RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 MFSD6Q6ZSS7 791 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 STK11IPQ8N1F8 1099 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 PROCA1Q8NCQ7 364 aaPredicted RBP15.56■□□□□ 0.08
TOP3A-205ENST00000477508 MAP4K1Q92918 833 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 SH2D4AQ9H788 454 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.56■□□□□ 0.08
TOP3A-205ENST00000477508 PHIPQ8WWQ0 1821 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 EIF5BO60841 1220 aaKnown RBP15.55■□□□□ 0.08
TOP3A-205ENST00000477508 TSPY3P0CV98 308 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 TSPY8P0CW00 308 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 CTDSPL2Q05D32 466 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 ANKRD23Q86SG2 305 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 STAG1Q8WVM7 1258 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 FEZ1Q99689 392 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 CFHR5Q9BXR6 569 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 KIAA1683Q9H0B3 1180 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 ARHGEF10LQ9HCE6 1279 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 RNF186Q9NXI6 227 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 TMOD4Q9NZQ9 345 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.55■□□□□ 0.08
TOP3A-205ENST00000477508 SLC45A1Q9Y2W3 748 aa15.55■□□□□ 0.08
TOP3A-205ENST00000477508 PRDM1O75626 825 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 HSPA1AP0DMV8 641 aaKnown RBP15.54■□□□□ 0.08
TOP3A-205ENST00000477508 HSPA1BP0DMV9 641 aaKnown RBP15.54■□□□□ 0.08
TOP3A-205ENST00000477508 GUCY1A2P33402 732 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 HAND2P61296 217 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 PTH1RQ03431 593 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 ICA1Q05084 483 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.08
TOP3A-205ENST00000477508 SHROOM1Q2M3G4 852 aaPredicted RBP15.54■□□□□ 0.08
TOP3A-205ENST00000477508 USP17L2Q6R6M4 530 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 CCDC84Q86UT8 332 aaPredicted RBP15.54■□□□□ 0.08
TOP3A-205ENST00000477508 NEDD1Q8NHV4 660 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 PTPN18Q99952 460 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 CNNM2Q9H8M5 875 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 ANO2Q9NQ90 1003 aa15.54■□□□□ 0.08
TOP3A-205ENST00000477508 PLIN4Q96Q06 1357 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 LAMA4Q16363 1823 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 TSPY2A6NKD2 308 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 BTBD19C9JJ37 291 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 IGF2BP3O00425 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
TOP3A-205ENST00000477508 RANBP6O60518 1105 aaKnown RBP15.53■□□□□ 0.08
TOP3A-205ENST00000477508 TRPA1O75762 1119 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 TFAP4Q01664 338 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 MTMR2Q13614 643 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 MOGSQ13724 837 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 GADL1Q6ZQY3 521 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 ESR2Q92731 530 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 LSG1Q9H089 658 aaKnown RBP15.53■□□□□ 0.08
TOP3A-205ENST00000477508 TOMM22Q9NS69 142 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 SYNPO2Q9UMS6 1093 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 AGTPBP1Q9UPW5 1226 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 PTPRFP10586 1907 aa15.53■□□□□ 0.08
TOP3A-205ENST00000477508 REC8O95072 547 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 CTCFP49711 727 aaPredicted RBP15.52■□□□□ 0.08
TOP3A-205ENST00000477508 HMGCS2P54868 508 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 TRDNQ13061 729 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 NOM1Q5C9Z4 860 aaKnown RBP15.52■□□□□ 0.08
TOP3A-205ENST00000477508 RNF20Q5VTR2 975 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 C12orf42Q96LP6 360 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.52■□□□□ 0.08
TOP3A-205ENST00000477508 KRT23Q9C075 422 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 ZFYVE28Q9HCC9 887 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 NYAP2Q9P242 653 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 PNMA3Q9UL41 463 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 TMX2Q9Y320 296 aa15.52■□□□□ 0.08
TOP3A-205ENST00000477508 RBM8AQ9Y5S9 174 aaKnown RBP15.52■□□□□ 0.08
TOP3A-205ENST00000477508 IGKV6D-41A0A0C4DH26 115 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 PDHXO00330 501 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 EPB41L2O43491 1005 aaKnown RBP15.51■□□□□ 0.07
TOP3A-205ENST00000477508 TTLL1O95922 423 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 EEF2P13639 858 aaKnown RBP15.51■□□□□ 0.07
TOP3A-205ENST00000477508 CCDC178Q5BJE1 867 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 RRP12Q5JTH9 1297 aaKnown RBP15.51■□□□□ 0.07
TOP3A-205ENST00000477508 GPAT2Q6NUI2 795 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 TBC1D10CQ8IV04 446 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 FAM43AQ8N2R8 423 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 ACER1Q8TDN7 264 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 LPAR1Q92633 364 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 NBPF3Q9H094 633 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 TCP11L1Q9NUJ3 509 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 MTMR4Q9NYA4 1195 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 GTF3C3Q9Y5Q9 886 aa15.51■□□□□ 0.07
TOP3A-205ENST00000477508 CAPN15O75808 1086 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 CYP21A2P08686 494 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 OSBPP22059 807 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 HOXA7P31268 230 aaPredicted RBP15.5■□□□□ 0.07
TOP3A-205ENST00000477508 ATP2B2Q01814 1243 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 TAF1CQ15572 869 aaPredicted RBP15.5■□□□□ 0.07
TOP3A-205ENST00000477508 FAM47AQ5JRC9 791 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 SIAH1Q8IUQ4 282 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 MKL1Q969V6 931 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 CEP95Q96GE4 821 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 PARK7Q99497 189 aaKnown RBP15.5■□□□□ 0.07
TOP3A-205ENST00000477508 GOPCQ9HD26 462 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 INCENPQ9NQS7 918 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 EMILIN3Q9NT22 766 aa15.5■□□□□ 0.07
TOP3A-205ENST00000477508 GREB1LQ9C091 1923 aaPredicted RBP15.5■□□□□ 0.07
TOP3A-205ENST00000477508 A0A1W2PRG0 241 aa15.49■□□□□ 0.07
TOP3A-205ENST00000477508 FOXN1O15353 648 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms