RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PDIA4P13667 645 aaKnown RBP16.84■□□□□ 0.29
COL4A6-206ENST00000477085 RESTQ13127 1097 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 ZSCAN29Q8IWY8 852 aaPredicted RBP16.84■□□□□ 0.29
COL4A6-206ENST00000477085 CDAN1Q8IWY9 1227 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 LMBRD1Q9NUN5 540 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 DDX11L8A8MPP1 907 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 CDKL5O76039 1030 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 RPS12P25398 132 aaKnown RBP16.84■□□□□ 0.29
COL4A6-206ENST00000477085 EIF6P56537 245 aaKnown RBP16.84■□□□□ 0.29
COL4A6-206ENST00000477085 PNMA1Q8ND90 353 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 SLC26A6Q9BXS9 759 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 STX8Q9UNK0 236 aa16.84■□□□□ 0.29
COL4A6-206ENST00000477085 H3BQV1 296 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 LMNB1P20700 586 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 DNM1Q05193 864 aaKnown RBP16.83■□□□□ 0.28
COL4A6-206ENST00000477085 RRP1BQ14684 758 aaKnown RBP16.83■□□□□ 0.28
COL4A6-206ENST00000477085 IFFO2Q5TF58 517 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 TATDN1Q6P1N9 297 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 RASGRP2Q7LDG7 609 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 CLEC10AQ8IUN9 316 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 MICALL2Q8IY33 904 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 SRBD1Q8N5C6 995 aaKnown RBP16.83■□□□□ 0.28
COL4A6-206ENST00000477085 GDPD2Q9HCC8 539 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 MTMR4Q9NYA4 1195 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 PGAP2Q9UHJ9 254 aa16.83■□□□□ 0.28
COL4A6-206ENST00000477085 SCAF8Q9UPN6 1271 aaKnown RBP16.83■□□□□ 0.28
COL4A6-206ENST00000477085 STK36Q9NRP7 1315 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 CCDC196A0A1B0GTZ2 297 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 CALM1P0DP23 149 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 CALM2P0DP24 149 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 CALM3P0DP25 149 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 JAG1P78504 1218 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
COL4A6-206ENST00000477085 PPP2R5BQ15173 497 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 CCDC178Q5BJE1 867 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 RBM26Q5T8P6 1007 aaKnown RBP16.82■□□□□ 0.28
COL4A6-206ENST00000477085 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
COL4A6-206ENST00000477085 SAMD7Q7Z3H4 446 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 FOXP4Q8IVH2 680 aaPredicted RBP16.82■□□□□ 0.28
COL4A6-206ENST00000477085 FBXO18Q8NFZ0 1043 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 FAM151AQ8WW52 585 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 DPF2Q92785 391 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 ALG1Q9BT22 464 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 CNOT7Q9UIV1 285 aaKnown RBP16.82■□□□□ 0.28
COL4A6-206ENST00000477085 CNPY2Q9Y2B0 182 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 COL2A1P02458 1487 aaPredicted RBP16.82■□□□□ 0.28
COL4A6-206ENST00000477085 ASTN2O75129 1339 aaPredicted RBP16.82■□□□□ 0.28
COL4A6-206ENST00000477085 PRPF40AO75400 957 aaKnown RBP16.82■□□□□ 0.28
COL4A6-206ENST00000477085 FKBP1CQ5VVH2 108 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 TMTC3Q6ZXV5 915 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 STAG2Q8N3U4 1231 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 SHISA4Q96DD7 197 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 C8orf76Q96K31 380 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 TMEM39BQ9GZU3 492 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 VEZTQ9HBM0 779 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 KIF3AQ9Y496 699 aa16.82■□□□□ 0.28
COL4A6-206ENST00000477085 SLC35G1Q2M3R5 365 aa16.81■□□□□ 0.28
COL4A6-206ENST00000477085 CSRNP1Q96S65 589 aa16.81■□□□□ 0.28
COL4A6-206ENST00000477085 RBM28Q9NW13 759 aaKnown RBP16.81■□□□□ 0.28
COL4A6-206ENST00000477085 TMOD2Q9NZR1 351 aa16.81■□□□□ 0.28
COL4A6-206ENST00000477085 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
COL4A6-206ENST00000477085 hCG_1642624A0A1W2PR95 340 aa16.8■□□□□ 0.28
COL4A6-206ENST00000477085 TRAK2O60296 914 aa16.8■□□□□ 0.28
COL4A6-206ENST00000477085 GRM4Q14833 912 aa16.8■□□□□ 0.28
COL4A6-206ENST00000477085 PKN1Q16512 942 aa16.8■□□□□ 0.28
COL4A6-206ENST00000477085 TBC1D10BQ4KMP7 808 aaPredicted RBP16.8■□□□□ 0.28
COL4A6-206ENST00000477085 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
COL4A6-206ENST00000477085 TOP1P11387 765 aaKnown RBP16.79■□□□□ 0.28
COL4A6-206ENST00000477085 MMP14P50281 582 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 CERKLQ49MI3 558 aaPredicted RBP16.79■□□□□ 0.28
COL4A6-206ENST00000477085 USP48Q86UV5 1035 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 SIAH1Q8IUQ4 282 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 CTCFLQ8NI51 663 aaPredicted RBP16.79■□□□□ 0.28
COL4A6-206ENST00000477085 V9GY48 417 aaPredicted RBP16.79■□□□□ 0.28
COL4A6-206ENST00000477085 KIF28PB7ZC32 967 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 VEGFAP15692 232 aaPredicted RBP16.79■□□□□ 0.28
COL4A6-206ENST00000477085 KRT40Q6A162 431 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 FAM83AQ86UY5 434 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 CCDC17Q96LX7 622 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 RNF26Q9BY78 433 aaPredicted RBP16.79■□□□□ 0.28
COL4A6-206ENST00000477085 TAOK2Q9UL54 1235 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 ATP6V1DQ9Y5K8 247 aa16.79■□□□□ 0.28
COL4A6-206ENST00000477085 CNTNAP5Q8WYK1 1306 aa16.78■□□□□ 0.28
COL4A6-206ENST00000477085 GREB1LQ9C091 1923 aaPredicted RBP16.78■□□□□ 0.28
COL4A6-206ENST00000477085 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
COL4A6-206ENST00000477085 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
COL4A6-206ENST00000477085 PRPF3O43395 683 aaKnown RBP16.78■□□□□ 0.28
COL4A6-206ENST00000477085 MYO1BO43795 1136 aa16.78■□□□□ 0.28
COL4A6-206ENST00000477085 ZSCAN16Q9H4T2 348 aaPredicted RBP16.78■□□□□ 0.28
COL4A6-206ENST00000477085 TFIP11Q9UBB9 837 aaKnown RBP16.78■□□□□ 0.28
COL4A6-206ENST00000477085 CLIP2Q9UDT6 1046 aa16.78■□□□□ 0.28
COL4A6-206ENST00000477085 SBF1O95248 1867 aa16.78■□□□□ 0.28
COL4A6-206ENST00000477085 GOLGA6L22H0YM25 854 aa16.77■□□□□ 0.28
COL4A6-206ENST00000477085 CYTH3O43739 400 aa16.77■□□□□ 0.28
COL4A6-206ENST00000477085 GADD45BO75293 160 aaPredicted RBP16.77■□□□□ 0.28
COL4A6-206ENST00000477085 GDF11O95390 407 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms