RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 PTPREP23469 700 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 CYP2C19P33261 490 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 ADCYAP1R1P41586 468 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 GRB14Q14449 540 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 RAB30Q15771 203 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 CCDC85BQ15834 202 aaPredicted RBP9.14□□□□□ -0.95
PRPF3-205ENST00000476970 CCDC27Q2M243 656 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 Q3C1V9 767 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 SLC4A10Q6U841 1118 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 ALYREFQ86V81 257 aaKnown RBP9.14□□□□□ -0.95
PRPF3-205ENST00000476970 KAZALD1Q96I82 304 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 PBX4Q9BYU1 374 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 MSRAQ9UJ68 235 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 SIPA1L1O43166 1804 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 LRRC37A2A6NM11 1700 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 PDS5AQ29RF7 1337 aaKnown RBP9.13□□□□□ -0.95
PRPF3-205ENST00000476970 FOCADQ5VW36 1801 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 SPDYE4A6NLX3 237 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 EYA2O00167 538 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 NBPF7P0C2Y1 421 aaPredicted RBP9.13□□□□□ -0.95
PRPF3-205ENST00000476970 EPHB4P54760 987 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 PPIGQ13427 754 aaKnown RBP eCLIP9.13□□□□□ -0.95
PRPF3-205ENST00000476970 LRRC41Q15345 812 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 ATP2B3Q16720 1220 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 OLFML2BQ68BL8 750 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 ANKRD44Q8N8A2 993 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 TRPV1Q8NER1 839 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 FERMT2Q96AC1 680 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 NECAB3Q96P71 396 aaPredicted RBP9.13□□□□□ -0.95
PRPF3-205ENST00000476970 TRIM34Q9BYJ4 488 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 TMEM39AQ9NV64 488 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 SLC5A4Q9NY91 659 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 ABCF2Q9UG63 623 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 SMCHD1A6NHR9 2005 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 CACNA1AO00555 2505 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 CDK5RAP2Q96SN8 1893 aa9.13□□□□□ -0.95
PRPF3-205ENST00000476970 CHD7Q9P2D1 2997 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 FANCIQ9NVI1 1328 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 GPR75-ASB3A0A0A6YYF3 556 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 DCDC2CA8MYV0 355 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 PQBP1O60828 265 aaKnown RBP9.12□□□□□ -0.95
PRPF3-205ENST00000476970 GPR37L1O60883 481 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 BMP1P13497 986 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 ITGB8P26012 769 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 RHBDL3P58872 404 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 GSTO1P78417 241 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 PSRC1Q6PGN9 363 aaPredicted RBP9.12□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L2Q6R6M4 530 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 RNF180Q86T96 592 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 DPP9Q86TI2 863 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 SLC44A5Q8NCS7 719 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 KLHDC4Q8TBB5 520 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 MTIF3Q9H2K0 278 aaKnown RBP9.12□□□□□ -0.95
PRPF3-205ENST00000476970 DHX36Q9H2U1 1008 aaKnown RBP9.12□□□□□ -0.95
PRPF3-205ENST00000476970 FBXO3Q9UK99 471 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 PHF24Q9UPV7 400 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 PRRC2BQ5JSZ5 2229 aaKnown RBP9.12□□□□□ -0.95
PRPF3-205ENST00000476970 XIRP2A4UGR9 3374 aa9.12□□□□□ -0.95
PRPF3-205ENST00000476970 TRANK1O15050 2925 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L15C9J2P7 530 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L13C9JLJ4 530 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L11C9JVI0 530 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L18D6R9N7 530 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L22D6RA61 530 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L17D6RBQ6 530 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L19D6RCP7 530 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L20D6RJB6 530 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 VAMP4O75379 141 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 LDHCP07864 332 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 USP17L24Q0WX57 530 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 ADGRE1Q14246 886 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 ANO1Q5XXA6 986 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 ERICH6Q7L0X2 663 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 NPLOC4Q8TAT6 608 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 HERVK_113Q902F9 699 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 TOX2Q96NM4 488 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 FEZ1Q99689 392 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.11□□□□□ -0.95
PRPF3-205ENST00000476970 EPHX3Q9H6B9 360 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 SLC28A3Q9HAS3 691 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 CEP126Q9P2H0 1117 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 PI4KBQ9UBF8 816 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 NDUFB9Q9Y6M9 179 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 ZNFX1Q9P2E3 1918 aaKnown RBP9.11□□□□□ -0.95
PRPF3-205ENST00000476970 ROBO3Q96MS0 1386 aa9.11□□□□□ -0.95
PRPF3-205ENST00000476970 MROH7Q68CQ1 1323 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 REV3LO60673 3130 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 ERC2O15083 957 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 STRNO43815 780 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 CNMDO75829 334 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 TIMP1P01033 207 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 IGHA2P01877 340 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 RARBP10826 455 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 PBX2P40425 430 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 PHKA1P46020 1223 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 MRE11P49959 708 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 USP14P54578 494 aa9.1□□□□□ -0.95
PRPF3-205ENST00000476970 RRP1BQ14684 758 aaKnown RBP9.1□□□□□ -0.95
PRPF3-205ENST00000476970 SKIV2LQ15477 1246 aaKnown RBP9.1□□□□□ -0.95
PRPF3-205ENST00000476970 FAM47AQ5JRC9 791 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms