RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 ZNF654Q8IZM8 581 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 CEP95Q96GE4 821 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.6■□□□□ 0.25
RPP40-205ENST00000479782 ZNF341Q9BYN7 854 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 KAT14Q9H8E8 782 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 KANSL2Q9H9L4 492 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 RRAGCQ9HB90 399 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 SENP2Q9HC62 589 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 GINM1Q9NU53 330 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
RPP40-205ENST00000479782 STX8Q9UNK0 236 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.6■□□□□ 0.25
RPP40-205ENST00000479782 POLR2AP24928 1970 aaKnown RBP16.6■□□□□ 0.25
RPP40-205ENST00000479782 ATAD5Q96QE3 1844 aa16.59■□□□□ 0.25
RPP40-205ENST00000479782 ZBTB43O43298 467 aa16.59■□□□□ 0.25
RPP40-205ENST00000479782 DHX16O60231 1041 aaKnown RBP16.59■□□□□ 0.25
RPP40-205ENST00000479782 DDAH1O94760 285 aa16.59■□□□□ 0.25
RPP40-205ENST00000479782 TTLL1O95922 423 aa16.59■□□□□ 0.25
RPP40-205ENST00000479782 CAP2P40123 477 aa16.59■□□□□ 0.25
RPP40-205ENST00000479782 STK3Q13188 491 aa16.59■□□□□ 0.25
RPP40-205ENST00000479782 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
RPP40-205ENST00000479782 PHF20L1A8MW92 1017 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 ADM5C9JUS6 153 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 CTNND1O60716 968 aaKnown RBP16.58■□□□□ 0.24
RPP40-205ENST00000479782 GDF11O95390 407 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 TOP1P11387 765 aaKnown RBP16.58■□□□□ 0.24
RPP40-205ENST00000479782 METAP2P50579 478 aaKnown RBP eCLIP16.58■□□□□ 0.24
RPP40-205ENST00000479782 SCRN1Q12765 414 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 CDC37L1Q7L3B6 337 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 MICU3Q86XE3 530 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 CCDC83Q8IWF9 413 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 MAP3K14Q99558 947 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 TMEM47Q9BQJ4 181 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 NYAP2Q9P242 653 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 HPS5Q9UPZ3 1129 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 SSC5DA1L4H1 1573 aa16.58■□□□□ 0.24
RPP40-205ENST00000479782 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 DOCK1Q14185 1865 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 CCDC196A0A1B0GTZ2 297 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 GOLGA8AA7E2F4 631 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 GH2P01242 217 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 ASNSP08243 561 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 NF2P35240 595 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 TROAPQ12815 778 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 RRP1BQ14684 758 aaKnown RBP16.57■□□□□ 0.24
RPP40-205ENST00000479782 LDHDQ86WU2 507 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 NECAB1Q8N987 351 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 PNMA1Q8ND90 353 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
RPP40-205ENST00000479782 ZNF112Q9UJU3 913 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 ZBTB21Q9ULJ3 1066 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 SYNPO2Q9UMS6 1093 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 CLEC11AQ9Y240 323 aa16.57■□□□□ 0.24
RPP40-205ENST00000479782 GUCY1A2P33402 732 aa16.56■□□□□ 0.24
RPP40-205ENST00000479782 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
RPP40-205ENST00000479782 ICA1Q05084 483 aa16.56■□□□□ 0.24
RPP40-205ENST00000479782 ST3GAL1Q11201 340 aa16.56■□□□□ 0.24
RPP40-205ENST00000479782 SEPT2Q15019 361 aa16.56■□□□□ 0.24
RPP40-205ENST00000479782 RAB3GAP1Q15042 981 aa16.56■□□□□ 0.24
RPP40-205ENST00000479782 PRAMEF18Q5VWM3 479 aa16.56■□□□□ 0.24
RPP40-205ENST00000479782 USP48Q86UV5 1035 aa16.56■□□□□ 0.24
RPP40-205ENST00000479782 MKL1Q969V6 931 aa16.56■□□□□ 0.24
RPP40-205ENST00000479782 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
RPP40-205ENST00000479782 RBM28Q9NW13 759 aaKnown RBP16.56■□□□□ 0.24
RPP40-205ENST00000479782 CPLX1O14810 134 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 CDKL5O76039 1030 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 RTN1Q16799 776 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 CPLX2Q6PUV4 134 aaKnown RBP16.55■□□□□ 0.24
RPP40-205ENST00000479782 FANCBQ8NB91 859 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 CTCFLQ8NI51 663 aaPredicted RBP16.55■□□□□ 0.24
RPP40-205ENST00000479782 NUP133Q8WUM0 1156 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 CDCA5Q96FF9 252 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 MYL10Q9BUA6 226 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 CLIP2Q9UDT6 1046 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 PAPPA2Q9BXP8 1791 aa16.55■□□□□ 0.24
RPP40-205ENST00000479782 PPP1R12BO60237 982 aaPredicted RBP16.54■□□□□ 0.24
RPP40-205ENST00000479782 POTEIP0CG38 1075 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 POTEJP0CG39 1038 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 EEF2P13639 858 aaKnown RBP16.54■□□□□ 0.24
RPP40-205ENST00000479782 KIF5BP33176 963 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 JAG1P78504 1218 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 SHROOM1Q2M3G4 852 aaPredicted RBP16.54■□□□□ 0.24
RPP40-205ENST00000479782 KLRG1Q96E93 195 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 WRNIP1Q96S55 665 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
RPP40-205ENST00000479782 NCOA5Q9HCD5 579 aaKnown RBP16.54■□□□□ 0.24
RPP40-205ENST00000479782 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 NMRK2Q9NPI5 230 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 SMC3Q9UQE7 1217 aa16.54■□□□□ 0.24
RPP40-205ENST00000479782 RXRAP19793 462 aa16.53■□□□□ 0.24
RPP40-205ENST00000479782 CDC27P30260 824 aa16.53■□□□□ 0.24
RPP40-205ENST00000479782 HMGN5P82970 282 aaKnown RBP16.53■□□□□ 0.24
RPP40-205ENST00000479782 ATP2B2Q01814 1243 aa16.53■□□□□ 0.24
RPP40-205ENST00000479782 NOL9Q5SY16 702 aaKnown RBP16.53■□□□□ 0.24
RPP40-205ENST00000479782 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
RPP40-205ENST00000479782 CLEC10AQ8IUN9 316 aa16.53■□□□□ 0.24
RPP40-205ENST00000479782 SCYL3Q8IZE3 742 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms