RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 CERKLQ49MI3 558 aaPredicted RBP16.2■□□□□ 0.18
ABCF1-206ENST00000479542 EDC3Q96F86 508 aaKnown RBP16.2■□□□□ 0.18
ABCF1-206ENST00000479542 PFASO15067 1338 aa16.19■□□□□ 0.18
ABCF1-206ENST00000479542 SLC15A5A6NIM6 579 aa16.19■□□□□ 0.18
ABCF1-206ENST00000479542 SOX1O00570 391 aaPredicted RBP16.19■□□□□ 0.18
ABCF1-206ENST00000479542 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
ABCF1-206ENST00000479542 IGHA2P01877 340 aa16.19■□□□□ 0.18
ABCF1-206ENST00000479542 USP5P45974 858 aa16.19■□□□□ 0.18
ABCF1-206ENST00000479542 GABPAQ06546 454 aa16.19■□□□□ 0.18
ABCF1-206ENST00000479542 TTF1Q15361 905 aaPredicted RBP16.19■□□□□ 0.18
ABCF1-206ENST00000479542 HSP90AB4PQ58FF6 505 aa16.19■□□□□ 0.18
ABCF1-206ENST00000479542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.19■□□□□ 0.18
ABCF1-206ENST00000479542 RIOK1Q9BRS2 568 aaKnown RBP16.19■□□□□ 0.18
ABCF1-206ENST00000479542 CCDC8Q9H0W5 538 aaPredicted RBP16.19■□□□□ 0.18
ABCF1-206ENST00000479542 CABP5Q9NP86 173 aa16.19■□□□□ 0.18
ABCF1-206ENST00000479542 MYO5AQ9Y4I1 1855 aaKnown RBP16.18■□□□□ 0.18
ABCF1-206ENST00000479542 STRNO43815 780 aa16.18■□□□□ 0.18
ABCF1-206ENST00000479542 CNMDO75829 334 aa16.18■□□□□ 0.18
ABCF1-206ENST00000479542 PTPREP23469 700 aa16.18■□□□□ 0.18
ABCF1-206ENST00000479542 ABCB5Q2M3G0 1257 aa16.18■□□□□ 0.18
ABCF1-206ENST00000479542 SHROOM1Q2M3G4 852 aaPredicted RBP16.18■□□□□ 0.18
ABCF1-206ENST00000479542 FTSJ3Q8IY81 847 aaKnown RBP16.18■□□□□ 0.18
ABCF1-206ENST00000479542 C7orf61Q8IZ16 206 aa16.18■□□□□ 0.18
ABCF1-206ENST00000479542 TDHQ8IZJ6 230 aa16.18■□□□□ 0.18
ABCF1-206ENST00000479542 MAGEB6Q8N7X4 407 aa16.18■□□□□ 0.18
ABCF1-206ENST00000479542 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
ABCF1-206ENST00000479542 SAP30BPQ9UHR5 308 aaKnown RBP16.18■□□□□ 0.18
ABCF1-206ENST00000479542 DDX60LQ5H9U9 1706 aaKnown RBP16.18■□□□□ 0.18
ABCF1-206ENST00000479542 MYH1P12882 1939 aa16.17■□□□□ 0.18
ABCF1-206ENST00000479542 COL6A3P12111 3177 aa16.17■□□□□ 0.18
ABCF1-206ENST00000479542 VCAM1P19320 739 aa16.17■□□□□ 0.18
ABCF1-206ENST00000479542 MFSD14CQ5VZR4 134 aa16.17■□□□□ 0.18
ABCF1-206ENST00000479542 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
ABCF1-206ENST00000479542 PAGR1Q9BTK6 254 aa16.17■□□□□ 0.18
ABCF1-206ENST00000479542 TLR7Q9NYK1 1049 aaKnown RBP16.17■□□□□ 0.18
ABCF1-206ENST00000479542 CCND3P30281 292 aaPredicted RBP16.16■□□□□ 0.18
ABCF1-206ENST00000479542 SHMT1P34896 483 aa16.16■□□□□ 0.18
ABCF1-206ENST00000479542 MAGEA10P43363 369 aaPredicted RBP16.16■□□□□ 0.18
ABCF1-206ENST00000479542 GRB14Q14449 540 aa16.16■□□□□ 0.18
ABCF1-206ENST00000479542 CCL14Q16627 93 aa16.16■□□□□ 0.18
ABCF1-206ENST00000479542 ITPRIPQ8IWB1 547 aa16.16■□□□□ 0.18
ABCF1-206ENST00000479542 MIGA1Q8NAN2 632 aa16.16■□□□□ 0.18
ABCF1-206ENST00000479542 LRCH3Q96II8 777 aa16.16■□□□□ 0.18
ABCF1-206ENST00000479542 FEZ1Q99689 392 aa16.16■□□□□ 0.18
ABCF1-206ENST00000479542 ZMYND8Q9ULU4 1186 aaPredicted RBP16.16■□□□□ 0.18
ABCF1-206ENST00000479542 SPDYE16A6NNV3 312 aaPredicted RBP16.15■□□□□ 0.18
ABCF1-206ENST00000479542 PEX10O60683 326 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 GUCY1A2P33402 732 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 PLCD1P51178 756 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 COG2Q14746 738 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 RAB3GAP1Q15042 981 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 OLFML2BQ68BL8 750 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 SLC17A8Q8NDX2 589 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 LPAR1Q92633 364 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 ANTXR1Q9H6X2 564 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 IVNS1ABPQ9Y6Y0 642 aa16.15■□□□□ 0.18
ABCF1-206ENST00000479542 RLBP1P12271 317 aa16.14■□□□□ 0.17
ABCF1-206ENST00000479542 FAM109BQ6ICB4 259 aaPredicted RBP16.14■□□□□ 0.17
ABCF1-206ENST00000479542 MB21D1Q8N884 522 aa16.14■□□□□ 0.17
ABCF1-206ENST00000479542 ACER1Q8TDN7 264 aa16.14■□□□□ 0.17
ABCF1-206ENST00000479542 CRNKL1Q9BZJ0 848 aaKnown RBP16.14■□□□□ 0.17
ABCF1-206ENST00000479542 C1orf115Q9H7X2 142 aa16.14■□□□□ 0.17
ABCF1-206ENST00000479542 CWC22Q9HCG8 908 aaKnown RBP16.14■□□□□ 0.17
ABCF1-206ENST00000479542 BTBD7Q9P203 1132 aa16.14■□□□□ 0.17
ABCF1-206ENST00000479542 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
ABCF1-206ENST00000479542 DDX20Q9UHI6 824 aaKnown RBP16.14■□□□□ 0.17
ABCF1-206ENST00000479542 MAGEB6P1A0A0J9YX57 407 aa16.13■□□□□ 0.17
ABCF1-206ENST00000479542 MS4A1P11836 297 aa16.13■□□□□ 0.17
ABCF1-206ENST00000479542 ATP2B2Q01814 1243 aa16.13■□□□□ 0.17
ABCF1-206ENST00000479542 LRRC26Q2I0M4 334 aa16.13■□□□□ 0.17
ABCF1-206ENST00000479542 AACSQ86V21 672 aa16.13■□□□□ 0.17
ABCF1-206ENST00000479542 RPAP2Q8IXW5 612 aaPredicted RBP16.13■□□□□ 0.17
ABCF1-206ENST00000479542 ABRAQ8N0Z2 381 aa16.13■□□□□ 0.17
ABCF1-206ENST00000479542 RHPN1Q8TCX5 695 aa16.13■□□□□ 0.17
ABCF1-206ENST00000479542 UBE2OQ9C0C9 1292 aaKnown RBP16.13■□□□□ 0.17
ABCF1-206ENST00000479542 STXBP5LQ9Y2K9 1186 aa16.13■□□□□ 0.17
ABCF1-206ENST00000479542 DNM1LO00429 736 aa16.12■□□□□ 0.17
ABCF1-206ENST00000479542 POLR3DP05423 398 aaPredicted RBP16.12■□□□□ 0.17
ABCF1-206ENST00000479542 SYN1P17600 705 aa16.12■□□□□ 0.17
ABCF1-206ENST00000479542 SLC9C2Q5TAH2 1124 aa16.12■□□□□ 0.17
ABCF1-206ENST00000479542 CLASRPQ8N2M8 674 aaKnown RBP16.12■□□□□ 0.17
ABCF1-206ENST00000479542 DEFB123Q8N688 67 aa16.12■□□□□ 0.17
ABCF1-206ENST00000479542 KIF1BPQ96EK5 621 aa16.12■□□□□ 0.17
ABCF1-206ENST00000479542 RPAP3Q9H6T3 665 aaPredicted RBP16.12■□□□□ 0.17
ABCF1-206ENST00000479542 MTMR10Q9NXD2 777 aa16.12■□□□□ 0.17
ABCF1-206ENST00000479542 FLRT1Q9NZU1 646 aa16.12■□□□□ 0.17
ABCF1-206ENST00000479542 TCRBV5S4A2TA0A5A2 114 aa16.11■□□□□ 0.17
ABCF1-206ENST00000479542 PDE6AP16499 860 aa16.11■□□□□ 0.17
ABCF1-206ENST00000479542 TMEM179Q6ZVK1 233 aa16.11■□□□□ 0.17
ABCF1-206ENST00000479542 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
ABCF1-206ENST00000479542 DCP1AQ9NPI6 582 aaPredicted RBP16.11■□□□□ 0.17
ABCF1-206ENST00000479542 ATP8A2Q9NTI2 1148 aa16.11■□□□□ 0.17
ABCF1-206ENST00000479542 SLC5A4Q9NY91 659 aa16.11■□□□□ 0.17
ABCF1-206ENST00000479542 ZNF236Q9UL36 1845 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 POTEB2H3BUK9 544 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 CYBAP13498 195 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 SEPT2Q15019 361 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 ZYXQ15942 572 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms