RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 SENP6Q9GZR1 1112 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-219ENST00000476625 CYP2C19P33261 490 aa14.67□□□□□ -0.06
HDAC6-219ENST00000476625 MAP2K5Q13163 448 aa14.67□□□□□ -0.06
HDAC6-219ENST00000476625 OS9Q13438 667 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-219ENST00000476625 RAB3GAP1Q15042 981 aa14.67□□□□□ -0.06
HDAC6-219ENST00000476625 FOXP4Q8IVH2 680 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-219ENST00000476625 CCAR1Q8IX12 1150 aaKnown RBP14.67□□□□□ -0.06
HDAC6-219ENST00000476625 FEZ1Q99689 392 aa14.67□□□□□ -0.06
HDAC6-219ENST00000476625 CWC22Q9HCG8 908 aaKnown RBP14.67□□□□□ -0.06
HDAC6-219ENST00000476625 STXBP5LQ9Y2K9 1186 aa14.67□□□□□ -0.06
HDAC6-219ENST00000476625 ZNF236Q9UL36 1845 aa14.66□□□□□ -0.06
HDAC6-219ENST00000476625 IDH1O75874 414 aaKnown RBP14.66□□□□□ -0.06
HDAC6-219ENST00000476625 CAPN2P17655 700 aa14.66□□□□□ -0.06
HDAC6-219ENST00000476625 CNGA1P29973 690 aa14.66□□□□□ -0.06
HDAC6-219ENST00000476625 GUCY1A2P33402 732 aa14.66□□□□□ -0.06
HDAC6-219ENST00000476625 ATF7IPQ6VMQ6 1270 aa14.66□□□□□ -0.06
HDAC6-219ENST00000476625 MAGEB6Q8N7X4 407 aa14.66□□□□□ -0.06
HDAC6-219ENST00000476625 EAF2Q96CJ1 260 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-219ENST00000476625 COL25A1Q9BXS0 654 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-219ENST00000476625 BAZ2AQ9UIF9 1905 aaKnown RBP14.66□□□□□ -0.06
HDAC6-219ENST00000476625 ZNFX1Q9P2E3 1918 aaKnown RBP14.65□□□□□ -0.06
HDAC6-219ENST00000476625 SMIM22K7EJ46 135 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 SURF6O75683 361 aaKnown RBP14.65□□□□□ -0.06
HDAC6-219ENST00000476625 PLCG2P16885 1265 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 VCAM1P19320 739 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 SHMT1P34896 483 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 USP5P45974 858 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 PLCD1P51178 756 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 KIAA1755Q5JYT7 1200 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 CCDC158Q5M9N0 1113 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 GJC2Q5T442 439 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-219ENST00000476625 TATDN1Q6P1N9 297 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 CLEC10AQ8IUN9 316 aa14.65□□□□□ -0.06
HDAC6-219ENST00000476625 EDC3Q96F86 508 aaKnown RBP14.65□□□□□ -0.06
HDAC6-219ENST00000476625 RPAP3Q9H6T3 665 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-219ENST00000476625 PLXNA1Q9UIW2 1896 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 SPDYE16A6NNV3 312 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-219ENST00000476625 USP17L15C9J2P7 530 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 USP17L13C9JLJ4 530 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 USP17L11C9JVI0 530 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 USP17L18D6R9N7 530 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 USP17L22D6RA61 530 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 USP17L17D6RBQ6 530 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 USP17L19D6RCP7 530 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 USP17L20D6RJB6 530 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 HLA-DOAP06340 250 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 PTPREP23469 700 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 USP17L24Q0WX57 530 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 SLFNL1Q499Z3 407 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 CATSPERGQ6ZRH7 1159 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 SSH3Q8TE77 659 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 C12orf42Q96LP6 360 aa14.64□□□□□ -0.07
HDAC6-219ENST00000476625 DDX20Q9UHI6 824 aaKnown RBP14.64□□□□□ -0.07
HDAC6-219ENST00000476625 DNAH12Q6ZR08 3092 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 A0A1W2PRG0 241 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 CYP2D6P10635 497 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 RLBP1P12271 317 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 RTP1P59025 263 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 ATP8B2P98198 1209 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 SEPT2Q15019 361 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 ABCB5Q2M3G0 1257 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 PRAMEF19Q5SWL8 479 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 C9orf50Q5SZB4 431 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 GPR108Q9NPR9 543 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 RABGAP1Q9Y3P9 1069 aa14.63□□□□□ -0.07
HDAC6-219ENST00000476625 UNC80Q8N2C7 3258 aa14.62□□□□□ -0.07
HDAC6-219ENST00000476625 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-219ENST00000476625 GRB14Q14449 540 aa14.62□□□□□ -0.07
HDAC6-219ENST00000476625 CERKLQ49MI3 558 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-219ENST00000476625 TRMT44Q8IYL2 757 aaKnown RBP14.62□□□□□ -0.07
HDAC6-219ENST00000476625 BCL11AQ9H165 835 aa14.62□□□□□ -0.07
HDAC6-219ENST00000476625 SERPINB13Q9UIV8 391 aa14.62□□□□□ -0.07
HDAC6-219ENST00000476625 ATP11BQ9Y2G3 1177 aa14.62□□□□□ -0.07
HDAC6-219ENST00000476625 SLC15A5A6NIM6 579 aa14.61□□□□□ -0.07
HDAC6-219ENST00000476625 POTEB2H3BUK9 544 aa14.61□□□□□ -0.07
HDAC6-219ENST00000476625 CYBAP13498 195 aa14.61□□□□□ -0.07
HDAC6-219ENST00000476625 ATP2B2Q01814 1243 aa14.61□□□□□ -0.07
HDAC6-219ENST00000476625 MFSD14CQ5VZR4 134 aa14.61□□□□□ -0.07
HDAC6-219ENST00000476625 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-219ENST00000476625 SH3RF1Q7Z6J0 888 aa14.61□□□□□ -0.07
HDAC6-219ENST00000476625 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC6-219ENST00000476625 RIOK1Q9BRS2 568 aaKnown RBP14.61□□□□□ -0.07
HDAC6-219ENST00000476625 MOV10L1Q9BXT6 1211 aaKnown RBP14.61□□□□□ -0.07
HDAC6-219ENST00000476625 KIAA1683Q9H0B3 1180 aa14.61□□□□□ -0.07
HDAC6-219ENST00000476625 PRDM5Q9NQX1 630 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-219ENST00000476625 EXOC6BQ9Y2D4 811 aa14.61□□□□□ -0.07
HDAC6-219ENST00000476625 EYSQ5T1H1 3165 aa14.61□□□□□ -0.07
HDAC6-219ENST00000476625 COBLO75128 1261 aa14.6□□□□□ -0.07
HDAC6-219ENST00000476625 IGHA2P01877 340 aa14.6□□□□□ -0.07
HDAC6-219ENST00000476625 CHGBP05060 677 aa14.6□□□□□ -0.07
HDAC6-219ENST00000476625 SHHQ15465 462 aa14.6□□□□□ -0.07
HDAC6-219ENST00000476625 SDR42E1Q8WUS8 393 aa14.6□□□□□ -0.07
HDAC6-219ENST00000476625 FERMT2Q96AC1 680 aa14.6□□□□□ -0.07
HDAC6-219ENST00000476625 ZNF512BQ96KM6 892 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-219ENST00000476625 EHD4Q9H223 541 aa14.6□□□□□ -0.07
HDAC6-219ENST00000476625 GINM1Q9NU53 330 aa14.6□□□□□ -0.07
HDAC6-219ENST00000476625 SMCHD1A6NHR9 2005 aa14.59□□□□□ -0.07
HDAC6-219ENST00000476625 MPHOSPH10O00566 681 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms