RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 ZNF654Q8IZM8 581 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 KRT23Q9C075 422 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 COL4A1P02462 1669 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 TNKSO95271 1327 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 C4BP0C0L5 1744 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 MAGEB6P1A0A0J9YX57 407 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 POLR2DO15514 142 aaKnown RBP16.06■□□□□ 0.16
CCDC78-210ENST00000478979 NMT2O60551 498 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 TTC31Q49AM3 519 aaPredicted RBP16.06■□□□□ 0.16
CCDC78-210ENST00000478979 METTL16Q86W50 562 aaKnown RBP16.06■□□□□ 0.16
CCDC78-210ENST00000478979 JMYQ8N9B5 988 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 CELF1Q92879 486 aaKnown RBP16.06■□□□□ 0.16
CCDC78-210ENST00000478979 PCDHA5Q9Y5H7 936 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 MRFAP1Q9Y605 127 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 ZSCAN12O43309 604 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 IVLP07476 585 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 TOB1P50616 345 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-210ENST00000478979 FAM98CQ17RN3 349 aaKnown RBP16.05■□□□□ 0.16
CCDC78-210ENST00000478979 FOXP4Q8IVH2 680 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-210ENST00000478979 RABGGTAQ92696 567 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 JRKLQ9Y4A0 524 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 TMEM232C9JQI7 657 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 SGMS1Q86VZ5 419 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 ANKRD18AQ8IVF6 992 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 CNNM2Q9H8M5 875 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 PPP2R2CQ9Y2T4 447 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 DISP2A7MBM2 1401 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 MYH14Q7Z406 1995 aaKnown RBP16.05■□□□□ 0.16
CCDC78-210ENST00000478979 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 FMNL1O95466 1100 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-210ENST00000478979 PDE4BQ07343 736 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
CCDC78-210ENST00000478979 FAM47AQ5JRC9 791 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 PDE11AQ9HCR9 933 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 FANCLQ9NW38 375 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 SRP68Q9UHB9 627 aaKnown RBP16.05■□□□□ 0.16
CCDC78-210ENST00000478979 ATRNO75882 1429 aa16.05■□□□□ 0.16
CCDC78-210ENST00000478979 WDR19Q8NEZ3 1342 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 MAP2K7O14733 419 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 COBLO75128 1261 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 MMP1P03956 469 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 FANCBQ8NB91 859 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 STAMQ92783 540 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 GOLGA1Q92805 767 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 SERTAD1Q9UHV2 236 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 DOT1LQ8TEK3 1739 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 PLEKHA8P1O95397 391 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 LIFRP42702 1097 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 MAGEA9P43362 315 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 UBASH3AP57075 661 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 AKAP17AQ02040 695 aaKnown RBP16.04■□□□□ 0.16
CCDC78-210ENST00000478979 MCM6Q14566 821 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 AATFQ9NY61 560 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC78-210ENST00000478979 EP400Q96L91 3159 aa16.04■□□□□ 0.16
CCDC78-210ENST00000478979 CCDC151A5D8V7 595 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 GUCY2CP25092 1073 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 AFMP43652 599 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 KRI1Q8N9T8 703 aaKnown RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 ZSWIM4Q9H7M6 989 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 V9GY48 417 aaPredicted RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 IFNAR1P17181 557 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 TXLNAP40222 546 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 EARS2Q5JPH6 523 aaKnown RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 KLHL10Q6JEL2 608 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 DHX58Q96C10 678 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 CDC5LQ99459 802 aaKnown RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 HSD3B7Q9H2F3 369 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 BAZ2AQ9UIF9 1905 aaKnown RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 EIF3CLB5ME19 914 aaKnown RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 CHRM1P11229 460 aaPredicted RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 RESP18Q5W5W9 173 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 OLFM4Q6UX06 510 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 FCHSD1Q86WN1 690 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 CRACR2BQ8N4Y2 399 aaPredicted RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 STAG1Q8WVM7 1258 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 DRC1Q96MC2 740 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 EIF3CQ99613 913 aaKnown RBP16.03■□□□□ 0.16
CCDC78-210ENST00000478979 BRMS1Q9HCU9 246 aa16.03■□□□□ 0.16
CCDC78-210ENST00000478979 MYH2Q9UKX2 1941 aa16.02■□□□□ 0.16
CCDC78-210ENST00000478979 ALX1Q15699 326 aa16.02■□□□□ 0.16
CCDC78-210ENST00000478979 USP17L12C9JPN9 530 aa16.02■□□□□ 0.15
CCDC78-210ENST00000478979 USP17L21D6R901 530 aa16.02■□□□□ 0.15
CCDC78-210ENST00000478979 CYP2D6P10635 497 aa16.02■□□□□ 0.15
CCDC78-210ENST00000478979 PARP10Q53GL7 1025 aa16.02■□□□□ 0.15
CCDC78-210ENST00000478979 JAKMIP3Q5VZ66 844 aa16.02■□□□□ 0.15
CCDC78-210ENST00000478979 TMEM139Q8IV31 216 aa16.02■□□□□ 0.15
CCDC78-210ENST00000478979 LINC00116Q8NCU8 138 aa16.02■□□□□ 0.15
CCDC78-210ENST00000478979 SPATA31A1Q5TZJ5 1347 aa16.02■□□□□ 0.15
CCDC78-210ENST00000478979 CHD4Q14839 1912 aa16.01■□□□□ 0.15
CCDC78-210ENST00000478979 ARHGAP6O43182 974 aa16.01■□□□□ 0.15
CCDC78-210ENST00000478979 N4BP1O75113 896 aaKnown RBP16.01■□□□□ 0.15
CCDC78-210ENST00000478979 PPP6R2O75170 966 aa16.01■□□□□ 0.15
CCDC78-210ENST00000478979 BMP6P22004 513 aa16.01■□□□□ 0.15
CCDC78-210ENST00000478979 BRD3Q15059 726 aa16.01■□□□□ 0.15
CCDC78-210ENST00000478979 CAVIN4Q5BKX8 364 aa16.01■□□□□ 0.15
CCDC78-210ENST00000478979 IFIT1BQ5T764 474 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms