RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MASTLQ96GX5 879 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 FHDC1Q9C0D6 1143 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-209ENST00000479532 ZNF358Q9NW07 568 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 CXXC1Q9P0U4 656 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-209ENST00000479532 CHMP3Q9Y3E7 222 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 ABCC12Q96J65 1359 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 TNRC6CQ9HCJ0 1690 aaKnown RBP7.67□□□□□ -1.18
SF3B1-209ENST00000479532 CACNA1SQ13698 1873 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 TMEM229AB2RXF0 380 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 STAU1O95793 577 aaKnown RBP7.67□□□□□ -1.18
SF3B1-209ENST00000479532 GNAI2P04899 355 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 HCLS1P14317 486 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-209ENST00000479532 FOXD4L6Q3SYB3 417 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-209ENST00000479532 STYK1Q6J9G0 422 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 FOXD4L3Q6VB84 417 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-209ENST00000479532 PANK1Q8TE04 598 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 CNKSR1Q969H4 720 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 PKNOX2Q96KN3 472 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 PLA2G12BQ9BX93 195 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 PIM2Q9P1W9 311 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 UTYO14607 1347 aa7.67□□□□□ -1.18
SF3B1-209ENST00000479532 COL11A2P13942 1736 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-209ENST00000479532 ANKRD18BA2A2Z9 1011 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 M0R2N6 131 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 F11P03951 625 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 NBPF7P0C2Y1 421 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-209ENST00000479532 SRGNP10124 158 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 DPEP1P16444 411 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 GPC1P35052 558 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 SERPINB4P48594 390 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 SCNN1DP51172 638 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 SF3B3Q15393 1217 aaKnown RBP7.66□□□□□ -1.18
SF3B1-209ENST00000479532 CCDC57Q2TAC2 916 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 TAF7LQ5H9L4 462 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 TTLL6Q8N841 843 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 C1orf216Q8TAB5 229 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 JARID2Q92833 1246 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-209ENST00000479532 CDC5LQ99459 802 aaKnown RBP7.66□□□□□ -1.18
SF3B1-209ENST00000479532 SYT17Q9BSW7 474 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 USP44Q9H0E7 712 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 TIMMDC1Q9NPL8 285 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 TNNQ9UQP3 1299 aa7.66□□□□□ -1.18
SF3B1-209ENST00000479532 A0A0G2JLW4 131 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 KLRG2A4D1S0 409 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-209ENST00000479532 COBLO75128 1261 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 NEFLP07196 543 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 RLBP1P12271 317 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 CHRNA5P30532 468 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 BRCA1P38398 1863 aaKnown RBP7.65□□□□□ -1.18
SF3B1-209ENST00000479532 IGHMBP2P38935 993 aaKnown RBP7.65□□□□□ -1.18
SF3B1-209ENST00000479532 GDF10P55107 478 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 CASP7P55210 303 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 IFIT5Q13325 482 aaKnown RBP7.65□□□□□ -1.18
SF3B1-209ENST00000479532 AAMPQ13685 434 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 CRY2Q49AN0 593 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 DALRD3Q5D0E6 543 aaKnown RBP7.65□□□□□ -1.18
SF3B1-209ENST00000479532 SOGA3Q5TF21 947 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 TMC4Q7Z404 712 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 CYP2U1Q7Z449 544 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 ANKRD18AQ8IVF6 992 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 SYNE4Q8N205 404 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 RGS22Q8NE09 1264 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 SUCLG2Q96I99 432 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 BTBD6Q96KE9 485 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 CRAMP1Q96RY5 1269 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 MEIS3Q99687 375 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 KIAA1551Q9HCM1 1747 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 MTMR7Q9Y216 660 aa7.65□□□□□ -1.18
SF3B1-209ENST00000479532 RTL9Q8NET4 1388 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 BBOX1O75936 387 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 BMP4P12644 408 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 HOXA10P31260 410 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-209ENST00000479532 GRAPQ13588 217 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 LMBR1LQ6UX01 489 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 TAS1R3Q7RTX0 852 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 NLGN2Q8NFZ4 835 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 TTLL11Q8NHH1 800 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 GRAPLQ8TC17 118 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-209ENST00000479532 MPHOSPH8Q99549 860 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 BICC1Q9H694 974 aaKnown RBP7.64□□□□□ -1.19
SF3B1-209ENST00000479532 ETNK1Q9HBU6 452 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 BCS1LQ9Y276 419 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 LRRFIP2Q9Y608 721 aaKnown RBP7.64□□□□□ -1.19
SF3B1-209ENST00000479532 SPEF2Q9C093 1822 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 ARFGEF1Q9Y6D6 1849 aa7.64□□□□□ -1.19
SF3B1-209ENST00000479532 BACH1O14867 736 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 HMMRO75330 724 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 CSF1RP07333 972 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 HOXB4P17483 251 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-209ENST00000479532 WEE1P30291 646 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 FOXO4P98177 505 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 GPR162Q16538 588 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 RSPO4Q2I0M5 234 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-209ENST00000479532 RABL6Q3YEC7 729 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-209ENST00000479532 C20orf194Q5TEA3 1177 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 PRPF40BQ6NWY9 871 aaKnown RBP7.63□□□□□ -1.19
SF3B1-209ENST00000479532 TNS4Q8IZW8 715 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 MKNK1Q9BUB5 465 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 GREM2Q9H772 168 aa7.63□□□□□ -1.19
SF3B1-209ENST00000479532 SERTAD1Q9UHV2 236 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms