RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 NAT10Q9H0A0 1025 aaKnown RBP13.24□□□□□ -0.29
NUP188-205ENST00000477069 IL17RBQ9NRM6 502 aa13.24□□□□□ -0.29
NUP188-205ENST00000477069 BBOX1O75936 387 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 TRIM37O94972 964 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 PTGS1P23219 599 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 GRIN1Q05586 938 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
NUP188-205ENST00000477069 GGA1Q9UJY5 639 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 PYCARDQ9ULZ3 195 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 NOLC1Q14978 699 aaKnown RBP eCLIP13.23□□□□□ -0.29
NUP188-205ENST00000477069 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
NUP188-205ENST00000477069 METTL16Q86W50 562 aaKnown RBP13.23□□□□□ -0.29
NUP188-205ENST00000477069 AOPEPQ8N6M6 819 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
NUP188-205ENST00000477069 SNED1Q8TER0 1413 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 KRT2P35908 639 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 TBC1D16Q8TBP0 767 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 KCNH3Q9ULD8 1083 aa13.23□□□□□ -0.29
NUP188-205ENST00000477069 FAM205CA6NFA0 338 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 TSPY2A6NKD2 308 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 BAG3O95817 575 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 USP5P45974 858 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 MDM2Q00987 491 aaPredicted RBP13.22□□□□□ -0.29
NUP188-205ENST00000477069 AKAP17AQ02040 695 aaKnown RBP13.22□□□□□ -0.29
NUP188-205ENST00000477069 NCAPHQ15003 741 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 KRBA2Q6ZNG9 492 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 CCDC186Q7Z3E2 898 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 DGKHQ86XP1 1220 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 TCP11L1Q9NUJ3 509 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 SRPRBQ9Y5M8 271 aaKnown RBP13.22□□□□□ -0.29
NUP188-205ENST00000477069 GPR75-ASB3A0A0A6YYF3 556 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 BECN2A8MW95 431 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 XBP1P17861 261 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 TXNRD1Q16881 649 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 CCDC144BQ3MJ40 725 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 CERS3Q8IU89 383 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 C17orf53Q8N3J3 647 aaPredicted RBP13.22□□□□□ -0.29
NUP188-205ENST00000477069 DYNLL2Q96FJ2 89 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 CABP5Q9NP86 173 aa13.22□□□□□ -0.29
NUP188-205ENST00000477069 ZNF646O15015 1829 aaPredicted RBP13.21□□□□□ -0.29
NUP188-205ENST00000477069 GAKO14976 1311 aa13.21□□□□□ -0.29
NUP188-205ENST00000477069 LDHCP07864 332 aa13.21□□□□□ -0.29
NUP188-205ENST00000477069 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.29
NUP188-205ENST00000477069 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
NUP188-205ENST00000477069 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.29
NUP188-205ENST00000477069 TFAP4Q01664 338 aa13.21□□□□□ -0.3
NUP188-205ENST00000477069 PNOCQ13519 176 aa13.21□□□□□ -0.3
NUP188-205ENST00000477069 FOXP4Q8IVH2 680 aaPredicted RBP13.21□□□□□ -0.3
NUP188-205ENST00000477069 TGFBRAP1Q8WUH2 860 aa13.21□□□□□ -0.3
NUP188-205ENST00000477069 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.3
NUP188-205ENST00000477069 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 ADAMTSL1Q8N6G6 1762 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 WNT7AO00755 349 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 PLCD1P51178 756 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 PFKFB3Q16875 520 aaPredicted RBP13.2□□□□□ -0.3
NUP188-205ENST00000477069 HSD3B7Q9H2F3 369 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 BIN1O00499 593 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 BTDP43251 543 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 RHBDL3P58872 404 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 SLC4A8Q2Y0W8 1093 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 TMC4Q7Z404 712 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 FBXW7Q969H0 707 aa13.2□□□□□ -0.3
NUP188-205ENST00000477069 TNS1Q9HBL0 1735 aaKnown RBP13.2□□□□□ -0.3
NUP188-205ENST00000477069 IKBKBO14920 756 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 SCG2P13521 617 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 GRM4Q14833 912 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
NUP188-205ENST00000477069 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
NUP188-205ENST00000477069 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 TPM2P07951 284 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 RASA1P20936 1047 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 LRMPQ12912 555 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 NT5DC1Q5TFE4 455 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 SP8Q8IXZ3 490 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 R3HCC1Q9Y3T6 440 aaKnown RBP13.19□□□□□ -0.3
NUP188-205ENST00000477069 TRIM75PA6NK02 468 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
NUP188-205ENST00000477069 VEGFAP15692 232 aaPredicted RBP13.19□□□□□ -0.3
NUP188-205ENST00000477069 SLC44A5Q8NCS7 719 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 CNNM3Q8NE01 707 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 NOL10Q9BSC4 688 aaKnown RBP13.19□□□□□ -0.3
NUP188-205ENST00000477069 KAT14Q9H8E8 782 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 MYH8P13535 1937 aa13.19□□□□□ -0.3
NUP188-205ENST00000477069 FLT1P17948 1338 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 SOCS7O14512 581 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 ADAMTS3O15072 1205 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 FOXN1O15353 648 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
NUP188-205ENST00000477069 KIF5BP33176 963 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 SLC35G1Q2M3R5 365 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 CCDC178Q5BJE1 867 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 C16orf86Q6ZW13 317 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms