 PTF1AQ7RTS3 328 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 MAN1B1Q9UKM7 699 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 CNTNAP5Q8WYK1 1306 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 NPHP1O15259 732 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 GRIN1Q05586 938 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 CCDC178Q5BJE1 867 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 SMIM5Q71RC9 77 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 CSRNP2Q9H175 543 aa21.82■■□□□ 1.08
TNFRSF8-204ENST00000479933 ACTN4O43707 911 aaKnown RBP21.81■■□□□ 1.08
TNFRSF8-204ENST00000479933 ATP2B1P20020 1258 aa21.81■■□□□ 1.08
TNFRSF8-204ENST00000479933 KIF5BP33176 963 aa21.81■■□□□ 1.08
TNFRSF8-204ENST00000479933 GSTO1P78417 241 aa21.81■■□□□ 1.08
TNFRSF8-204ENST00000479933 EFCC1Q9HA90 598 aa21.81■■□□□ 1.08
TNFRSF8-204ENST00000479933 TUBB4AP04350 444 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 ATP1A3P13637 1013 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 MORC3Q14149 939 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 ARMCX5Q6P1M9 558 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 SHISA4Q96DD7 197 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 ERO1AQ96HE7 468 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 TNRC6CQ9HCJ0 1690 aaKnown RBP21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 PSDA5PKW4 1024 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 TSPY2A6NKD2 308 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 RFC4P35249 363 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 TRAPPC10P48553 1259 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 GRAPQ13588 217 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms