RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CAVIN4Q5BKX8 364 aa28.07■■■□□ 2.08
SYNGAP1-206ENST00000479510 PYM1Q9BRP8 204 aaKnown RBP28.07■■■□□ 2.08
SYNGAP1-206ENST00000479510 BSDC1Q9NW68 430 aaPredicted RBP28.07■■■□□ 2.08
SYNGAP1-206ENST00000479510 ABCF2Q9UG63 623 aa28.07■■■□□ 2.08
SYNGAP1-206ENST00000479510 CACNA1SQ13698 1873 aa28.07■■■□□ 2.08
SYNGAP1-206ENST00000479510 PDS5AQ29RF7 1337 aaKnown RBP28.07■■■□□ 2.08
SYNGAP1-206ENST00000479510 GSDMAQ96QA5 445 aa28.07■■■□□ 2.08
SYNGAP1-206ENST00000479510 SPATA1Q5VX52 437 aa28.06■■■□□ 2.08
SYNGAP1-206ENST00000479510 VWA3AA6NCI4 1184 aa28.06■■■□□ 2.08
SYNGAP1-206ENST00000479510 TROAPQ12815 778 aa28.06■■■□□ 2.08
SYNGAP1-206ENST00000479510 DDB1Q16531 1140 aa28.06■■■□□ 2.08
SYNGAP1-206ENST00000479510 ERCC6LQ2NKX8 1250 aa28.06■■■□□ 2.08
SYNGAP1-206ENST00000479510 PANX2Q96RD6 677 aa28.06■■■□□ 2.08
SYNGAP1-206ENST00000479510 A0A1B0GUL6 1792 aa28.05■■■□□ 2.08
SYNGAP1-206ENST00000479510 ITPK1Q13572 414 aa28.05■■■□□ 2.08
SYNGAP1-206ENST00000479510 VPS54Q9P1Q0 977 aa28.05■■■□□ 2.08
SYNGAP1-206ENST00000479510 COL1A1P02452 1464 aaPredicted RBP28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 ORC4O43929 436 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 TMTC3Q6ZXV5 915 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 PDILTQ8N807 584 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 SMARCC1Q92922 1105 aaPredicted RBP28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 TNFRSF25Q93038 417 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 SHISA4Q96DD7 197 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 MED15Q96RN5 788 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 CTAGE1Q96RT6 745 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 EFCAB8A8MWE9 144 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 TRAPPC10P48553 1259 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 NT5C2P49902 561 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 FAM193AP78312 1265 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 USP49Q70CQ1 688 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 PAGE5Q96GU1 130 aa28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 NAA15Q9BXJ9 866 aaKnown RBP28.04■■■□□ 2.08
SYNGAP1-206ENST00000479510 ATP2B1P20020 1258 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 GYG1P46976 350 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 BMS1Q14692 1282 aaKnown RBP28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 GRAMD1CQ8IYS0 662 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 MNS1Q8NEH6 495 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 UBXN4Q92575 508 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 PARP3Q9Y6F1 533 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 V9GY48 417 aaPredicted RBP28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 SPATA31A1Q5TZJ5 1347 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 SCN7AQ01118 1682 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 CUL4BQ13620 913 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 ZNF827Q17R98 1081 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 DHX58Q96C10 678 aa28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 ARGLU1Q9NWB6 273 aaPredicted RBP28.03■■■□□ 2.08
SYNGAP1-206ENST00000479510 AHDC1Q5TGY3 1603 aaPredicted RBP28.02■■■□□ 2.08
SYNGAP1-206ENST00000479510 ZBTB22O15209 634 aa28.02■■■□□ 2.08
SYNGAP1-206ENST00000479510 TRMT44Q8IYL2 757 aaKnown RBP28.02■■■□□ 2.08
SYNGAP1-206ENST00000479510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.02■■■□□ 2.08
SYNGAP1-206ENST00000479510 MYH14Q7Z406 1995 aaKnown RBP28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 TADA3O75528 432 aa28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 DPYDQ12882 1025 aa28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 SAMSN1Q9NSI8 373 aaKnown RBP28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 ATP2C1P98194 919 aaPredicted RBP28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 ARHGAP29Q52LW3 1261 aa28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 CDKAL1Q5VV42 579 aa28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 CTR9Q6PD62 1173 aa28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 APTXQ7Z2E3 356 aaKnown RBP28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 SYMPKQ92797 1274 aaKnown RBP28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 IQSEC3Q9UPP2 1182 aaPredicted RBP28.01■■■□□ 2.07
SYNGAP1-206ENST00000479510 SYNRGQ9UMZ2 1314 aa28■■■□□ 2.07
SYNGAP1-206ENST00000479510 AKR1B15C9JRZ8 316 aaPredicted RBP28■■■□□ 2.07
SYNGAP1-206ENST00000479510 URI1O94763 535 aaPredicted RBP28■■■□□ 2.07
SYNGAP1-206ENST00000479510 PLEKHA8P1O95397 391 aa28■■■□□ 2.07
SYNGAP1-206ENST00000479510 GOLGA8FQ08AF8 430 aa28■■■□□ 2.07
SYNGAP1-206ENST00000479510 GOLGA8DPQ0D2H9 430 aa28■■■□□ 2.07
SYNGAP1-206ENST00000479510 TTC38Q5R3I4 469 aa28■■■□□ 2.07
SYNGAP1-206ENST00000479510 FBXO33Q7Z6M2 555 aa28■■■□□ 2.07
SYNGAP1-206ENST00000479510 ZNF831Q5JPB2 1677 aa28■■■□□ 2.07
SYNGAP1-206ENST00000479510 CASQ1P31415 396 aa27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 EPSTI1Q96J88 318 aa27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 FAM84BQ96KN1 310 aaPredicted RBP27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 ZNF446Q9NWS9 450 aa27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 CNTNAP5Q8WYK1 1306 aa27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 A0A087X0B3 334 aa27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 NPY5RQ15761 445 aa27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 SLC10A5Q5PT55 438 aa27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 CREBRFQ8IUR6 639 aa27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 CTCFLQ8NI51 663 aaPredicted RBP27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 MINPP1Q9UNW1 487 aa27.99■■■□□ 2.07
SYNGAP1-206ENST00000479510 FAM205CA6NFA0 338 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 PBX1P40424 430 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 DYNLL1P63167 89 aaKnown RBP27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 MAP3K9P80192 1104 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 FILIP1LQ4L180 1135 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 EARS2Q5JPH6 523 aaKnown RBP27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 LRRN4CLQ8ND94 238 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 ATP8A2Q9NTI2 1148 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 FANCGO15287 622 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 IGSF3O75054 1194 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 CCDC51Q96ER9 411 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 ADD3Q9UEY8 706 aaKnown RBP27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 MYH2Q9UKX2 1941 aa27.98■■■□□ 2.07
SYNGAP1-206ENST00000479510 COL4A1P02462 1669 aa27.97■■■□□ 2.07
SYNGAP1-206ENST00000479510 ADKP55263 362 aaKnown RBP27.97■■■□□ 2.07
SYNGAP1-206ENST00000479510 ERFEQ4G0M1 354 aa27.97■■■□□ 2.07
SYNGAP1-206ENST00000479510 HSP90AA4PQ58FG1 418 aa27.97■■■□□ 2.07
SYNGAP1-206ENST00000479510 IQUBQ8NA54 791 aa27.97■■■□□ 2.07
SYNGAP1-206ENST00000479510 MARCH10Q8NA82 808 aaPredicted RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms