RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 IRX6P78412 446 aaPredicted RBP9.46□□□□□ -0.9
DDX39B-218ENST00000478365 IRX3P78415 501 aaPredicted RBP9.46□□□□□ -0.9
DDX39B-218ENST00000478365 DGKZQ13574 1117 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 ALX1Q15699 326 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 CTR9Q6PD62 1173 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 SMCR8Q8TEV9 937 aaPredicted RBP9.46□□□□□ -0.9
DDX39B-218ENST00000478365 RUFY2Q8WXA3 655 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 RILPL2Q969X0 211 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 C12orf42Q96LP6 360 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 ARHGEF10LQ9HCE6 1279 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 SYNPO2Q9UMS6 1093 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 RAD50Q92878 1312 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 M0R2C6 588 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 MPHOSPH10O00566 681 aaKnown RBP9.45□□□□□ -0.9
DDX39B-218ENST00000478365 HOXD10P28358 340 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 HOXA7P31268 230 aaPredicted RBP9.45□□□□□ -0.9
DDX39B-218ENST00000478365 CDK8P49336 464 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 HMGCS2P54868 508 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 MTMR2Q13614 643 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 MOGSQ13724 837 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 RAB3GAP1Q15042 981 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 TTC22Q5TAA0 569 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 GPAT2Q6NUI2 795 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 IFNL3Q8IZI9 196 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 LPAR1Q92633 364 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 KANSL2Q9H9L4 492 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 MKNK2Q9HBH9 465 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 CCDC171Q6TFL3 1326 aa9.45□□□□□ -0.9
DDX39B-218ENST00000478365 SDSP20132 328 aa9.44□□□□□ -0.9
DDX39B-218ENST00000478365 ICA1Q05084 483 aa9.44□□□□□ -0.9
DDX39B-218ENST00000478365 RRP1BQ14684 758 aaKnown RBP9.44□□□□□ -0.9
DDX39B-218ENST00000478365 FAM110CQ1W6H9 321 aa9.44□□□□□ -0.9
DDX39B-218ENST00000478365 SLC4A8Q2Y0W8 1093 aa9.44□□□□□ -0.9
DDX39B-218ENST00000478365 FBXO46Q6PJ61 603 aaPredicted RBP9.44□□□□□ -0.9
DDX39B-218ENST00000478365 C17orf99Q6UX52 265 aa9.44□□□□□ -0.9
DDX39B-218ENST00000478365 ZNF444Q8N0Y2 327 aaPredicted RBP9.44□□□□□ -0.9
DDX39B-218ENST00000478365 MCOLN1Q9GZU1 580 aa9.44□□□□□ -0.9
DDX39B-218ENST00000478365 EFCC1Q9HA90 598 aa9.44□□□□□ -0.9
DDX39B-218ENST00000478365 ADGRA2Q96PE1 1338 aa9.44□□□□□ -0.9
DDX39B-218ENST00000478365 PLIN4Q96Q06 1357 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 MINDY4BA8MYZ0 360 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 CYP2D6P10635 497 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 FCGRTP55899 365 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 LACTBP83111 547 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-218ENST00000478365 PPARAQ07869 468 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 USP17L24Q0WX57 530 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 SLFNL1Q499Z3 407 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 CCDC136Q96JN2 1154 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 RNF41Q9H4P4 317 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-218ENST00000478365 EPB41L4AQ9HCS5 686 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-218ENST00000478365 GOPCQ9HD26 462 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 CTNNA3Q9UI47 895 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 ANAPC4Q9UJX5 808 aa9.43□□□□□ -0.9
DDX39B-218ENST00000478365 MYPNQ86TC9 1320 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 A0A0D9SFI3 127 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 CHGBP05060 677 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 SLURP2P0DP57 97 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 BCRP11274 1271 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 CCNA1P78396 465 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 NMIQ13287 307 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-218ENST00000478365 SEPT2Q15019 361 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 SLC44A5Q8NCS7 719 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 DYNLL2Q96FJ2 89 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 ABHD8Q96I13 439 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 DSCC1Q9BVC3 393 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 ASCC2Q9H1I8 757 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-218ENST00000478365 NYAP2Q9P242 653 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 TMX2Q9Y320 296 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 TRIM17Q9Y577 477 aa9.42□□□□□ -0.9
DDX39B-218ENST00000478365 GREB1LQ9C091 1923 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-218ENST00000478365 WDR46O15213 610 aaKnown RBP9.41□□□□□ -0.9
DDX39B-218ENST00000478365 ORC4O43929 436 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 TSPY3P0CV98 308 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 TSPY8P0CW00 308 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 HSPD1P10809 573 aaKnown RBP9.41□□□□□ -0.9
DDX39B-218ENST00000478365 AKR1B1P15121 316 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 VCAM1P19320 739 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 RASA1P20936 1047 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 PDE4AP27815 886 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 GUCY1A2P33402 732 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 CCDC178Q5BJE1 867 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 TREML2Q5T2D2 321 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 CASC1Q6TDU7 716 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 LBX2Q6XYB7 198 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 OTOP1Q7RTM1 612 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 NBPF11Q86T75 865 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 CCDC84Q86UT8 332 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-218ENST00000478365 MB21D1Q8N884 522 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 CD99L2Q8TCZ2 262 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 FAM227BQ96M60 508 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 SEC62Q99442 399 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms